Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmmt25c11
(657 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Y18417-1|CAB46270.1| 463|Homo sapiens erythrocyte cytosolic pro... 227 2e-59
CR533507-1|CAG38538.1| 463|Homo sapiens RUVBL2 protein. 227 2e-59
BC008355-1|AAH08355.1| 259|Homo sapiens RUVBL2 protein protein. 227 2e-59
BC004531-1|AAH04531.1| 463|Homo sapiens RuvB-like 2 (E. coli) p... 227 2e-59
BC000428-1|AAH00428.1| 463|Homo sapiens RuvB-like 2 (E. coli) p... 227 2e-59
AK074542-1|BAC11048.1| 463|Homo sapiens protein ( Homo sapiens ... 227 2e-59
AF155138-1|AAD38073.1| 463|Homo sapiens RUVBL2 protein protein. 227 2e-59
AF151804-1|AAD34041.1| 442|Homo sapiens CGI-46 protein protein. 227 2e-59
AF124607-1|AAF87087.1| 463|Homo sapiens Reptin52 protein. 227 2e-59
AB024301-1|BAA76708.1| 463|Homo sapiens RuvB-like DNA helicase ... 227 2e-59
Y18418-1|CAB46271.1| 456|Homo sapiens erythrocyte cytosolic pro... 138 2e-32
DQ469310-1|ABF13334.1| 386|Homo sapiens RUVBL1-FK protein. 138 2e-32
BT007057-1|AAP35706.1| 456|Homo sapiens RuvB-like 1 (E. coli) p... 138 2e-32
BC012886-1|AAH12886.1| 456|Homo sapiens RuvB-like 1 (E. coli) p... 138 2e-32
BC002993-1|AAH02993.1| 456|Homo sapiens RuvB-like 1 (E. coli) p... 138 2e-32
AK222575-1|BAD96295.1| 456|Homo sapiens TATA binding protein in... 138 2e-32
AJ010058-1|CAA08986.1| 456|Homo sapiens Nuclear matrix protein ... 138 2e-32
AF380344-1|AAM45570.1| 456|Homo sapiens pontin 52 protein. 138 2e-32
AF099084-1|AAD04427.1| 456|Homo sapiens Pontin52 protein. 138 2e-32
AF070735-1|AAC77819.1| 456|Homo sapiens RuvB-like protein RUVBL... 138 2e-32
AB012122-1|BAA28169.1| 456|Homo sapiens TIP49 protein. 138 2e-32
AK222563-1|BAD96283.1| 456|Homo sapiens TATA binding protein in... 136 9e-32
BC048217-1|AAH48217.1| 695|Homo sapiens SPATA5 protein protein. 37 0.055
AK091384-1|BAC03651.1| 893|Homo sapiens protein ( Homo sapiens ... 37 0.055
AF479656-1|AAM43608.1| 790|Homo sapiens spermatogenesis associa... 37 0.055
AF361489-1|AAM00262.1| 893|Homo sapiens spermatogenesis associa... 37 0.055
U78772-1|AAB70460.1| 750|Homo sapiens nuclear VCP-like protein ... 37 0.073
U68140-1|AAB70457.1| 856|Homo sapiens nuclear VCP-like protein ... 37 0.073
BC012105-1|AAH12105.1| 659|Homo sapiens NVL protein protein. 37 0.073
BC047932-1|AAH47932.1| 437|Homo sapiens vacuolar protein sortin... 36 0.17
AF282903-1|AAG01470.1| 437|Homo sapiens vacuolar protein sortin... 36 0.17
AF255952-1|AAK52408.1| 437|Homo sapiens vacuolar protein sortin... 36 0.17
AF159063-1|AAD49227.1| 437|Homo sapiens SKD1-homolog protein. 36 0.17
AF155740-1|AAD42971.1| 432|Homo sapiens vacuolar sorting protei... 36 0.17
AF112215-1|AAF17203.1| 437|Homo sapiens SKD1 protein protein. 36 0.17
BC039574-1|AAH39574.1| 444|Homo sapiens vacuolar protein sortin... 35 0.22
AY232629-1|AAP59551.1| 444|Homo sapiens cell migration-inducing... 35 0.22
AF282904-1|AAG01471.1| 444|Homo sapiens vacuolar protein sortin... 35 0.22
AF195514-1|AAG33022.1| 444|Homo sapiens VPS4-2 ATPase protein. 35 0.22
BC024032-1|AAH24032.1| 716|Homo sapiens YME1-like 1 (S. cerevis... 35 0.29
BC023507-1|AAH23507.1| 716|Homo sapiens YME1-like 1 (S. cerevis... 35 0.29
BC007795-1|AAH07795.1| 740|Homo sapiens YME1-like 1 (S. cerevis... 35 0.29
AY358484-1|AAQ88848.1| 716|Homo sapiens YME1L1 protein. 35 0.29
AL162272-2|CAI12217.1| 716|Homo sapiens YME1-like 1 (S. cerevis... 35 0.29
AL162272-1|CAC19650.2| 773|Homo sapiens YME1-like 1 (S. cerevis... 35 0.29
AL160291-4|CAI16906.1| 716|Homo sapiens YME1-like 1 (S. cerevis... 35 0.29
AL160291-3|CAI16907.1| 773|Homo sapiens YME1-like 1 (S. cerevis... 35 0.29
AJ295618-1|CAB99462.1| 517|Homo sapiens putative ATPases protein. 35 0.29
AJ132637-1|CAB51858.1| 716|Homo sapiens ATP-dependent metallopr... 35 0.29
AF151782-1|AAK57555.1| 773|Homo sapiens ATP-dependent metallopr... 35 0.29
BC000981-1|AAH00981.1| 753|Homo sapiens spermatogenesis associa... 34 0.39
BC000612-1|AAH00612.1| 490|Homo sapiens katanin p60 subunit A-l... 34 0.39
AL356750-1|CAI13718.1| 490|Homo sapiens katanin p60 subunit A-l... 34 0.39
AK023232-1|BAB14482.1| 620|Homo sapiens protein ( Homo sapiens ... 34 0.39
AL391244-1|CAI22656.1| 473|Homo sapiens ATPase family, AAA doma... 34 0.51
AL157945-1|CAI22067.1| 473|Homo sapiens ATPase family, AAA doma... 34 0.51
BT007058-1|AAP35707.1| 320|Homo sapiens replication factor C (a... 33 0.68
BC002813-1|AAH02813.1| 320|Homo sapiens replication factor C (a... 33 0.68
AF483622-1|AAL82503.1| 320|Homo sapiens replication factor C (a... 33 0.68
AC005081-2|AAP22335.1| 320|Homo sapiens unknown protein. 33 0.68
U96131-1|AAB64095.1| 432|Homo sapiens HPV16 E1 protein binding ... 33 0.90
CR456744-1|CAG33025.1| 432|Homo sapiens TRIP13 protein. 33 0.90
BC122550-1|AAI22551.1| 475|Homo sapiens VCP protein protein. 33 0.90
BC121794-1|AAI21795.1| 806|Homo sapiens valosin-containing prot... 33 0.90
BC110913-1|AAI10914.1| 806|Homo sapiens valosin-containing prot... 33 0.90
BC019294-1|AAH19294.1| 432|Homo sapiens thyroid hormone recepto... 33 0.90
BC007562-1|AAH07562.2| 644|Homo sapiens VCP protein protein. 33 0.90
BC000404-1|AAH00404.1| 432|Homo sapiens thyroid hormone recepto... 33 0.90
AL353795-2|CAH70993.1| 806|Homo sapiens valosin-containing prot... 33 0.90
AF313486-1|AAG29874.1| 305|Homo sapiens valosin-containing prot... 33 0.90
AF313485-1|AAG29873.1| 307|Homo sapiens valosin-containing prot... 33 0.90
AF100752-1|AAD43016.1| 806|Homo sapiens transitional endoplasmi... 33 0.90
AC004472-1|AAC07984.1| 806|Homo sapiens TERA_HUMAN protein. 33 0.90
Y18314-1|CAB48398.1| 797|Homo sapiens paraplegin-like protein p... 33 1.2
L38810-1|AAC41735.1| 406|Homo sapiens thyroid receptor interact... 33 1.2
D44467-1|BAA07919.1| 406|Homo sapiens 26S proteasome subunit p4... 33 1.2
BC065016-1|AAH65016.1| 797|Homo sapiens AFG3 ATPase family gene... 33 1.2
BC024282-1|AAH24282.1| 812|Homo sapiens Similar to AFG3 ATPase ... 33 1.2
BC018701-1|AAH18701.1| 648|Homo sapiens ATPase family, AAA doma... 33 1.2
BC002542-1|AAH02542.1| 648|Homo sapiens ATPase family, AAA doma... 33 1.2
BC002367-1|AAH02367.3| 406|Homo sapiens proteasome (prosome, ma... 33 1.2
BC001932-1|AAH01932.1| 406|Homo sapiens proteasome (prosome, ma... 33 1.2
AL157945-2|CAI22068.1| 648|Homo sapiens ATPase family, AAA doma... 33 1.2
AK024028-1|BAB14787.1| 480|Homo sapiens protein ( Homo sapiens ... 33 1.2
AF035309-1|AAB88187.1| 280|Homo sapiens protein ( Homo sapiens ... 33 1.2
AB209036-1|BAD92273.1| 345|Homo sapiens proteasome 26S ATPase s... 33 1.2
AB033099-1|BAA86587.1| 606|Homo sapiens KIAA1273 protein protein. 33 1.2
M87338-1|AAB09786.1| 354|Homo sapiens replication factor C, 40-... 32 1.6
BC051867-1|AAH51867.1| 674|Homo sapiens fidgetin-like 1 protein. 32 1.6
BC036104-1|AAH36104.1| 795|Homo sapiens spastic paraplegia 7 (p... 32 1.6
BC027856-1|AAH27856.1| 674|Homo sapiens FIGNL1 protein protein. 32 1.6
AK023411-1|BAB14567.1| 254|Homo sapiens protein ( Homo sapiens ... 32 1.6
AK023142-1|BAB14426.1| 674|Homo sapiens protein ( Homo sapiens ... 32 1.6
AF045555-4|AAC04860.1| 354|Homo sapiens replication factor C su... 32 1.6
AC018705-1|AAS01996.1| 674|Homo sapiens unknown protein. 32 1.6
AC005081-1|AAP22334.1| 354|Homo sapiens unknown protein. 32 1.6
D78275-1|BAA11338.1| 389|Homo sapiens proteasome subunit p42 pr... 32 2.1
CR456709-1|CAG32990.1| 389|Homo sapiens PSMC6 protein. 32 2.1
