Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmmt25c19
         (479 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

L22959-1|AAA28870.1|  152|Drosophila melanogaster ribosomal prot...   257   7e-69
BT024929-1|ABE01159.1|  152|Drosophila melanogaster IP16603p pro...   257   7e-69
AE013599-2985|AAM68401.1|  152|Drosophila melanogaster CG8900-PB...   257   7e-69
AE013599-2984|AAF57491.1|  152|Drosophila melanogaster CG8900-PA...   257   7e-69
AY118434-1|AAM48463.1|  152|Drosophila melanogaster RH43343p pro...   254   6e-68
BT022499-1|AAY54915.1|  246|Drosophila melanogaster IP07925p pro...    92   3e-19
BT016037-1|AAV36922.1|  447|Drosophila melanogaster LP23579p pro...    28   7.6  
AE014298-2418|AAF48619.1|  454|Drosophila melanogaster CG9903-PA...    28   7.6  

>L22959-1|AAA28870.1|  152|Drosophila melanogaster ribosomal protein
           S18 protein.
          Length = 152

 Score =  257 bits (629), Expect = 7e-69
 Identities = 118/140 (84%), Positives = 130/140 (92%)
 Frame = +3

Query: 60  MSLVIPDXFQHILRIMNTNIDGKRKVMFAMTAIKGVGRRYSNIVLKKADIDLDKRAGECT 239
           MSLVIP+ FQHILRIMNTNIDGKRKV  AMTAIKGVGRRYSNIVLKKAD+DL KRAGECT
Sbjct: 1   MSLVIPEKFQHILRIMNTNIDGKRKVGIAMTAIKGVGRRYSNIVLKKADVDLTKRAGECT 60

Query: 240 EEEVEKIITIMSNPRQYKIPDWFLNRXKDIVDGKYSQLTSSNLDSKLREDLERLKKIXAX 419
           EEEV+K++TI+SNP QYK+P+WFLNR KDI+DGKY QLTSSNLDSKLR+DLERLKKI + 
Sbjct: 61  EEEVDKVVTIISNPLQYKVPNWFLNRQKDIIDGKYWQLTSSNLDSKLRDDLERLKKIRSH 120

Query: 420 RGMRHYWGLRVRGQHTXTTG 479
           RG+RHYWGLRVRGQHT TTG
Sbjct: 121 RGLRHYWGLRVRGQHTKTTG 140


>BT024929-1|ABE01159.1|  152|Drosophila melanogaster IP16603p
           protein.
          Length = 152

 Score =  257 bits (629), Expect = 7e-69
 Identities = 118/140 (84%), Positives = 130/140 (92%)
 Frame = +3

Query: 60  MSLVIPDXFQHILRIMNTNIDGKRKVMFAMTAIKGVGRRYSNIVLKKADIDLDKRAGECT 239
           MSLVIP+ FQHILRIMNTNIDGKRKV  AMTAIKGVGRRYSNIVLKKAD+DL KRAGECT
Sbjct: 1   MSLVIPEKFQHILRIMNTNIDGKRKVGIAMTAIKGVGRRYSNIVLKKADVDLTKRAGECT 60

Query: 240 EEEVEKIITIMSNPRQYKIPDWFLNRXKDIVDGKYSQLTSSNLDSKLREDLERLKKIXAX 419
           EEEV+K++TI+SNP QYK+P+WFLNR KDI+DGKY QLTSSNLDSKLR+DLERLKKI + 
Sbjct: 61  EEEVDKVVTIISNPLQYKVPNWFLNRQKDIIDGKYWQLTSSNLDSKLRDDLERLKKIRSH 120

Query: 420 RGMRHYWGLRVRGQHTXTTG 479
           RG+RHYWGLRVRGQHT TTG
Sbjct: 121 RGLRHYWGLRVRGQHTKTTG 140


>AE013599-2985|AAM68401.1|  152|Drosophila melanogaster CG8900-PB,
           isoform B protein.
          Length = 152

 Score =  257 bits (629), Expect = 7e-69
 Identities = 118/140 (84%), Positives = 130/140 (92%)
 Frame = +3

Query: 60  MSLVIPDXFQHILRIMNTNIDGKRKVMFAMTAIKGVGRRYSNIVLKKADIDLDKRAGECT 239
           MSLVIP+ FQHILRIMNTNIDGKRKV  AMTAIKGVGRRYSNIVLKKAD+DL KRAGECT
Sbjct: 1   MSLVIPEKFQHILRIMNTNIDGKRKVGIAMTAIKGVGRRYSNIVLKKADVDLTKRAGECT 60

Query: 240 EEEVEKIITIMSNPRQYKIPDWFLNRXKDIVDGKYSQLTSSNLDSKLREDLERLKKIXAX 419
           EEEV+K++TI+SNP QYK+P+WFLNR KDI+DGKY QLTSSNLDSKLR+DLERLKKI + 
Sbjct: 61  EEEVDKVVTIISNPLQYKVPNWFLNRQKDIIDGKYWQLTSSNLDSKLRDDLERLKKIRSH 120

