BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmmt25c19
(479 letters)
Database: mosquito
2352 sequences; 563,979 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF283268-1|AAG15373.1| 46|Anopheles gambiae ribosomal protein ... 69 8e-14
AJ439353-8|CAD27930.1| 1039|Anopheles gambiae putative DNA topoi... 26 0.77
AY334007-1|AAR01132.1| 202|Anopheles gambiae odorant receptor 1... 24 2.4
AY334006-1|AAR01131.1| 202|Anopheles gambiae odorant receptor 1... 24 2.4
AY334005-1|AAR01130.1| 202|Anopheles gambiae odorant receptor 1... 24 2.4
AF444781-1|AAL37902.1| 1459|Anopheles gambiae Toll6 protein. 24 2.4
U89803-1|AAD03794.1| 250|Anopheles gambiae Tc1-like transposase... 24 3.1
AJ276428-1|CAB81934.1| 1322|Anopheles gambiae adhesive serine pr... 23 4.1
AF117751-1|AAD38337.3| 1322|Anopheles gambiae serine protease 22... 23 4.1
DQ342048-1|ABC69940.1| 847|Anopheles gambiae STIP protein. 23 5.4
AY176051-1|AAO19582.1| 522|Anopheles gambiae cytochrome P450 CY... 23 7.2
AF364130-1|AAL35506.1| 417|Anopheles gambiae putative odorant r... 23 7.2
AF043443-1|AAC05668.1| 232|Anopheles gambiae putative pupal-spe... 22 9.5
AF043442-1|AAC05667.1| 231|Anopheles gambiae putative pupal-spe... 22 9.5
AF043441-1|AAC05666.1| 231|Anopheles gambiae putative pupal-spe... 22 9.5
AF043440-1|AAC05665.1| 234|Anopheles gambiae putative pupal-spe... 22 9.5
AF043439-1|AAC05664.1| 239|Anopheles gambiae putative pupal-spe... 22 9.5
AF043438-1|AAC05663.1| 231|Anopheles gambiae putative pupal-spe... 22 9.5
AF043437-1|AAC05662.1| 239|Anopheles gambiae putative pupal-spe... 22 9.5
AF043436-1|AAC05661.1| 263|Anopheles gambiae putative pupal-spe... 22 9.5
AF043435-1|AAC05660.1| 231|Anopheles gambiae pupal-specific cut... 22 9.5
AF043434-1|AAC05659.1| 232|Anopheles gambiae putative pupal-spe... 22 9.5
AF043433-3|AAC05658.1| 231|Anopheles gambiae putative pupal-spe... 22 9.5
AF043433-2|AAC05657.1| 239|Anopheles gambiae putative pupal-spe... 22 9.5
AF043433-1|AAC05656.1| 231|Anopheles gambiae putative pupal-spe... 22 9.5
>AF283268-1|AAG15373.1| 46|Anopheles gambiae ribosomal protein S18
protein.
Length = 46
Score = 68.9 bits (161), Expect = 8e-14
Identities = 30/34 (88%), Positives = 31/34 (91%)
Frame = +3
Query: 378 LREDLERLKKIXAXRGMRHYWGLRVRGQHTXTTG 479
LREDLERLK+I A RGMRHYWGLRVRGQHT TTG
Sbjct: 1 LREDLERLKRIHAHRGMRHYWGLRVRGQHTKTTG 34
>AJ439353-8|CAD27930.1| 1039|Anopheles gambiae putative DNA
topoisomerase protein.
Length = 1039
Score = 25.8 bits (54), Expect = 0.77
Identities = 14/51 (27%), Positives = 26/51 (50%), Gaps = 1/51 (1%)
Frame = +3
Query: 177 YSNIVLKKADIDLDKRAGECTEEEV-EKIITIMSNPRQYKIPDWFLNRXKD 326
Y+ IVL +A + LDK +C + + +II + +Y+ W + +D
Sbjct: 534 YAYIVLVQAVLPLDKNLNDCNRQSILGRIIRVTDEVIEYR--KWIKDTFED 582
>AY334007-1|AAR01132.1| 202|Anopheles gambiae odorant receptor 1
protein.
Length = 202
Score = 24.2 bits (50), Expect = 2.4
Identities = 12/31 (38%), Positives = 18/31 (58%)
Frame = -2
Query: 316 LFRNQSGILYCLGFDMIVIIFSTSSSVHSPA 224
+ R+ SG+ + + F M V IF+ V SPA
Sbjct: 93 VLRSMSGVFWLMIFLMFVAIFTIIMWVMSPA 123
>AY334006-1|AAR01131.1| 202|Anopheles gambiae odorant receptor 1
protein.
Length = 202
Score = 24.2 bits (50), Expect = 2.4
Identities = 12/31 (38%), Positives = 18/31 (58%)
Frame = -2
Query: 316 LFRNQSGILYCLGFDMIVIIFSTSSSVHSPA 224
+ R+ SG+ + + F M V IF+ V SPA
Sbjct: 93 VLRSMSGVFWLMIFLMFVAIFTIIMWVMSPA 123
>AY334005-1|AAR01130.1| 202|Anopheles gambiae odorant receptor 1
protein.