BT006843-1|AAP35489.1| 389|Homo sapiens proteasome (prosome, ma... 32 2.1
BC150260-1|AAI50261.1| 584|Homo sapiens spastin protein. 32 2.1
BC005390-1|AAH05390.1| 389|Homo sapiens proteasome (prosome, ma... 32 2.1
AK022348-1|BAB14017.1| 392|Homo sapiens protein ( Homo sapiens ... 32 2.1
AJ246003-1|CAB60208.1| 616|Homo sapiens spastin protein protein. 32 2.1
AJ246001-1|CAB60141.1| 616|Homo sapiens spastin protein protein. 32 2.1
AF132747-1|AAL75948.1| 437|Homo sapiens SKD2 protein protein. 32 2.1
AF006305-1|AAB61616.1| 389|Homo sapiens 26S proteasome regulato... 32 2.1
AB029006-1|BAA83035.1| 584|Homo sapiens KIAA1083 protein protein. 32 2.1
Y16610-1|CAA76314.1| 795|Homo sapiens paraplegin protein. 31 2.7
BX276089-2|CAI16431.1| 491|Homo sapiens katanin p60 (ATPase-con... 31 2.7
BX276089-1|CAI16432.1| 311|Homo sapiens katanin p60 (ATPase-con... 31 2.7
BC050428-1|AAH50428.1| 311|Homo sapiens KATNA1 protein protein. 31 2.7
BC035929-1|AAH35929.1| 732|Homo sapiens SPG7 protein protein. 31 2.7
AL078581-2|CAI19505.1| 491|Homo sapiens katanin p60 (ATPase-con... 31 2.7
AL078581-1|CAI19504.1| 311|Homo sapiens katanin p60 (ATPase-con... 31 2.7
AF080525-1|AAD28099.1| 795|Homo sapiens paraplegin protein. 31 2.7
AF056022-1|AAC25114.1| 491|Homo sapiens p60 katanin protein. 31 2.7
U56602-1|AAC50655.1| 980|Homo sapiens Pxaaa1p protein. 31 3.6
L07540-1|AAB09784.1| 340|Homo sapiens replication factor C, 36-... 31 3.6
D83703-1|BAA12069.1| 980|Homo sapiens peroxisome assembly facto... 31 3.6
CR407651-1|CAG28579.1| 340|Homo sapiens RFC5 protein. 31 3.6
BC048331-1|AAH48331.1| 980|Homo sapiens peroxisomal biogenesis ... 31 3.6
BC013961-1|AAH13961.1| 340|Homo sapiens replication factor C (a... 31 3.6
BC001866-1|AAH01866.1| 340|Homo sapiens replication factor C (a... 31 3.6
AY254323-1|AAO63493.1| 340|Homo sapiens replication factor C (a... 31 3.6
AL158815-3|CAI19463.1| 980|Homo sapiens peroxisomal biogenesis ... 31 3.6
AF108098-1|AAF62564.1| 980|Homo sapiens peroxisome assembly fac... 31 3.6
AB208992-1|BAD92229.1| 351|Homo sapiens replication factor C 5 ... 31 3.6
AB051077-1|BAB83047.1| 892|Homo sapiens peroxin Pex6p protein. 31 3.6
AB051076-1|BAB83046.1| 980|Homo sapiens peroxine Pex6p protein. 31 3.6
AB020696-1|BAA74912.2| 535|Homo sapiens KIAA0889 protein protein. 31 3.6
X76040-1|CAA53625.1| 937|Homo sapiens Lon protease-like protein... 31 4.8
X74215-1|CAA52291.1| 845|Homo sapiens Lon protease-like protein... 31 4.8
U02389-1|AAA61616.1| 962|Homo sapiens hLON ATP-dependent protea... 31 4.8
D11094-1|BAA01868.1| 433|Homo sapiens mammalian suppressor of s... 31 4.8
BC109218-1|AAI09219.1| 848|Homo sapiens LONP1 protein protein. 31 4.8
BC034999-1|AAH34999.2| 466|Homo sapiens katanin p60 subunit A-l... 31 4.8
BC021245-1|AAH21245.2| 122|Homo sapiens AFG3L1 protein protein. 31 4.8
BC004934-1|AAH04934.1| 517|Homo sapiens Unknown (protein for IM... 31 4.8
BC002589-1|AAH02589.1| 433|Homo sapiens proteasome (prosome, ma... 31 4.8
BC000235-1|AAH00235.1| 959|Homo sapiens lon peptidase 1, mitoch... 31 4.8
AL583839-8|CAO03351.1| 1772|Homo sapiens WNK lysine deficient pr... 31 4.8
AL390760-4|CAO03648.1| 1772|Homo sapiens WNK lysine deficient pr... 31 4.8
AL354991-4|CAO03640.1| 1772|Homo sapiens WNK lysine deficient pr... 31 4.8
AK096626-1|BAC04829.1| 895|Homo sapiens protein ( Homo sapiens ... 31 4.8
AF059309-1|AAD24414.1| 959|Homo sapiens LON protease protein. 31 4.8
AC093701-1|AAS07429.1| 409|Homo sapiens unknown protein. 31 4.8
AB075520-1|BAE45763.1| 433|Homo sapiens putative protein produc... 31 4.8
U03985-1|AAA17411.1| 751|Homo sapiens protein ( Human N-ethylma... 30 6.3
BC065299-1|AAH65299.1| 271|Homo sapiens signal recognition part... 30 6.3
BC063607-1|AAH63607.1| 586|Homo sapiens ATAD3A protein protein. 30 6.3
BC063001-1|AAH63001.1| 271|Homo sapiens signal recognition part... 30 6.3
BC033109-1|AAH33109.1| 586|Homo sapiens ATAD3A protein protein. 30 6.3
BC018184-1|AAH18184.1| 975|Homo sapiens CTF18, chromosome trans... 30 6.3
BC014101-1|AAH14101.1| 586|Homo sapiens ATAD3A protein protein. 30 6.3
BC011814-1|AAH11814.1| 586|Homo sapiens ATAD3A protein protein. 30 6.3
BC007803-1|AAH07803.1| 586|Homo sapiens ATAD3A protein protein. 30 6.3
BC006437-1|AAH06437.1| 1016|Homo sapiens CHTF18 protein protein. 30 6.3
BC006278-1|AAH06278.2| 975|Homo sapiens CTF18, chromosome trans... 30 6.3
AL645728-11|CAI22954.1| 634|Homo sapiens ATPase family, AAA dom... 30 6.3
AL645728-10|CAI22955.1| 586|Homo sapiens ATPase family, AAA dom... 30 6.3
AL645728-9|CAI22953.1| 571|Homo sapiens ATPase family, AAA doma... 30 6.3
AL353692-3|CAI16236.1| 5596|Homo sapiens MDN1, midasin homolog (... 30 6.3
AL353692-2|CAI16235.1| 1181|Homo sapiens MDN1, midasin homolog (... 30 6.3
AL158813-2|CAI13203.1| 5596|Homo sapiens MDN1, midasin homolog (... 30 6.3
AL158813-1|CAI13202.1| 1181|Homo sapiens MDN1, midasin homolog (... 30 6.3
AL096678-1|CAI42279.1| 5596|Homo sapiens MDN1, midasin homolog (... 30 6.3
AL031033-2|CAB53056.1| 260|Homo sapiens protein ( Human DNA seq... 30 6.3
AK127496-1|BAC87007.1| 1375|Homo sapiens protein ( Homo sapiens ... 30 6.3
AK097044-1|BAC04933.1| 199|Homo sapiens protein ( Homo sapiens ... 30 6.3
AK091144-1|BAC03595.1| 634|Homo sapiens protein ( Homo sapiens ... 30 6.3
AK075531-1|BAC11675.1| 271|Homo sapiens protein ( Homo sapiens ... 30 6.3
AK027525-1|BAB55176.1| 271|Homo sapiens protein ( Homo sapiens ... 30 6.3
AK001571-1|BAA91764.1| 586|Homo sapiens protein ( Homo sapiens ... 30 6.3
AF503925-1|AAM77722.1| 5596|Homo sapiens midasin protein. 30 6.3
AF194815-1|AAF20673.1| 115|Homo sapiens immunoglobulin lambda l... 30 6.3
AF141882-1|AAD34888.3| 271|Homo sapiens APMCF1 protein. 30 6.3
AF135168-1|AAF70545.1| 744|Homo sapiens N-ethylmaleimide-sensit... 30 6.3
AF102846-1|AAF04745.2| 744|Homo sapiens N-ethylmaleimide-sensit... 30 6.3
AF086914-1|AAP97144.1| 271|Homo sapiens signal recognition part... 30 6.3
AE006465-2|AAK61256.1| 1184|Homo sapiens some homology with holl... 30 6.3
L02426-1|AAA35484.1| 440|Homo sapiens 26S protease (S4) regulat... 30 8.3
CR457044-1|CAG33325.1| 440|Homo sapiens PSMC1 protein. 30 8.3
BT009826-1|AAP88828.1| 440|Homo sapiens proteasome (prosome, ma... 30 8.3
BC073818-1|AAH73818.1| 440|Homo sapiens proteasome (prosome, ma... 30 8.3
BC067741-1|AAH67741.1| 440|Homo sapiens proteasome (prosome, ma... 30 8.3
BC035575-1|AAH35575.1| 1283|Homo sapiens peroxisome biogenesis f... 30 8.3
BC016368-1|AAH16368.1| 440|Homo sapiens proteasome (prosome, ma... 30 8.3
BC000512-1|AAH00512.1| 440|Homo sapiens proteasome (prosome, ma... 30 8.3
AY045575-1|AAK92217.1| 4624|Homo sapiens axonemal dynein heavy c... 30 8.3
AK222668-1|BAD96388.1| 440|Homo sapiens proteasome 26S ATPase s... 30 8.3
AF030356-1|AAB99758.1| 1283|Homo sapiens peroxisome biogenesis g... 30 8.3
AF026086-1|AAB87880.1| 1283|Homo sapiens peroxisome biogenesis d... 30 8.3
AC000064-1|AAB46346.1| 541|Homo sapiens WUGSC:H_RG083M05.1 prot... 30 8.3
AB209424-1|BAD92661.1| 294|Homo sapiens Putative GTP-binding pr... 30 8.3
AB052092-1|BAB59063.1| 1283|Homo sapiens Pex1pG843D protein. 30 8.3
AB052091-1|BAB59062.1| 1283|Homo sapiens Pex1pL664P protein. 30 8.3
AB052090-1|BAB59061.1| 1226|Homo sapiens Pex1p-634del690 protein. 30 8.3
AB008112-1|BAA85162.1| 1283|Homo sapiens PEX1 protein. 30 8.3
>Y18417-1|CAB46270.1| 463|Homo sapiens erythrocyte cytosolic
protein of 51 kDa, ECP-51 protein.
