Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmmt25c19
         (479 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z99281-11|CAB16517.1|  154|Caenorhabditis elegans Hypothetical p...   219   9e-58
Z73899-2|CAA98074.1|  536|Caenorhabditis elegans Hypothetical pr...    27   5.3  
U97006-1|AAC47965.1| 2076|Caenorhabditis elegans Hypothetical pr...    27   7.0  
AC006615-3|AAK68232.1| 1148|Caenorhabditis elegans Hypothetical ...    27   7.0  
AC006615-2|AAK68231.1| 1121|Caenorhabditis elegans Hypothetical ...    27   7.0  
Z74031-9|CAA98459.1|  101|Caenorhabditis elegans Hypothetical pr...    27   9.3  
Z32683-16|CAA83631.1| 1061|Caenorhabditis elegans Hypothetical p...    27   9.3  
Z32680-6|CAA83602.1| 1061|Caenorhabditis elegans Hypothetical pr...    27   9.3  
U50069-7|AAB37561.1|  913|Caenorhabditis elegans Hypothetical pr...    27   9.3  
AY525080-1|AAS13529.1|  362|Caenorhabditis elegans serine or cys...    27   9.3  
AC087794-5|AAM48555.1|  362|Caenorhabditis elegans Serpin protei...    27   9.3  

>Z99281-11|CAB16517.1|  154|Caenorhabditis elegans Hypothetical
           protein Y57G11C.16 protein.
          Length = 154

 Score =  219 bits (535), Expect = 9e-58
 Identities = 98/140 (70%), Positives = 119/140 (85%)
 Frame = +3

Query: 60  MSLVIPDXFQHILRIMNTNIDGKRKVMFAMTAIKGVGRRYSNIVLKKADIDLDKRAGECT 239
           MSL+IP+ FQHI R+MNTNIDG RKV +A+TAIKGVGRR++ +  +KAD+D++KRAGE T
Sbjct: 1   MSLIIPEKFQHIHRVMNTNIDGNRKVPYALTAIKGVGRRFAFVCCRKADVDVNKRAGELT 60

Query: 240 EEEVEKIITIMSNPRQYKIPDWFLNRXKDIVDGKYSQLTSSNLDSKLREDLERLKKIXAX 419
           EE+ +KI+TIM NP QYKIP+WFLNR KDI DGK  QL S+ +D+KLREDLER+KKI   
Sbjct: 61  EEDFDKIVTIMQNPSQYKIPNWFLNRQKDIKDGKTGQLLSTAVDNKLREDLERMKKIRLH 120

Query: 420 RGMRHYWGLRVRGQHTXTTG 479
           RG+RHYWGLRVRGQHT TTG
Sbjct: 121 RGLRHYWGLRVRGQHTKTTG 140


>Z73899-2|CAA98074.1|  536|Caenorhabditis elegans Hypothetical
           protein ZK829.4 protein.
          Length = 536

 Score = 27.5 bits (58), Expect = 5.3
 Identities = 12/40 (30%), Positives = 26/40 (65%), Gaps = 1/40 (2%)
 Frame = +3

Query: 276 NPRQYKIPDWFLNRXKDIVDGKYS-QLTSSNLDSKLREDL 392
           NP  YK+ D++ N+  +++  K + +L S++L  K +++L
Sbjct: 40  NPSFYKMVDFYFNKGAEVIAPKLAEELKSNSLSQKDKKNL 79


>U97006-1|AAC47965.1| 2076|Caenorhabditis elegans Hypothetical protein
            C13F10.4 protein.
          Length = 2076

 Score = 27.1 bits (57), Expect = 7.0
 Identities = 9/17 (52%), Positives = 11/17 (64%)
 Frame = +2

Query: 143  CDDGYQRCWPEVLQHCS 193
            C + YQ CWP +L  CS
Sbjct: 1512 CREYYQICWPPILLACS 1528


>AC006615-3|AAK68232.1| 1148|Caenorhabditis elegans Hypothetical
           protein C36B7.5b protein.
          Length = 1148

 Score = 27.1 bits (57), Expect = 7.0
 Identities = 8/12 (66%), Positives = 8/12 (66%)
 Frame = +1

Query: 22  CCVWERWLETXP 57
           CCVW RW E  P
Sbjct: 698 CCVWNRWTEWSP 709


>AC006615-2|AAK68231.1| 1121|Caenorhabditis elegans Hypothetical
           protein C36B7.5a protein.
          Length = 1121

 Score = 27.1 bits (57), Expect = 7.0
 Identities = 8/12 (66%), Positives = 8/12 (66%)
 Frame = +1