Length = 202
Score = 24.2 bits (50), Expect = 2.4
Identities = 12/31 (38%), Positives = 18/31 (58%)
Frame = -2
Query: 316 LFRNQSGILYCLGFDMIVIIFSTSSSVHSPA 224
+ R+ SG+ + + F M V IF+ V SPA
Sbjct: 93 VLRSMSGVFWLMIFLMFVAIFTIIMWVMSPA 123
>AF444781-1|AAL37902.1| 1459|Anopheles gambiae Toll6 protein.
Length = 1459
Score = 24.2 bits (50), Expect = 2.4
Identities = 9/36 (25%), Positives = 21/36 (58%)
Frame = +3
Query: 63 SLVIPDXFQHILRIMNTNIDGKRKVMFAMTAIKGVG 170
S ++P+ F H+ R+ +++ + F+ T + G+G
Sbjct: 106 SKLLPNSFVHLARLKALSLEFCKIAKFSSTVLAGLG 141
>U89803-1|AAD03794.1| 250|Anopheles gambiae Tc1-like transposase
protein.
Length = 250
Score = 23.8 bits (49), Expect = 3.1
Identities = 8/31 (25%), Positives = 17/31 (54%)
Frame = -1
Query: 149 HRKHNLAFAIDVRIHDTKNMLKXVWNDQRHF 57
H+ + FAI+ D ++ + +W+D+ F
Sbjct: 38 HKNARVLFAIEHMFFDEEDWRRVLWSDESKF 68
>AJ276428-1|CAB81934.1| 1322|Anopheles gambiae adhesive serine
protease protein.
Length = 1322
Score = 23.4 bits (48), Expect = 4.1
Identities = 9/13 (69%), Positives = 10/13 (76%)
Frame = +2
Query: 119 RWQTQGYVCDDGY 157
RW GYVCDDG+
Sbjct: 787 RW---GYVCDDGF 796
>AF117751-1|AAD38337.3| 1322|Anopheles gambiae serine protease 22D
protein.
Length = 1322
Score = 23.4 bits (48), Expect = 4.1
Identities = 9/13 (69%), Positives = 10/13 (76%)
Frame = +2
Query: 119 RWQTQGYVCDDGY 157
RW GYVCDDG+
Sbjct: 786 RW---GYVCDDGF 795
>DQ342048-1|ABC69940.1| 847|Anopheles gambiae STIP protein.
Length = 847
Score = 23.0 bits (47), Expect = 5.4
Identities = 9/22 (40%), Positives = 14/22 (63%)
Frame = -1
Query: 338 TINNILXPI*EPVWYLILPRIR 273
T+N++L P VW ++P IR
Sbjct: 487 TVNSLLDPYSAVVWSGVVPSIR 508
>AY176051-1|AAO19582.1| 522|Anopheles gambiae cytochrome P450
CYP12F1 protein.
Length = 522
Score = 22.6 bits (46), Expect = 7.2
Identities = 18/54 (33%), Positives = 29/54 (53%), Gaps = 3/54 (5%)
Frame = +3
Query: 273 SNPRQYK-IPD-WFLNRXKDIVDG-KYSQLTSSNLDSKLREDLERLKKIXAXRG 425
SN + YK IP L K+ +G +Y +LT ++L ++ R+D L +I G
Sbjct: 39 SNAKPYKAIPSPKLLAFAKEFKEGGRYYELTGADLFARWRQDYGDLIRIKGMFG 92
>AF364130-1|AAL35506.1| 417|Anopheles gambiae putative odorant
receptor Or1 protein.
Length = 417
Score = 22.6 bits (46), Expect = 7.2
Identities = 11/31 (35%), Positives = 18/31 (58%)
Frame = -2
Query: 316 LFRNQSGILYCLGFDMIVIIFSTSSSVHSPA 224
+ ++ SG+ + + F M V IF+ V SPA
Sbjct: 127 VLQSMSGVFWLMIFLMFVAIFTIIMWVMSPA 157
>AF043443-1|AAC05668.1| 232|Anopheles gambiae putative
pupal-specific cuticular proteinCP2d protein.
Length = 232
Score = 22.2 bits (45), Expect = 9.5
Identities = 10/16 (62%), Positives = 11/16 (68%)
Frame = -2
Query: 262 IIFSTSSSVHSPARLS 215
I STSS VH P+ LS
Sbjct: 213 IAHSTSSIVHGPSHLS 228
>AF043442-1|AAC05667.1| 231|Anopheles gambiae putative
pupal-specific cuticular proteinCP2c protein.
Length = 231
Score = 22.2 bits (45), Expect = 9.5
Identities = 10/16 (62%), Positives = 11/16 (68%)
Frame = -2
Query: 262 IIFSTSSSVHSPARLS 215
I STSS VH P+ LS
Sbjct: 212 IAHSTSSIVHGPSHLS 227
>AF043441-1|AAC05666.1| 231|Anopheles gambiae putative
pupal-specific cuticular proteinCP2b protein.