Length = 463
Score = 227 bits (556), Expect = 2e-59
Identities = 117/180 (65%), Positives = 133/180 (73%), Gaps = 1/180 (0%)
Frame = +2
Query: 119 MASIAAA-QVQEVRSITRIERIGAHSHIRGLGLDDSLEPRQVSQGMVGQKMARKAAGVIL 295
MA++ A +V E+R +TRIERIGAHSHIRGLGLDD+LEPRQ SQGMVGQ AR+AAGV+L
Sbjct: 1 MATVTATTKVPEIRDVTRIERIGAHSHIRGLGLDDALEPRQASQGMVGQLAARRAAGVVL 60
Query: 296 QMIREGKIAGRAVLLAGQPGTGKTAIAMGLAQALGPDTPFTSMAGSEIFSLEMSKTEALT 475
+MIREGKIAGRAVL+AGQPGTGKTAIAMG+AQALGPDTPFT++AGSEIFSLEMSKTEALT
Sbjct: 61 EMIREGKIAGRAVLIAGQPGTGKTAIAMGMAQALGPDTPFTAIAGSEIFSLEMSKTEALT 120
Query: 476 QAIRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLTLKTTDMETNYDMGAKMID 655
QA R LTLKTT+MET YD+G KMI+
Sbjct: 121 QAFRRSIGVRIKEETEIIEGEVVEIQIDRPATGTGSKVGKLTLKTTEMETIYDLGTKMIE 180
>CR533507-1|CAG38538.1| 463|Homo sapiens RUVBL2 protein.
Length = 463
Score = 227 bits (556), Expect = 2e-59
Identities = 117/180 (65%), Positives = 133/180 (73%), Gaps = 1/180 (0%)
Frame = +2
Query: 119 MASIAAA-QVQEVRSITRIERIGAHSHIRGLGLDDSLEPRQVSQGMVGQKMARKAAGVIL 295
MA++ A +V E+R +TRIERIGAHSHIRGLGLDD+LEPRQ SQGMVGQ AR+AAGV+L
Sbjct: 1 MATVTATTKVPEIRDVTRIERIGAHSHIRGLGLDDALEPRQASQGMVGQLAARRAAGVVL 60
Query: 296 QMIREGKIAGRAVLLAGQPGTGKTAIAMGLAQALGPDTPFTSMAGSEIFSLEMSKTEALT 475
+MIREGKIAGRAVL+AGQPGTGKTAIAMG+AQALGPDTPFT++AGSEIFSLEMSKTEALT
Sbjct: 61 EMIREGKIAGRAVLIAGQPGTGKTAIAMGMAQALGPDTPFTAIAGSEIFSLEMSKTEALT 120
Query: 476 QAIRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLTLKTTDMETNYDMGAKMID 655
QA R LTLKTT+MET YD+G KMI+
Sbjct: 121 QAFRRSIGVRIKEETEIIEGEVVEIQIDRPATGTGSKVGKLTLKTTEMETIYDLGTKMIE 180
>BC008355-1|AAH08355.1| 259|Homo sapiens RUVBL2 protein protein.
Length = 259
Score = 227 bits (556), Expect = 2e-59
Identities = 117/180 (65%), Positives = 133/180 (73%), Gaps = 1/180 (0%)
Frame = +2
Query: 119 MASIAAA-QVQEVRSITRIERIGAHSHIRGLGLDDSLEPRQVSQGMVGQKMARKAAGVIL 295
MA++ A +V E+R +TRIERIGAHSHIRGLGLDD+LEPRQ SQGMVGQ AR+AAGV+L
Sbjct: 1 MATVTATTKVPEIRDVTRIERIGAHSHIRGLGLDDALEPRQASQGMVGQLAARRAAGVVL 60
Query: 296 QMIREGKIAGRAVLLAGQPGTGKTAIAMGLAQALGPDTPFTSMAGSEIFSLEMSKTEALT 475
+MIREGKIAGRAVL+AGQPGTGKTAIAMG+AQALGPDTPFT++AGSEIFSLEMSKTEALT
Sbjct: 61 EMIREGKIAGRAVLIAGQPGTGKTAIAMGMAQALGPDTPFTAIAGSEIFSLEMSKTEALT 120
Query: 476 QAIRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLTLKTTDMETNYDMGAKMID 655
QA R LTLKTT+MET YD+G KMI+
Sbjct: 121 QAFRRSIGVRIKEETEIIEGEVVEIQIDRPATGTGSKVGKLTLKTTEMETIYDLGTKMIE 180
>BC004531-1|AAH04531.1| 463|Homo sapiens RuvB-like 2 (E. coli)
protein.
Length = 463
Score = 227 bits (556), Expect = 2e-59
Identities = 117/180 (65%), Positives = 133/180 (73%), Gaps = 1/180 (0%)
Frame = +2
Query: 119 MASIAAA-QVQEVRSITRIERIGAHSHIRGLGLDDSLEPRQVSQGMVGQKMARKAAGVIL 295
MA++ A +V E+R +TRIERIGAHSHIRGLGLDD+LEPRQ SQGMVGQ AR+AAGV+L
Sbjct: 1 MATVTATTKVPEIRDVTRIERIGAHSHIRGLGLDDALEPRQASQGMVGQLAARRAAGVVL 60
Query: 296 QMIREGKIAGRAVLLAGQPGTGKTAIAMGLAQALGPDTPFTSMAGSEIFSLEMSKTEALT 475
+MIREGKIAGRAVL+AGQPGTGKTAIAMG+AQALGPDTPFT++AGSEIFSLEMSKTEALT
Sbjct: 61 EMIREGKIAGRAVLIAGQPGTGKTAIAMGMAQALGPDTPFTAIAGSEIFSLEMSKTEALT 120
Query: 476 QAIRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLTLKTTDMETNYDMGAKMID 655
QA R LTLKTT+MET YD+G KMI+
Sbjct: 121 QAFRRSIGVRIKEETEIIEGEVVEIQIDRPATGTGSKVGKLTLKTTEMETIYDLGTKMIE 180
>BC000428-1|AAH00428.1| 463|Homo sapiens RuvB-like 2 (E. coli)
protein.
Length = 463
Score = 227 bits (556), Expect = 2e-59
Identities = 117/180 (65%), Positives = 133/180 (73%), Gaps = 1/180 (0%)
Frame = +2
Query: 119 MASIAAA-QVQEVRSITRIERIGAHSHIRGLGLDDSLEPRQVSQGMVGQKMARKAAGVIL 295
MA++ A +V E+R +TRIERIGAHSHIRGLGLDD+LEPRQ SQGMVGQ AR+AAGV+L
Sbjct: 1 MATVTATTKVPEIRDVTRIERIGAHSHIRGLGLDDALEPRQASQGMVGQLAARRAAGVVL 60
Query: 296 QMIREGKIAGRAVLLAGQPGTGKTAIAMGLAQALGPDTPFTSMAGSEIFSLEMSKTEALT 475
+MIREGKIAGRAVL+AGQPGTGKTAIAMG+AQALGPDTPFT++AGSEIFSLEMSKTEALT
Sbjct: 61 EMIREGKIAGRAVLIAGQPGTGKTAIAMGMAQALGPDTPFTAIAGSEIFSLEMSKTEALT 120
Query: 476 QAIRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLTLKTTDMETNYDMGAKMID 655
QA R LTLKTT+MET YD+G KMI+
Sbjct: 121 QAFRRSIGVRIKEETEIIEGEVVEIQIDRPATGTGSKVGKLTLKTTEMETIYDLGTKMIE 180
>AK074542-1|BAC11048.1| 463|Homo sapiens protein ( Homo sapiens
cDNA FLJ90061 fis, clone HEMBA1003315, highly similar to
RuvB-like 2 (EC 3.6.1.-). ).
Length = 463
Score = 227 bits (556), Expect = 2e-59
Identities = 117/180 (65%), Positives = 133/180 (73%), Gaps = 1/180 (0%)
Frame = +2
Query: 119 MASIAAA-QVQEVRSITRIERIGAHSHIRGLGLDDSLEPRQVSQGMVGQKMARKAAGVIL 295
MA++ A +V E+R +TRIERIGAHSHIRGLGLDD+LEPRQ SQGMVGQ AR+AAGV+L
Sbjct: 1 MATVTATTKVPEIRDVTRIERIGAHSHIRGLGLDDALEPRQASQGMVGQLAARRAAGVVL 60
Query: 296 QMIREGKIAGRAVLLAGQPGTGKTAIAMGLAQALGPDTPFTSMAGSEIFSLEMSKTEALT 475
+MIREGKIAGRAVL+AGQPGTGKTAIAMG+AQALGPDTPFT++AGSEIFSLEMSKTEALT
Sbjct: 61 EMIREGKIAGRAVLIAGQPGTGKTAIAMGMAQALGPDTPFTAIAGSEIFSLEMSKTEALT 120
Query: 476 QAIRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLTLKTTDMETNYDMGAKMID 655
QA R LTLKTT+MET YD+G KMI+
Sbjct: 121 QAFRRSIGVRIKEETEIIEGEVVEIQIDRPATGTGSKVGKLTLKTTEMETIYDLGTKMIE 180
>AF155138-1|AAD38073.1| 463|Homo sapiens RUVBL2 protein protein.
Length = 463
Score = 227 bits (556), Expect = 2e-59
Identities = 117/180 (65%), Positives = 133/180 (73%), Gaps = 1/180 (0%)
Frame = +2
Query: 119 MASIAAA-QVQEVRSITRIERIGAHSHIRGLGLDDSLEPRQVSQGMVGQKMARKAAGVIL 295
MA++ A +V E+R +TRIERIGAHSHIRGLGLDD+LEPRQ SQGMVGQ AR+AAGV+L
Sbjct: 1 MATVTATTKVPEIRDVTRIERIGAHSHIRGLGLDDALEPRQASQGMVGQLAARRAAGVVL 60
Query: 296 QMIREGKIAGRAVLLAGQPGTGKTAIAMGLAQALGPDTPFTSMAGSEIFSLEMSKTEALT 475
+MIREGKIAGRAVL+AGQPGTGKTAIAMG+AQALGPDTPFT++AGSEIFSLEMSKTEALT
Sbjct: 61 EMIREGKIAGRAVLIAGQPGTGKTAIAMGMAQALGPDTPFTAIAGSEIFSLEMSKTEALT 120
Query: 476 QAIRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLTLKTTDMETNYDMGAKMID 655
QA R LTLKTT+MET YD+G KMI+
Sbjct: 121 QAFRRSIGVRIKEETEIIEGEVVEIQIDRPATGTGSKVGKLTLKTTEMETIYDLGTKMIE 180
>AF151804-1|AAD34041.1| 442|Homo sapiens CGI-46 protein protein.