Query: 22  CCVWERWLETXP 57
           CCVW RW E  P
Sbjct: 698 CCVWNRWTEWSP 709


>Z74031-9|CAA98459.1|  101|Caenorhabditis elegans Hypothetical
           protein F32D8.9 protein.
          Length = 101

 Score = 26.6 bits (56), Expect = 9.3
 Identities = 10/18 (55%), Positives = 12/18 (66%)
 Frame = +1

Query: 46  ETXPKCRWSFQTNFNIFF 99
           +T   CR S  TNFNIF+
Sbjct: 63  QTRETCRGSLNTNFNIFY 80


>Z32683-16|CAA83631.1| 1061|Caenorhabditis elegans Hypothetical
           protein C28A5.6 protein.
          Length = 1061

 Score = 26.6 bits (56), Expect = 9.3
 Identities = 13/44 (29%), Positives = 22/44 (50%)
 Frame = +3

Query: 291 KIPDWFLNRXKDIVDGKYSQLTSSNLDSKLREDLERLKKIXAXR 422
           + PD++ N   D+V+G +     S+ D+    D E  +K  A R
Sbjct: 730 RAPDFYTNNAIDLVEGHWHAADESDHDNLKASDEENEQKSAAAR 773


>Z32680-6|CAA83602.1| 1061|Caenorhabditis elegans Hypothetical
           protein C28A5.6 protein.
          Length = 1061

 Score = 26.6 bits (56), Expect = 9.3
 Identities = 13/44 (29%), Positives = 22/44 (50%)
 Frame = +3

Query: 291 KIPDWFLNRXKDIVDGKYSQLTSSNLDSKLREDLERLKKIXAXR 422
           + PD++ N   D+V+G +     S+ D+    D E  +K  A R
Sbjct: 730 RAPDFYTNNAIDLVEGHWHAADESDHDNLKASDEENEQKSAAAR 773


>U50069-7|AAB37561.1|  913|Caenorhabditis elegans Hypothetical
           protein C09B9.7 protein.
          Length = 913

 Score = 26.6 bits (56), Expect = 9.3
 Identities = 22/66 (33%), Positives = 34/66 (51%), Gaps = 1/66 (1%)
 Frame = +3

Query: 264 TIMSNPRQYKIPDWFLNRXK-DIVDGKYSQLTSSNLDSKLREDLERLKKIXAXRGMRHYW 440
           +I  NP    + +  LNR      D KY    SS+++  ++ DLE+LKKI   + ++ Y 
Sbjct: 111 SIRDNPVSQSLANILLNRDTAPYYDYKY---LSSDIELMVK-DLEKLKKINKEKTLKMY- 165

Query: 441 GLRVRG 458
           GL   G
Sbjct: 166 GLLAHG 171


>AY525080-1|AAS13529.1|  362|Caenorhabditis elegans serine or
           cysteine protease inhibitorprotein.
          Length = 362

 Score = 26.6 bits (56), Expect = 9.3
 Identities = 20/63 (31%), Positives = 27/63 (42%)
 Frame = +3

Query: 60  MSLVIPDXFQHILRIMNTNIDGKRKVMFAMTAIKGVGRRYSNIVLKKADIDLDKRAGECT 239
           + L  P   Q I   +NT  +GK K +    +IK       N +  KAD D DK  G   
Sbjct: 116 LDLTTPAAVQEINSFVNTATNGKIKNIATQDSIKDAIALLINSIYFKADWD-DKFDGMSV 174

Query: 240 EEE 248
            E+
Sbjct: 175 SEQ 177


>AC087794-5|AAM48555.1|  362|Caenorhabditis elegans Serpin protein 3
           protein.
          Length = 362

 Score = 26.6 bits (56), Expect = 9.3
 Identities = 20/63 (31%), Positives = 27/63 (42%)
 Frame = +3

Query: 60  MSLVIPDXFQHILRIMNTNIDGKRKVMFAMTAIKGVGRRYSNIVLKKADIDLDKRAGECT 239
           + L  P   Q I   +NT  +GK K +    +IK       N +  KAD D DK  G   
Sbjct: 116 LDLTTPAAVQEINSFVNTATNGKIKNIATQDSIKDAIALLINSIYFKADWD-DKFDGMSV 174

Query: 240 EEE 248
            E+
Sbjct: 175 SEQ 177


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 10,544,111
Number of Sequences: 27780
Number of extensions: 204543
Number of successful extensions: 604
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 593
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 604
length of database: 12,740,198
effective HSP length: 76
effective length of database: 10,628,918
effective search space used: 882200194
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)