Query: 420 RGMRHYWGLRVRGQHTXTTG 479
           RG+RHYWGLRVRGQHT TTG
Sbjct: 121 RGLRHYWGLRVRGQHTKTTG 140


>AE013599-2984|AAF57491.1|  152|Drosophila melanogaster CG8900-PA,
           isoform A protein.
          Length = 152

 Score =  257 bits (629), Expect = 7e-69
 Identities = 118/140 (84%), Positives = 130/140 (92%)
 Frame = +3

Query: 60  MSLVIPDXFQHILRIMNTNIDGKRKVMFAMTAIKGVGRRYSNIVLKKADIDLDKRAGECT 239
           MSLVIP+ FQHILRIMNTNIDGKRKV  AMTAIKGVGRRYSNIVLKKAD+DL KRAGECT
Sbjct: 1   MSLVIPEKFQHILRIMNTNIDGKRKVGIAMTAIKGVGRRYSNIVLKKADVDLTKRAGECT 60

Query: 240 EEEVEKIITIMSNPRQYKIPDWFLNRXKDIVDGKYSQLTSSNLDSKLREDLERLKKIXAX 419
           EEEV+K++TI+SNP QYK+P+WFLNR KDI+DGKY QLTSSNLDSKLR+DLERLKKI + 
Sbjct: 61  EEEVDKVVTIISNPLQYKVPNWFLNRQKDIIDGKYWQLTSSNLDSKLRDDLERLKKIRSH 120

Query: 420 RGMRHYWGLRVRGQHTXTTG 479
           RG+RHYWGLRVRGQHT TTG
Sbjct: 121 RGLRHYWGLRVRGQHTKTTG 140


>AY118434-1|AAM48463.1|  152|Drosophila melanogaster RH43343p
           protein.
          Length = 152

 Score =  254 bits (621), Expect = 6e-68
 Identities = 117/140 (83%), Positives = 129/140 (92%)
 Frame = +3

Query: 60  MSLVIPDXFQHILRIMNTNIDGKRKVMFAMTAIKGVGRRYSNIVLKKADIDLDKRAGECT 239
           MSLVIP+ FQ ILRIMNTNIDGKRKV  AMTAIKGVGRRYSNIVLKKAD+DL KRAGECT
Sbjct: 1   MSLVIPEKFQRILRIMNTNIDGKRKVGIAMTAIKGVGRRYSNIVLKKADVDLTKRAGECT 60

Query: 240 EEEVEKIITIMSNPRQYKIPDWFLNRXKDIVDGKYSQLTSSNLDSKLREDLERLKKIXAX 419
           EEEV+K++TI+SNP QYK+P+WFLNR KDI+DGKY QLTSSNLDSKLR+DLERLKKI + 
Sbjct: 61  EEEVDKVVTIISNPLQYKVPNWFLNRQKDIIDGKYWQLTSSNLDSKLRDDLERLKKIRSH 120

Query: 420 RGMRHYWGLRVRGQHTXTTG 479
           RG+RHYWGLRVRGQHT TTG
Sbjct: 121 RGLRHYWGLRVRGQHTKTTG 140


>BT022499-1|AAY54915.1|  246|Drosophila melanogaster IP07925p
           protein.
          Length = 246

 Score = 92.3 bits (219), Expect = 3e-19
 Identities = 40/48 (83%), Positives = 46/48 (95%)
 Frame = +3

Query: 156 IKGVGRRYSNIVLKKADIDLDKRAGECTEEEVEKIITIMSNPRQYKIP 299
           IKGVGRRYSNIVLKKAD+DL KRAGECTEEEV+K++TI+SNP QYK+P
Sbjct: 1   IKGVGRRYSNIVLKKADVDLTKRAGECTEEEVDKVVTIISNPLQYKVP 48


>BT016037-1|AAV36922.1|  447|Drosophila melanogaster LP23579p
           protein.
          Length = 447

 Score = 27.9 bits (59), Expect = 7.6
 Identities = 12/30 (40%), Positives = 19/30 (63%)
 Frame = -1

Query: 350 LAVFTINNILXPI*EPVWYLILPRIRHDSD 261
           +A  TIN++L     P+W L+L RI ++ D
Sbjct: 237 VATTTINSLLALALLPIWILVLGRILYEDD 266


>AE014298-2418|AAF48619.1|  454|Drosophila melanogaster CG9903-PA
           protein.
          Length = 454

 Score = 27.9 bits (59), Expect = 7.6
 Identities = 12/30 (40%), Positives = 19/30 (63%)
 Frame = -1

Query: 350 LAVFTINNILXPI*EPVWYLILPRIRHDSD 261
           +A  TIN++L     P+W L+L RI ++ D
Sbjct: 244 VATTTINSLLALALLPIWILVLGRILYEDD 273


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 20,755,177
Number of Sequences: 53049
Number of extensions: 403170
Number of successful extensions: 1052
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 1035
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1052
length of database: 24,988,368
effective HSP length: 79
effective length of database: 20,797,497
effective search space used: 1663799760
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)