Length = 442
Score = 227 bits (556), Expect = 2e-59
Identities = 117/180 (65%), Positives = 133/180 (73%), Gaps = 1/180 (0%)
Frame = +2
Query: 119 MASIAAA-QVQEVRSITRIERIGAHSHIRGLGLDDSLEPRQVSQGMVGQKMARKAAGVIL 295
MA++ A +V E+R +TRIERIGAHSHIRGLGLDD+LEPRQ SQGMVGQ AR+AAGV+L
Sbjct: 1 MATVTATTKVPEIRDVTRIERIGAHSHIRGLGLDDALEPRQASQGMVGQLAARRAAGVVL 60
Query: 296 QMIREGKIAGRAVLLAGQPGTGKTAIAMGLAQALGPDTPFTSMAGSEIFSLEMSKTEALT 475
+MIREGKIAGRAVL+AGQPGTGKTAIAMG+AQALGPDTPFT++AGSEIFSLEMSKTEALT
Sbjct: 61 EMIREGKIAGRAVLIAGQPGTGKTAIAMGMAQALGPDTPFTAIAGSEIFSLEMSKTEALT 120
Query: 476 QAIRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLTLKTTDMETNYDMGAKMID 655
QA R LTLKTT+MET YD+G KMI+
Sbjct: 121 QAFRRSIGVRIKEETEIIEGEVVEIQIDRPATGTGSKVGKLTLKTTEMETIYDLGTKMIE 180
>AF124607-1|AAF87087.1| 463|Homo sapiens Reptin52 protein.
Length = 463
Score = 227 bits (556), Expect = 2e-59
Identities = 117/180 (65%), Positives = 133/180 (73%), Gaps = 1/180 (0%)
Frame = +2
Query: 119 MASIAAA-QVQEVRSITRIERIGAHSHIRGLGLDDSLEPRQVSQGMVGQKMARKAAGVIL 295
MA++ A +V E+R +TRIERIGAHSHIRGLGLDD+LEPRQ SQGMVGQ AR+AAGV+L
Sbjct: 1 MATVTATTKVPEIRDVTRIERIGAHSHIRGLGLDDALEPRQASQGMVGQLAARRAAGVVL 60
Query: 296 QMIREGKIAGRAVLLAGQPGTGKTAIAMGLAQALGPDTPFTSMAGSEIFSLEMSKTEALT 475
+MIREGKIAGRAVL+AGQPGTGKTAIAMG+AQALGPDTPFT++AGSEIFSLEMSKTEALT
Sbjct: 61 EMIREGKIAGRAVLIAGQPGTGKTAIAMGMAQALGPDTPFTAIAGSEIFSLEMSKTEALT 120
Query: 476 QAIRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLTLKTTDMETNYDMGAKMID 655
QA R LTLKTT+MET YD+G KMI+
Sbjct: 121 QAFRRSIGVRIKEETEIIEGEVVEIQIDRPATGTGSKVGKLTLKTTEMETIYDLGTKMIE 180
>AB024301-1|BAA76708.1| 463|Homo sapiens RuvB-like DNA helicase
TIP49b protein.
Length = 463
Score = 227 bits (556), Expect = 2e-59
Identities = 117/180 (65%), Positives = 133/180 (73%), Gaps = 1/180 (0%)
Frame = +2
Query: 119 MASIAAA-QVQEVRSITRIERIGAHSHIRGLGLDDSLEPRQVSQGMVGQKMARKAAGVIL 295
MA++ A +V E+R +TRIERIGAHSHIRGLGLDD+LEPRQ SQGMVGQ AR+AAGV+L
Sbjct: 1 MATVTATTKVPEIRDVTRIERIGAHSHIRGLGLDDALEPRQASQGMVGQLAARRAAGVVL 60
Query: 296 QMIREGKIAGRAVLLAGQPGTGKTAIAMGLAQALGPDTPFTSMAGSEIFSLEMSKTEALT 475
+MIREGKIAGRAVL+AGQPGTGKTAIAMG+AQALGPDTPFT++AGSEIFSLEMSKTEALT
Sbjct: 61 EMIREGKIAGRAVLIAGQPGTGKTAIAMGMAQALGPDTPFTAIAGSEIFSLEMSKTEALT 120
Query: 476 QAIRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLTLKTTDMETNYDMGAKMID 655
QA R LTLKTT+MET YD+G KMI+
Sbjct: 121 QAFRRSIGVRIKEETEIIEGEVVEIQIDRPATGTGSKVGKLTLKTTEMETIYDLGTKMIE 180
>Y18418-1|CAB46271.1| 456|Homo sapiens erythrocyte cytosolic
protein of 54 kDa, ECP-54 protein.
Length = 456
Score = 138 bits (333), Expect = 2e-32
Identities = 62/116 (53%), Positives = 89/116 (76%)
Frame = +2
Query: 140 QVQEVRSITRIERIGAHSHIRGLGLDDSLEPRQVSQGMVGQKMARKAAGVILQMIREGKI 319
+++EV+S T+ +RI +HSH++GLGLD+S +Q + G+VGQ+ AR+A GVI+++I+ K+
Sbjct: 2 KIEEVKSTTKTQRIASHSHVKGLGLDESGLAKQAASGLVGQENAREACGVIVELIKSKKM 61
Query: 320 AGRAVLLAGQPGTGKTAIAMGLAQALGPDTPFTSMAGSEIFSLEMSKTEALTQAIR 487
AGRAVLLAG PGTGKTA+A+ +AQ LG PF M GSE++S E+ KTE L + R
Sbjct: 62 AGRAVLLAGPPGTGKTALALAIAQELGSKVPFCPMVGSEVYSTEIKKTEVLMENFR 117
>DQ469310-1|ABF13334.1| 386|Homo sapiens RUVBL1-FK protein.
Length = 386
Score = 138 bits (333), Expect = 2e-32
Identities = 62/116 (53%), Positives = 89/116 (76%)
Frame = +2
Query: 140 QVQEVRSITRIERIGAHSHIRGLGLDDSLEPRQVSQGMVGQKMARKAAGVILQMIREGKI 319
+++EV+S T+ +RI +HSH++GLGLD+S +Q + G+VGQ+ AR+A GVI+++I+ K+
Sbjct: 2 KIEEVKSTTKTQRIASHSHVKGLGLDESGLAKQAASGLVGQENAREACGVIVELIKSKKM 61
Query: 320 AGRAVLLAGQPGTGKTAIAMGLAQALGPDTPFTSMAGSEIFSLEMSKTEALTQAIR 487
AGRAVLLAG PGTGKTA+A+ +AQ LG PF M GSE++S E+ KTE L + R
Sbjct: 62 AGRAVLLAGPPGTGKTALALAIAQELGSKVPFCPMVGSEVYSTEIKKTEVLMENFR 117
>BT007057-1|AAP35706.1| 456|Homo sapiens RuvB-like 1 (E. coli)
protein.
Length = 456
Score = 138 bits (333), Expect = 2e-32
Identities = 62/116 (53%), Positives = 89/116 (76%)
Frame = +2
Query: 140 QVQEVRSITRIERIGAHSHIRGLGLDDSLEPRQVSQGMVGQKMARKAAGVILQMIREGKI 319
+++EV+S T+ +RI +HSH++GLGLD+S +Q + G+VGQ+ AR+A GVI+++I+ K+
Sbjct: 2 KIEEVKSTTKTQRIASHSHVKGLGLDESGLAKQAASGLVGQENAREACGVIVELIKSKKM 61
Query: 320 AGRAVLLAGQPGTGKTAIAMGLAQALGPDTPFTSMAGSEIFSLEMSKTEALTQAIR 487
AGRAVLLAG PGTGKTA+A+ +AQ LG PF M GSE++S E+ KTE L + R
Sbjct: 62 AGRAVLLAGPPGTGKTALALAIAQELGSKVPFCPMVGSEVYSTEIKKTEVLMENFR 117
>BC012886-1|AAH12886.1| 456|Homo sapiens RuvB-like 1 (E. coli)
protein.
Length = 456
Score = 138 bits (333), Expect = 2e-32
Identities = 62/116 (53%), Positives = 89/116 (76%)
Frame = +2
Query: 140 QVQEVRSITRIERIGAHSHIRGLGLDDSLEPRQVSQGMVGQKMARKAAGVILQMIREGKI 319
+++EV+S T+ +RI +HSH++GLGLD+S +Q + G+VGQ+ AR+A GVI+++I+ K+
Sbjct: 2 KIEEVKSTTKTQRIASHSHVKGLGLDESGLAKQAASGLVGQENAREACGVIVELIKSKKM 61
Query: 320 AGRAVLLAGQPGTGKTAIAMGLAQALGPDTPFTSMAGSEIFSLEMSKTEALTQAIR 487
AGRAVLLAG PGTGKTA+A+ +AQ LG PF M GSE++S E+ KTE L + R
Sbjct: 62 AGRAVLLAGPPGTGKTALALAIAQELGSKVPFCPMVGSEVYSTEIKKTEVLMENFR 117
>BC002993-1|AAH02993.1| 456|Homo sapiens RuvB-like 1 (E. coli)
protein.
Length = 456
Score = 138 bits (333), Expect = 2e-32
Identities = 62/116 (53%), Positives = 89/116 (76%)
Frame = +2
Query: 140 QVQEVRSITRIERIGAHSHIRGLGLDDSLEPRQVSQGMVGQKMARKAAGVILQMIREGKI 319
+++EV+S T+ +RI +HSH++GLGLD+S +Q + G+VGQ+ AR+A GVI+++I+ K+
Sbjct: 2 KIEEVKSTTKTQRIASHSHVKGLGLDESGLAKQAASGLVGQENAREACGVIVELIKSKKM 61
Query: 320 AGRAVLLAGQPGTGKTAIAMGLAQALGPDTPFTSMAGSEIFSLEMSKTEALTQAIR 487
AGRAVLLAG PGTGKTA+A+ +AQ LG PF M GSE++S E+ KTE L + R
Sbjct: 62 AGRAVLLAGPPGTGKTALALAIAQELGSKVPFCPMVGSEVYSTEIKKTEVLMENFR 117
>AK222575-1|BAD96295.1| 456|Homo sapiens TATA binding protein
interacting protein 49 kDa variant protein.