Length = 231
Score = 22.2 bits (45), Expect = 9.5
Identities = 10/16 (62%), Positives = 11/16 (68%)
Frame = -2
Query: 262 IIFSTSSSVHSPARLS 215
I STSS VH P+ LS
Sbjct: 212 IAHSTSSIVHGPSHLS 227
>AF043440-1|AAC05665.1| 234|Anopheles gambiae putative
pupal-specific cuticular proteinCP2d protein.
Length = 234
Score = 22.2 bits (45), Expect = 9.5
Identities = 10/16 (62%), Positives = 11/16 (68%)
Frame = -2
Query: 262 IIFSTSSSVHSPARLS 215
I STSS VH P+ LS
Sbjct: 215 IAHSTSSIVHGPSHLS 230
>AF043439-1|AAC05664.1| 239|Anopheles gambiae putative
pupal-specific cuticular proteinCP2b protein.
Length = 239
Score = 22.2 bits (45), Expect = 9.5
Identities = 10/16 (62%), Positives = 11/16 (68%)
Frame = -2
Query: 262 IIFSTSSSVHSPARLS 215
I STSS VH P+ LS
Sbjct: 220 IAHSTSSIVHGPSHLS 235
>AF043438-1|AAC05663.1| 231|Anopheles gambiae putative
pupal-specific cuticular proteinCP2b protein.
Length = 231
Score = 22.2 bits (45), Expect = 9.5
Identities = 10/16 (62%), Positives = 11/16 (68%)
Frame = -2
Query: 262 IIFSTSSSVHSPARLS 215
I STSS VH P+ LS
Sbjct: 212 IAHSTSSIVHGPSHLS 227
>AF043437-1|AAC05662.1| 239|Anopheles gambiae putative
pupal-specific cuticular proteinCP2b protein.
Length = 239
Score = 22.2 bits (45), Expect = 9.5
Identities = 10/16 (62%), Positives = 11/16 (68%)
Frame = -2
Query: 262 IIFSTSSSVHSPARLS 215
I STSS VH P+ LS
Sbjct: 220 IAHSTSSIVHGPSHLS 235
>AF043436-1|AAC05661.1| 263|Anopheles gambiae putative
pupal-specific cuticular proteinCP2c protein.
Length = 263
Score = 22.2 bits (45), Expect = 9.5
Identities = 10/16 (62%), Positives = 11/16 (68%)
Frame = -2
Query: 262 IIFSTSSSVHSPARLS 215
I STSS VH P+ LS
Sbjct: 244 IAHSTSSIVHGPSHLS 259
>AF043435-1|AAC05660.1| 231|Anopheles gambiae pupal-specific
cuticular protein CP2b protein.
Length = 231
Score = 22.2 bits (45), Expect = 9.5
Identities = 10/16 (62%), Positives = 11/16 (68%)
Frame = -2
Query: 262 IIFSTSSSVHSPARLS 215
I STSS VH P+ LS
Sbjct: 212 IAHSTSSIVHGPSHLS 227
>AF043434-1|AAC05659.1| 232|Anopheles gambiae putative
pupal-specific cuticular proteinCP2d protein.
Length = 232
Score = 22.2 bits (45), Expect = 9.5
Identities = 10/16 (62%), Positives = 11/16 (68%)
Frame = -2
Query: 262 IIFSTSSSVHSPARLS 215
I STSS VH P+ LS
Sbjct: 213 IAHSTSSIVHGPSHLS 228
>AF043433-3|AAC05658.1| 231|Anopheles gambiae putative
pupal-specific cuticular proteinprotein.
Length = 231
Score = 22.2 bits (45), Expect = 9.5
Identities = 10/16 (62%), Positives = 11/16 (68%)
Frame = -2
Query: 262 IIFSTSSSVHSPARLS 215
I STSS VH P+ LS
Sbjct: 212 IAHSTSSIVHGPSHLS 227
>AF043433-2|AAC05657.1| 239|Anopheles gambiae putative
pupal-specific cuticular proteinprotein.
Length = 239
Score = 22.2 bits (45), Expect = 9.5
Identities = 10/16 (62%), Positives = 11/16 (68%)
Frame = -2
Query: 262 IIFSTSSSVHSPARLS 215
I STSS VH P+ LS
Sbjct: 220 IAHSTSSIVHGPSHLS 235
>AF043433-1|AAC05656.1| 231|Anopheles gambiae putative
pupal-specific cuticular proteinprotein.
Length = 231
Score = 22.2 bits (45), Expect = 9.5
Identities = 10/16 (62%), Positives = 11/16 (68%)
Frame = -2
Query: 262 IIFSTSSSVHSPARLS 215
I STSS VH P+ LS
Sbjct: 212 IAHSTSSIVHGPSHLS 227
Database: mosquito
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 563,979
Number of sequences in database: 2352
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 483,686
Number of Sequences: 2352
Number of extensions: 9117
Number of successful extensions: 32
Number of sequences better than 10.0: 25
Number of HSP's better than 10.0 without gapping: 31
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 32
length of database: 563,979
effective HSP length: 60
effective length of database: 422,859
effective search space used: 41863041
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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