Length = 456
Score = 138 bits (333), Expect = 2e-32
Identities = 62/116 (53%), Positives = 89/116 (76%)
Frame = +2
Query: 140 QVQEVRSITRIERIGAHSHIRGLGLDDSLEPRQVSQGMVGQKMARKAAGVILQMIREGKI 319
+++EV+S T+ +RI +HSH++GLGLD+S +Q + G+VGQ+ AR+A GVI+++I+ K+
Sbjct: 2 KIEEVKSTTKTQRIASHSHVKGLGLDESGLAKQAASGLVGQENAREACGVIVELIKSKKM 61
Query: 320 AGRAVLLAGQPGTGKTAIAMGLAQALGPDTPFTSMAGSEIFSLEMSKTEALTQAIR 487
AGRAVLLAG PGTGKTA+A+ +AQ LG PF M GSE++S E+ KTE L + R
Sbjct: 62 AGRAVLLAGPPGTGKTALALAIAQELGSKVPFCPMVGSEVYSTEIKKTEVLMENFR 117
>AJ010058-1|CAA08986.1| 456|Homo sapiens Nuclear matrix protein
NMP238 protein.
Length = 456
Score = 138 bits (333), Expect = 2e-32
Identities = 62/116 (53%), Positives = 89/116 (76%)
Frame = +2
Query: 140 QVQEVRSITRIERIGAHSHIRGLGLDDSLEPRQVSQGMVGQKMARKAAGVILQMIREGKI 319
+++EV+S T+ +RI +HSH++GLGLD+S +Q + G+VGQ+ AR+A GVI+++I+ K+
Sbjct: 2 KIEEVKSTTKTQRIASHSHVKGLGLDESGLAKQAASGLVGQENAREACGVIVELIKSKKM 61
Query: 320 AGRAVLLAGQPGTGKTAIAMGLAQALGPDTPFTSMAGSEIFSLEMSKTEALTQAIR 487
AGRAVLLAG PGTGKTA+A+ +AQ LG PF M GSE++S E+ KTE L + R
Sbjct: 62 AGRAVLLAGPPGTGKTALALAIAQELGSKVPFCPMVGSEVYSTEIKKTEVLMENFR 117
>AF380344-1|AAM45570.1| 456|Homo sapiens pontin 52 protein.
Length = 456
Score = 138 bits (333), Expect = 2e-32
Identities = 62/116 (53%), Positives = 89/116 (76%)
Frame = +2
Query: 140 QVQEVRSITRIERIGAHSHIRGLGLDDSLEPRQVSQGMVGQKMARKAAGVILQMIREGKI 319
+++EV+S T+ +RI +HSH++GLGLD+S +Q + G+VGQ+ AR+A GVI+++I+ K+
Sbjct: 2 KIEEVKSTTKTQRIASHSHVKGLGLDESGLAKQAASGLVGQENAREACGVIVELIKSKKM 61
Query: 320 AGRAVLLAGQPGTGKTAIAMGLAQALGPDTPFTSMAGSEIFSLEMSKTEALTQAIR 487
AGRAVLLAG PGTGKTA+A+ +AQ LG PF M GSE++S E+ KTE L + R
Sbjct: 62 AGRAVLLAGPPGTGKTALALAIAQELGSKVPFCPMVGSEVYSTEIKKTEVLMENFR 117
>AF099084-1|AAD04427.1| 456|Homo sapiens Pontin52 protein.
Length = 456
Score = 138 bits (333), Expect = 2e-32
Identities = 62/116 (53%), Positives = 89/116 (76%)
Frame = +2
Query: 140 QVQEVRSITRIERIGAHSHIRGLGLDDSLEPRQVSQGMVGQKMARKAAGVILQMIREGKI 319
+++EV+S T+ +RI +HSH++GLGLD+S +Q + G+VGQ+ AR+A GVI+++I+ K+
Sbjct: 2 KIEEVKSTTKTQRIASHSHVKGLGLDESGLAKQAASGLVGQENAREACGVIVELIKSKKM 61
Query: 320 AGRAVLLAGQPGTGKTAIAMGLAQALGPDTPFTSMAGSEIFSLEMSKTEALTQAIR 487
AGRAVLLAG PGTGKTA+A+ +AQ LG PF M GSE++S E+ KTE L + R
Sbjct: 62 AGRAVLLAGPPGTGKTALALAIAQELGSKVPFCPMVGSEVYSTEIKKTEVLMENFR 117
>AF070735-1|AAC77819.1| 456|Homo sapiens RuvB-like protein RUVBL1
protein.
Length = 456
Score = 138 bits (333), Expect = 2e-32
Identities = 62/116 (53%), Positives = 89/116 (76%)
Frame = +2
Query: 140 QVQEVRSITRIERIGAHSHIRGLGLDDSLEPRQVSQGMVGQKMARKAAGVILQMIREGKI 319
+++EV+S T+ +RI +HSH++GLGLD+S +Q + G+VGQ+ AR+A GVI+++I+ K+
Sbjct: 2 KIEEVKSTTKTQRIASHSHVKGLGLDESGLAKQAASGLVGQENAREACGVIVELIKSKKM 61
Query: 320 AGRAVLLAGQPGTGKTAIAMGLAQALGPDTPFTSMAGSEIFSLEMSKTEALTQAIR 487
AGRAVLLAG PGTGKTA+A+ +AQ LG PF M GSE++S E+ KTE L + R
Sbjct: 62 AGRAVLLAGPPGTGKTALALAIAQELGSKVPFCPMVGSEVYSTEIKKTEVLMENFR 117
>AB012122-1|BAA28169.1| 456|Homo sapiens TIP49 protein.
Length = 456
Score = 138 bits (333), Expect = 2e-32
Identities = 62/116 (53%), Positives = 89/116 (76%)
Frame = +2
Query: 140 QVQEVRSITRIERIGAHSHIRGLGLDDSLEPRQVSQGMVGQKMARKAAGVILQMIREGKI 319
+++EV+S T+ +RI +HSH++GLGLD+S +Q + G+VGQ+ AR+A GVI+++I+ K+
Sbjct: 2 KIEEVKSTTKTQRIASHSHVKGLGLDESGLAKQAASGLVGQENAREACGVIVELIKSKKM 61
Query: 320 AGRAVLLAGQPGTGKTAIAMGLAQALGPDTPFTSMAGSEIFSLEMSKTEALTQAIR 487
AGRAVLLAG PGTGKTA+A+ +AQ LG PF M GSE++S E+ KTE L + R
Sbjct: 62 AGRAVLLAGPPGTGKTALALAIAQELGSKVPFCPMVGSEVYSTEIKKTEVLMENFR 117
>AK222563-1|BAD96283.1| 456|Homo sapiens TATA binding protein
interacting protein 49 kDa variant protein.
Length = 456
Score = 136 bits (328), Expect = 9e-32
Identities = 61/116 (52%), Positives = 88/116 (75%)
Frame = +2
Query: 140 QVQEVRSITRIERIGAHSHIRGLGLDDSLEPRQVSQGMVGQKMARKAAGVILQMIREGKI 319
+++EV+S T+ +RI +HSH++GLGLD+S +Q + G+VGQ+ AR+A GV +++I+ K+
Sbjct: 2 KIEEVKSTTKTQRIASHSHVKGLGLDESGLAKQAASGLVGQENAREACGVTVELIKSKKM 61
Query: 320 AGRAVLLAGQPGTGKTAIAMGLAQALGPDTPFTSMAGSEIFSLEMSKTEALTQAIR 487
AGRAVLLAG PGTGKTA+A+ +AQ LG PF M GSE++S E+ KTE L + R
Sbjct: 62 AGRAVLLAGPPGTGKTALALAIAQELGSKVPFCPMVGSEVYSTEIKKTEVLMENFR 117
>BC048217-1|AAH48217.1| 695|Homo sapiens SPATA5 protein protein.
Length = 695
Score = 37.1 bits (82), Expect = 0.055
Identities = 24/55 (43%), Positives = 30/55 (54%)
Frame = +2
Query: 320 AGRAVLLAGQPGTGKTAIAMGLAQALGPDTPFTSMAGSEIFSLEMSKTEALTQAI 484
A R VLL G PGTGKT IA +A +G + + G EI S +TEA + I
Sbjct: 385 APRGVLLYGPPGTGKTMIARAVANEVG--AYVSVINGPEIISKFYGETEAKLRQI 437
>AK091384-1|BAC03651.1| 893|Homo sapiens protein ( Homo sapiens
cDNA FLJ34065 fis, clone FCBBF3000536, highly similar to
Mus musculus spermatogenesis associated factor (SPAF)
mRNA. ).
Length = 893
Score = 37.1 bits (82), Expect = 0.055
Identities = 24/55 (43%), Positives = 30/55 (54%)
Frame = +2
Query: 320 AGRAVLLAGQPGTGKTAIAMGLAQALGPDTPFTSMAGSEIFSLEMSKTEALTQAI 484
A R VLL G PGTGKT IA +A +G + + G EI S +TEA + I
Sbjct: 386 APRGVLLYGPPGTGKTMIARAVANEVG--AYVSVINGPEIISKFYGETEAKLRQI 438
Score = 31.5 bits (68), Expect = 2.7
Identities = 20/55 (36%), Positives = 29/55 (52%)
Frame = +2
Query: 302 IREGKIAGRAVLLAGQPGTGKTAIAMGLAQALGPDTPFTSMAGSEIFSLEMSKTE 466
IR G + VLL G PG KT IA LA G + F ++ G E+ + + ++E
Sbjct: 654 IRMGIQPPKGVLLYGPPGCSKTMIAKALANESGLN--FLAIKGPELMNKYVGESE 706
>AF479656-1|AAM43608.1| 790|Homo sapiens spermatogenesis associated
factor protein protein.
Length = 790
Score = 37.1 bits (82), Expect = 0.055
Identities = 24/55 (43%), Positives = 30/55 (54%)
Frame = +2
Query: 320 AGRAVLLAGQPGTGKTAIAMGLAQALGPDTPFTSMAGSEIFSLEMSKTEALTQAI 484
A R VLL G PGTGKT IA +A +G + + G EI S +TEA + I
Sbjct: 386 APRGVLLYGPPGTGKTMIARAVANEVG--AYVSVINGPEIISKFYGETEAKLRQI 438
Score = 33.5 bits (73), Expect = 0.68
Identities = 21/55 (38%), Positives = 30/55 (54%)
Frame = +2
Query: 302 IREGKIAGRAVLLAGQPGTGKTAIAMGLAQALGPDTPFTSMAGSEIFSLEMSKTE 466
IR G + VLL G PG KT IA LA G + F ++ GSE+ + + ++E
Sbjct: 654 IRMGIQPPKGVLLYGPPGCSKTMIAKALANESGLN--FLAIKGSELMNKYVGESE 706
>AF361489-1|AAM00262.1| 893|Homo sapiens spermatogenesis associated
factor protein.
Length = 893
Score = 37.1 bits (82), Expect = 0.055
Identities = 24/55 (43%), Positives = 30/55 (54%)
Frame = +2
Query: 320 AGRAVLLAGQPGTGKTAIAMGLAQALGPDTPFTSMAGSEIFSLEMSKTEALTQAI 484
A R VLL G PGTGKT IA +A +G + + G EI S +TEA + I
Sbjct: 386 APRGVLLYGPPGTGKTMIARAVANEVG--AYVSVINGPEIISKFYGETEAKLRQI 438
Score = 31.5 bits (68), Expect = 2.7
Identities = 20/55 (36%), Positives = 29/55 (52%)
Frame = +2
Query: 302 IREGKIAGRAVLLAGQPGTGKTAIAMGLAQALGPDTPFTSMAGSEIFSLEMSKTE 466
IR G + VLL G PG KT IA LA G + F ++ G E+ + + ++E
Sbjct: 654 IRMGIQPPKGVLLYGPPGCSKTMIAKALANESGLN--FLAIKGPELMNKYVGESE 706
>U78772-1|AAB70460.1| 750|Homo sapiens nuclear VCP-like protein
NVLp.1 protein.
Length = 750
Score = 36.7 bits (81), Expect = 0.073
Identities = 19/58 (32%), Positives = 32/58 (55%)
Frame = +2
Query: 311 GKIAGRAVLLAGQPGTGKTAIAMGLAQALGPDTPFTSMAGSEIFSLEMSKTEALTQAI 484
G + VLLAG PG GKT +A +A G + F S+ G E+ ++ + ++E + +
Sbjct: 505 GLVTPAGVLLAGPPGCGKTLLAKAVANESGLN--FISVKGPELLNMYVGESERAVRQV 560
Score = 34.7 bits (76), Expect = 0.29
Identities = 20/45 (44%), Positives = 24/45 (53%)
Frame = +2
Query: 311 GKIAGRAVLLAGQPGTGKTAIAMGLAQALGPDTPFTSMAGSEIFS 445
G + R VLL G PG GKT +A +A L D P +A EI S
Sbjct: 188 GVVPPRGVLLHGPPGCGKTLLAHAIAGEL--DLPILKVAAPEIVS 230
>U68140-1|AAB70457.1| 856|Homo sapiens nuclear VCP-like protein
NVLp.2 protein.
Length = 856
Score = 36.7 bits (81), Expect = 0.073
Identities = 19/58 (32%), Positives = 32/58 (55%)
Frame = +2
Query: 311 GKIAGRAVLLAGQPGTGKTAIAMGLAQALGPDTPFTSMAGSEIFSLEMSKTEALTQAI 484
G + VLLAG PG GKT +A +A G + F S+ G E+ ++ + ++E + +
Sbjct: 611 GLVTPAGVLLAGPPGCGKTLLAKAVANESGLN--FISVKGPELLNMYVGESERAVRQV 666
Score = 34.7 bits (76), Expect = 0.29
Identities = 20/45 (44%), Positives = 24/45 (53%)
Frame = +2
Query: 311 GKIAGRAVLLAGQPGTGKTAIAMGLAQALGPDTPFTSMAGSEIFS 445
G + R VLL G PG GKT +A +A L D P +A EI S
Sbjct: 294 GVVPPRGVLLHGPPGCGKTLLAHAIAGEL--DLPILKVAAPEIVS 336
>BC012105-1|AAH12105.1| 659|Homo sapiens NVL protein protein.
Length = 659
Score = 36.7 bits (81), Expect = 0.073
Identities = 19/58 (32%), Positives = 32/58 (55%)
Frame = +2
Query: 311 GKIAGRAVLLAGQPGTGKTAIAMGLAQALGPDTPFTSMAGSEIFSLEMSKTEALTQAI 484
G + VLLAG PG GKT +A +A G + F S+ G E+ ++ + ++E + +
Sbjct: 414 GLVTPAGVLLAGPPGCGKTLLAKAVANESGLN--FISVKGPELLNMYVGESERAVRQV 469
Score = 34.7 bits (76), Expect = 0.29
Identities = 20/45 (44%), Positives = 24/45 (53%)
Frame = +2
Query: 311 GKIAGRAVLLAGQPGTGKTAIAMGLAQALGPDTPFTSMAGSEIFS 445
G + R VLL G PG GKT +A +A L D P +A EI S
Sbjct: 97 GVVPPRGVLLHGPPGCGKTLLAHAIAGEL--DLPILKVAAPEIVS 139
>BC047932-1|AAH47932.1| 437|Homo sapiens vacuolar protein sorting 4
homolog A (S. cerevisiae) protein.
Length = 437
Score = 35.5 bits (78), Expect = 0.17
Identities = 26/81 (32%), Positives = 42/81 (51%), Gaps = 4/81 (4%)
Frame = +2
Query: 248 GMVGQKMARKAAGVI---LQMIREGK-IAGRAVLLAGQPGTGKTAIAMGLAQALGPDTPF 415
G+ G K A K A ++ + GK R +LL G PGTGK+ +A +A T F
Sbjct: 131 GLEGAKEALKEAVILPIKFPHLFTGKRTPWRGILLFGPPGTGKSYLAKAVATEANNST-F 189
Query: 416 TSMAGSEIFSLEMSKTEALTQ 478
S++ S++ S + ++E L +
Sbjct: 190 FSVSSSDLMSKWLGESEKLVK 210
>AF282903-1|AAG01470.1| 437|Homo sapiens vacuolar protein sorting
factor 4A protein.
Length = 437
Score = 35.5 bits (78), Expect = 0.17
Identities = 26/81 (32%), Positives = 42/81 (51%), Gaps = 4/81 (4%)
Frame = +2
Query: 248 GMVGQKMARKAAGVI---LQMIREGK-IAGRAVLLAGQPGTGKTAIAMGLAQALGPDTPF 415
G+ G K A K A ++ + GK R +LL G PGTGK+ +A +A T F
Sbjct: 131 GLEGAKEALKEAVILPIKFPHLFTGKRTPWRGILLFGPPGTGKSYLAKAVATEANNST-F 189
Query: 416 TSMAGSEIFSLEMSKTEALTQ 478
S++ S++ S + ++E L +
Sbjct: 190 FSVSSSDLMSKWLGESEKLVK 210
>AF255952-1|AAK52408.1| 437|Homo sapiens vacuolar protein sorting
VPS4-1 protein.
Length = 437
Score = 35.5 bits (78), Expect = 0.17
Identities = 26/81 (32%), Positives = 42/81 (51%), Gaps = 4/81 (4%)
Frame = +2
Query: 248 GMVGQKMARKAAGVI---LQMIREGK-IAGRAVLLAGQPGTGKTAIAMGLAQALGPDTPF 415
G+ G K A K A ++ + GK R +LL G PGTGK+ +A +A T F
Sbjct: 131 GLEGAKEALKEAVILPIKFPHLFTGKRTPWRGILLFGPPGTGKSYLAKAVATEANNST-F 189
Query: 416 TSMAGSEIFSLEMSKTEALTQ 478
S++ S++ S + ++E L +
Sbjct: 190 FSVSSSDLMSKWLGESEKLVK 210
>AF159063-1|AAD49227.1| 437|Homo sapiens SKD1-homolog protein.
Length = 437
Score = 35.5 bits (78), Expect = 0.17
Identities = 26/81 (32%), Positives = 42/81 (51%), Gaps = 4/81 (4%)
Frame = +2
Query: 248 GMVGQKMARKAAGVI---LQMIREGK-IAGRAVLLAGQPGTGKTAIAMGLAQALGPDTPF 415
G+ G K A K A ++ + GK R +LL G PGTGK+ +A +A T F
Sbjct: 131 GLEGAKEALKEAVILPIKFPHLFTGKRTPWRGILLFGPPGTGKSYLAKAVATEANNST-F 189
Query: 416 TSMAGSEIFSLEMSKTEALTQ 478
S++ S++ S + ++E L +
Sbjct: 190 FSVSSSDLMSKWLGESEKLVK 210
>AF155740-1|AAD42971.1| 432|Homo sapiens vacuolar sorting protein 4
protein.
Length = 432
Score = 35.5 bits (78), Expect = 0.17
Identities = 26/81 (32%), Positives = 42/81 (51%), Gaps = 4/81 (4%)
Frame = +2
Query: 248 GMVGQKMARKAAGVI---LQMIREGK-IAGRAVLLAGQPGTGKTAIAMGLAQALGPDTPF 415
G+ G K A K A ++ + GK R +LL G PGTGK+ +A +A T F
Sbjct: 126 GLEGAKEALKEAVILPIKFPHLFTGKRTPWRGILLFGPPGTGKSYLAKAVATEANNST-F 184
Query: 416 TSMAGSEIFSLEMSKTEALTQ 478
S++ S++ S + ++E L +
Sbjct: 185 FSVSSSDLMSKWLGESEKLVK 205
>AF112215-1|AAF17203.1| 437|Homo sapiens SKD1 protein protein.
Length = 437
Score = 35.5 bits (78), Expect = 0.17
Identities = 26/81 (32%), Positives = 42/81 (51%), Gaps = 4/81 (4%)
Frame = +2
Query: 248 GMVGQKMARKAAGVI---LQMIREGK-IAGRAVLLAGQPGTGKTAIAMGLAQALGPDTPF 415
G+ G K A K A ++ + GK R +LL G PGTGK+ +A +A T F
Sbjct: 131 GLEGAKEALKEAVILPIKFPHLFTGKRTPWRGILLFGPPGTGKSYLAKAVATEANNST-F 189
Query: 416 TSMAGSEIFSLEMSKTEALTQ 478
S++ S++ S + ++E L +
Sbjct: 190 FSVSSSDLMSKWLGESEKLVK 210
>BC039574-1|AAH39574.1| 444|Homo sapiens vacuolar protein sorting 4
homolog B (S. cerevisiae) protein.
Length = 444
Score = 35.1 bits (77), Expect = 0.22
Identities = 26/81 (32%), Positives = 42/81 (51%), Gaps = 4/81 (4%)
Frame = +2
Query: 248 GMVGQKMARKAAGVI---LQMIREGK-IAGRAVLLAGQPGTGKTAIAMGLAQALGPDTPF 415
G+ G K A K A ++ + GK R +LL G PGTGK+ +A +A T F
Sbjct: 138 GLEGAKEALKEAVILPIKFPHLFTGKRTPWRGILLFGPPGTGKSYLAKAVATEANNST-F 196
Query: 416 TSMAGSEIFSLEMSKTEALTQ 478
S++ S++ S + ++E L +
Sbjct: 197 FSISSSDLVSKWLGESEKLVK 217
>AY232629-1|AAP59551.1| 444|Homo sapiens cell migration-inducing 1
protein.
Length = 444
Score = 35.1 bits (77), Expect = 0.22
Identities = 26/81 (32%), Positives = 42/81 (51%), Gaps = 4/81 (4%)
Frame = +2
Query: 248 GMVGQKMARKAAGVI---LQMIREGK-IAGRAVLLAGQPGTGKTAIAMGLAQALGPDTPF 415
G+ G K A K A ++ + GK R +LL G PGTGK+ +A +A T F
Sbjct: 138 GLEGAKEALKEAVILPIKFPHLFTGKRTPWRGILLFGPPGTGKSYLAKAVATEANNST-F 196
Query: 416 TSMAGSEIFSLEMSKTEALTQ 478
S++ S++ S + ++E L +
Sbjct: 197 FSISSSDLVSKWLGESEKLVK 217
>AF282904-1|AAG01471.1| 444|Homo sapiens vacuolar protein sorting
factor 4B protein.
Length = 444
Score = 35.1 bits (77), Expect = 0.22
Identities = 26/81 (32%), Positives = 42/81 (51%), Gaps = 4/81 (4%)
Frame = +2
Query: 248 GMVGQKMARKAAGVI---LQMIREGK-IAGRAVLLAGQPGTGKTAIAMGLAQALGPDTPF 415
G+ G K A K A ++ + GK R +LL G PGTGK+ +A +A T F
Sbjct: 138 GLEGAKEALKEAVILPIKFPHLFTGKRTPWRGILLFGPPGTGKSYLAKAVATEANNST-F 196
Query: 416 TSMAGSEIFSLEMSKTEALTQ 478
S++ S++ S + ++E L +
Sbjct: 197 FSISSSDLVSKWLGESEKLVK 217
>AF195514-1|AAG33022.1| 444|Homo sapiens VPS4-2 ATPase protein.
Length = 444
Score = 35.1 bits (77), Expect = 0.22
Identities = 26/81 (32%), Positives = 42/81 (51%), Gaps = 4/81 (4%)
Frame = +2
Query: 248 GMVGQKMARKAAGVI---LQMIREGK-IAGRAVLLAGQPGTGKTAIAMGLAQALGPDTPF 415
G+ G K A K A ++ + GK R +LL G PGTGK+ +A +A T F
Sbjct: 138 GLEGAKEALKEAVILPIKFPHLFTGKRTPWRGILLFGPPGTGKSYLAKAVATEANNST-F 196
Query: 416 TSMAGSEIFSLEMSKTEALTQ 478
S++ S++ S + ++E L +
Sbjct: 197 FSISSSDLVSKWLGESEKLVK 217
>BC024032-1|AAH24032.1| 716|Homo sapiens YME1-like 1 (S.
cerevisiae) protein.
Length = 716
Score = 34.7 bits (76), Expect = 0.29
Identities = 26/87 (29%), Positives = 46/87 (52%), Gaps = 11/87 (12%)
Frame = +2
Query: 209 GLDDSLEPRQVS----QGMVGQKMARKAAGVILQMIREGK---IAG----RAVLLAGQPG 355
GLD +++P Q+ + + G + A++ +++ ++ + I G + +LL G PG
Sbjct: 266 GLDSAVDPVQMKNVTFEHVKGVEEAKQELQEVVEFLKNPQKFTILGGKLPKGILLVGPPG 325
Query: 356 TGKTAIAMGLAQALGPDTPFTSMAGSE 436
TGKT +A +A D PF +GSE
Sbjct: 326 TGKTLLARAVAGE--ADVPFYYASGSE 350
>BC023507-1|AAH23507.1| 716|Homo sapiens YME1-like 1 (S.
cerevisiae) protein.
Length = 716
Score = 34.7 bits (76), Expect = 0.29
Identities = 26/87 (29%), Positives = 46/87 (52%), Gaps = 11/87 (12%)
Frame = +2
Query: 209 GLDDSLEPRQVS----QGMVGQKMARKAAGVILQMIREGK---IAG----RAVLLAGQPG 355
GLD +++P Q+ + + G + A++ +++ ++ + I G + +LL G PG
Sbjct: 266 GLDSAVDPVQMKNVTFEHVKGVEEAKQELQEVVEFLKNPQKFTILGGKLPKGILLVGPPG 325
Query: 356 TGKTAIAMGLAQALGPDTPFTSMAGSE 436
TGKT +A +A D PF +GSE
Sbjct: 326 TGKTLLARAVAGE--ADVPFYYASGSE 350
>BC007795-1|AAH07795.1| 740|Homo sapiens YME1-like 1 (S.
cerevisiae) protein.
Length = 740
Score = 34.7 bits (76), Expect = 0.29
Identities = 26/87 (29%), Positives = 46/87 (52%), Gaps = 11/87 (12%)
Frame = +2
Query: 209 GLDDSLEPRQVS----QGMVGQKMARKAAGVILQMIREGK---IAG----RAVLLAGQPG 355
GLD +++P Q+ + + G + A++ +++ ++ + I G + +LL G PG
Sbjct: 323 GLDSAVDPVQMKNVTFEHVKGVEEAKQELQEVVEFLKNPQKFTILGGKLPKGILLVGPPG 382
Query: 356 TGKTAIAMGLAQALGPDTPFTSMAGSE 436
TGKT +A +A D PF +GSE
Sbjct: 383 TGKTLLARAVAGE--ADVPFYYASGSE 407
>AY358484-1|AAQ88848.1| 716|Homo sapiens YME1L1 protein.
Length = 716
Score = 34.7 bits (76), Expect = 0.29
Identities = 26/87 (29%), Positives = 46/87 (52%), Gaps = 11/87 (12%)
Frame = +2
Query: 209 GLDDSLEPRQVS----QGMVGQKMARKAAGVILQMIREGK---IAG----RAVLLAGQPG 355
GLD +++P Q+ + + G + A++ +++ ++ + I G + +LL G PG
Sbjct: 266 GLDSAVDPVQMKNVTFEHVKGVEEAKQELQEVVEFLKNPQKFTILGGKLPKGILLVGPPG 325
Query: 356 TGKTAIAMGLAQALGPDTPFTSMAGSE 436
TGKT +A +A D PF +GSE
Sbjct: 326 TGKTLLARAVAGE--ADVPFYYASGSE 350
>AL162272-2|CAI12217.1| 716|Homo sapiens YME1-like 1 (S.
cerevisiae) protein.
Length = 716
Score = 34.7 bits (76), Expect = 0.29
Identities = 26/87 (29%), Positives = 46/87 (52%), Gaps = 11/87 (12%)
Frame = +2
Query: 209 GLDDSLEPRQVS----QGMVGQKMARKAAGVILQMIREGK---IAG----RAVLLAGQPG 355
GLD +++P Q+ + + G + A++ +++ ++ + I G + +LL G PG
Sbjct: 266 GLDSAVDPVQMKNVTFEHVKGVEEAKQELQEVVEFLKNPQKFTILGGKLPKGILLVGPPG 325
Query: 356 TGKTAIAMGLAQALGPDTPFTSMAGSE 436
TGKT +A +A D PF +GSE
Sbjct: 326 TGKTLLARAVAGE--ADVPFYYASGSE 350
>AL162272-1|CAC19650.2| 773|Homo sapiens YME1-like 1 (S.
cerevisiae) protein.
Length = 773
Score = 34.7 bits (76), Expect = 0.29
Identities = 26/87 (29%), Positives = 46/87 (52%), Gaps = 11/87 (12%)
Frame = +2
Query: 209 GLDDSLEPRQVS----QGMVGQKMARKAAGVILQMIREGK---IAG----RAVLLAGQPG 355
GLD +++P Q+ + + G + A++ +++ ++ + I G + +LL G PG
Sbjct: 323 GLDSAVDPVQMKNVTFEHVKGVEEAKQELQEVVEFLKNPQKFTILGGKLPKGILLVGPPG 382
Query: 356 TGKTAIAMGLAQALGPDTPFTSMAGSE 436
TGKT +A +A D PF +GSE
Sbjct: 383 TGKTLLARAVAGE--ADVPFYYASGSE 407
>AL160291-4|CAI16906.1| 716|Homo sapiens YME1-like 1 (S.
cerevisiae) protein.
Length = 716
Score = 34.7 bits (76), Expect = 0.29
Identities = 26/87 (29%), Positives = 46/87 (52%), Gaps = 11/87 (12%)
Frame = +2
Query: 209 GLDDSLEPRQVS----QGMVGQKMARKAAGVILQMIREGK---IAG----RAVLLAGQPG 355
GLD +++P Q+ + + G + A++ +++ ++ + I G + +LL G PG
Sbjct: 266 GLDSAVDPVQMKNVTFEHVKGVEEAKQELQEVVEFLKNPQKFTILGGKLPKGILLVGPPG 325
Query: 356 TGKTAIAMGLAQALGPDTPFTSMAGSE 436
TGKT +A +A D PF +GSE
Sbjct: 326 TGKTLLARAVAGE--ADVPFYYASGSE 350
>AL160291-3|CAI16907.1| 773|Homo sapiens YME1-like 1 (S.
cerevisiae) protein.
Length = 773
Score = 34.7 bits (76), Expect = 0.29
Identities = 26/87 (29%), Positives = 46/87 (52%), Gaps = 11/87 (12%)
Frame = +2
Query: 209 GLDDSLEPRQVS----QGMVGQKMARKAAGVILQMIREGK---IAG----RAVLLAGQPG 355
GLD +++P Q+ + + G + A++ +++ ++ + I G + +LL G PG
Sbjct: 323 GLDSAVDPVQMKNVTFEHVKGVEEAKQELQEVVEFLKNPQKFTILGGKLPKGILLVGPPG 382
Query: 356 TGKTAIAMGLAQALGPDTPFTSMAGSE 436
TGKT +A +A D PF +GSE
Sbjct: 383 TGKTLLARAVAGE--ADVPFYYASGSE 407
>AJ295618-1|CAB99462.1| 517|Homo sapiens putative ATPases protein.
Length = 517
Score = 34.7 bits (76), Expect = 0.29
Identities = 26/87 (29%), Positives = 46/87 (52%), Gaps = 11/87 (12%)
Frame = +2
Query: 209 GLDDSLEPRQVS----QGMVGQKMARKAAGVILQMIREGK---IAG----RAVLLAGQPG 355
GLD +++P Q+ + + G + A++ +++ ++ + I G + +LL G PG
Sbjct: 69 GLDSAVDPVQMKNVTFEHVKGVEEAKQELQEVVEFLKNPQKFTILGGKLPKGILLVGPPG 128
Query: 356 TGKTAIAMGLAQALGPDTPFTSMAGSE 436
TGKT +A +A D PF +GSE
Sbjct: 129 TGKTLLARAVAGE--ADVPFYYASGSE 153
>AJ132637-1|CAB51858.1| 716|Homo sapiens ATP-dependent
metalloprotease YME1L protein.
Length = 716
Score = 34.7 bits (76), Expect = 0.29
Identities = 26/87 (29%), Positives = 46/87 (52%), Gaps = 11/87 (12%)
Frame = +2
Query: 209 GLDDSLEPRQVS----QGMVGQKMARKAAGVILQMIREGK---IAG----RAVLLAGQPG 355
GLD +++P Q+ + + G + A++ +++ ++ + I G + +LL G PG
Sbjct: 266 GLDSAVDPVQMKNVTFEHVKGVEEAKQELQEVVEFLKNPQKFTILGGKLPKGILLVGPPG 325
Query: 356 TGKTAIAMGLAQALGPDTPFTSMAGSE 436
TGKT +A +A D PF +GSE
Sbjct: 326 TGKTLLARAVAGE--ADVPFYYASGSE 350
>AF151782-1|AAK57555.1| 773|Homo sapiens ATP-dependent
metalloprotease FtsH1 homolog protein.
Length = 773
Score = 34.7 bits (76), Expect = 0.29
Identities = 26/87 (29%), Positives = 46/87 (52%), Gaps = 11/87 (12%)
Frame = +2
Query: 209 GLDDSLEPRQVS----QGMVGQKMARKAAGVILQMIREGK---IAG----RAVLLAGQPG 355
GLD +++P Q+ + + G + A++ +++ ++ + I G + +LL G PG
Sbjct: 323 GLDSAVDPVQMKNVTFEHVKGVEEAKQELQEVVEFLKNPQKFTILGGKLPKGILLVGPPG 382
Query: 356 TGKTAIAMGLAQALGPDTPFTSMAGSE 436
TGKT +A +A D PF +GSE
Sbjct: 383 TGKTLLARAVAGE--ADVPFYYASGSE 407
>BC000981-1|AAH00981.1| 753|Homo sapiens spermatogenesis associated
5-like 1 protein.
Length = 753
Score = 34.3 bits (75), Expect = 0.39
Identities = 21/65 (32%), Positives = 34/65 (52%), Gaps = 1/65 (1%)
Frame = +2
Query: 296 QMIREGKIAGRAVLLAGQPGTGKTAIAMGLAQALGPDTPFTSMAGSEIFSLEMSKTE-AL 472
+ +R G + VLL G PG KT + LA + F S++G+++FS + +E L
Sbjct: 489 EFVRMGLTQPKGVLLYGPPGCAKTTLVRALATSC--HCSFVSVSGADLFSPFVGDSEKVL 546
Query: 473 TQAIR 487
+Q R
Sbjct: 547 SQIFR 551
Score = 31.5 bits (68), Expect = 2.7
Identities = 14/32 (43%), Positives = 18/32 (56%)
Frame = +2
Query: 311 GKIAGRAVLLAGQPGTGKTAIAMGLAQALGPD 406
G R VLLAG PG GKT + +A+ G +
Sbjct: 230 GLAVPRGVLLAGPPGVGKTQLVQAVAREAGAE 261
>BC000612-1|AAH00612.1| 490|Homo sapiens katanin p60 subunit A-like
1 protein.
Length = 490
Score = 34.3 bits (75), Expect = 0.39
Identities = 18/53 (33%), Positives = 30/53 (56%)
Frame = +2
Query: 326 RAVLLAGQPGTGKTAIAMGLAQALGPDTPFTSMAGSEIFSLEMSKTEALTQAI 484
+ VL+ G PGTGKT +A +A G T F +++ S + S ++E L + +
Sbjct: 242 KGVLMVGPPGTGKTMLAKAVATECG--TTFFNVSSSTLTSKYRGESEKLVRLL 292
>AL356750-1|CAI13718.1| 490|Homo sapiens katanin p60 subunit A-like
1 protein.
Length = 490
Score = 34.3 bits (75), Expect = 0.39
Identities = 18/53 (33%), Positives = 30/53 (56%)
Frame = +2
Query: 326 RAVLLAGQPGTGKTAIAMGLAQALGPDTPFTSMAGSEIFSLEMSKTEALTQAI 484
+ VL+ G PGTGKT +A +A G T F +++ S + S ++E L + +
Sbjct: 242 KGVLMVGPPGTGKTMLAKAVATECG--TTFFNVSSSTLTSKYRGESEKLVRLL 292
>AK023232-1|BAB14482.1| 620|Homo sapiens protein ( Homo sapiens
cDNA FLJ13170 fis, clone NT2RP3003809, weakly similar to
SAV PROTEIN. ).
Length = 620
Score = 34.3 bits (75), Expect = 0.39
Identities = 21/65 (32%), Positives = 34/65 (52%), Gaps = 1/65 (1%)
Frame = +2
Query: 296 QMIREGKIAGRAVLLAGQPGTGKTAIAMGLAQALGPDTPFTSMAGSEIFSLEMSKTE-AL 472
+ +R G + VLL G PG KT + LA + F S++G+++FS + +E L
Sbjct: 489 EFVRMGLTQPKGVLLYGPPGCAKTTLVRALATSC--HCSFVSVSGADLFSPFVGDSEKVL 546
Query: 473 TQAIR 487
+Q R
Sbjct: 547 SQIFR 551
Score = 31.5 bits (68), Expect = 2.7
Identities = 14/32 (43%), Positives = 18/32 (56%)
Frame = +2
Query: 311 GKIAGRAVLLAGQPGTGKTAIAMGLAQALGPD 406
G R VLLAG PG GKT + +A+ G +
Sbjct: 230 GLAVPRGVLLAGPPGVGKTQLVQAVAREAGAE 261
>AL391244-1|CAI22656.1| 473|Homo sapiens ATPase family, AAA domain
containing 3C protein.
Length = 473
Score = 33.9 bits (74), Expect = 0.51
Identities = 31/100 (31%), Positives = 49/100 (49%), Gaps = 4/100 (4%)
Frame = +2
Query: 152 VRSITRIERIGAHSH-IRGLGLDDSLEPRQVSQGMVGQKM--AR-KAAGVILQMIREGKI 319
VR +RI + A H I+ + P+ V +G+V AR + ++ + I++ +
Sbjct: 109 VRETSRITVLEALRHPIQQVSRRLLSRPQDVLEGVVLSPSLEARVRDIAIMTRNIKKNRG 168
Query: 320 AGRAVLLAGQPGTGKTAIAMGLAQALGPDTPFTSMAGSEI 439
R +LL G PGTGKT A LA G D + M G ++
Sbjct: 169 LYRHILLYGPPGTGKTLFAKKLALHSGMD--YAIMTGGDV 206
>AL157945-1|CAI22067.1| 473|Homo sapiens ATPase family, AAA domain
containing 3C protein.
Length = 473
Score = 33.9 bits (74), Expect = 0.51
Identities = 31/100 (31%), Positives = 49/100 (49%), Gaps = 4/100 (4%)
Frame = +2
Query: 152 VRSITRIERIGAHSH-IRGLGLDDSLEPRQVSQGMVGQKM--AR-KAAGVILQMIREGKI 319
VR +RI + A H I+ + P+ V +G+V AR + ++ + I++ +
Sbjct: 109 VRETSRITVLEALRHPIQQVSRRLLSRPQDVLEGVVLSPSLEARVRDIAIMTRNIKKNRG 168
Query: 320 AGRAVLLAGQPGTGKTAIAMGLAQALGPDTPFTSMAGSEI 439
R +LL G PGTGKT A LA G D + M G ++
Sbjct: 169 LYRHILLYGPPGTGKTLFAKKLALHSGMD--YAIMTGGDV 206
>BT007058-1|AAP35707.1| 320|Homo sapiens replication factor C
(activator 1) 2, 40kDa protein.
Length = 320
Score = 33.5 bits (73), Expect = 0.68
Identities = 23/61 (37%), Positives = 33/61 (54%)
Frame = +2
Query: 305 REGKIAGRAVLLAGQPGTGKTAIAMGLAQALGPDTPFTSMAGSEIFSLEMSKTEALTQAI 484
REG + +++AG PGTGKT + LA+AL P A E+ + S T+ QA+
Sbjct: 65 REGNVPN--IIIAGPPGTGKTTSILCLARAL--LGPALKDAMLELNASNDSMTDGAQQAL 120
Query: 485 R 487
R
Sbjct: 121 R 121
>BC002813-1|AAH02813.1| 320|Homo sapiens replication factor C
(activator 1) 2, 40kDa protein.
Length = 320
Score = 33.5 bits (73), Expect = 0.68
Identities = 23/61 (37%), Positives = 33/61 (54%)
Frame = +2
Query: 305 REGKIAGRAVLLAGQPGTGKTAIAMGLAQALGPDTPFTSMAGSEIFSLEMSKTEALTQAI 484
REG + +++AG PGTGKT + LA+AL P A E+ + S T+ QA+
Sbjct: 65 REGNVPN--IIIAGPPGTGKTTSILCLARAL--LGPALKDAMLELNASNDSMTDGAQQAL 120
Query: 485 R 487
R
Sbjct: 121 R 121
>AF483622-1|AAL82503.1| 320|Homo sapiens replication factor C
(activator 1) 2 (40kD) protein.
Length = 320
Score = 33.5 bits (73), Expect = 0.68
Identities = 23/61 (37%), Positives = 33/61 (54%)
Frame = +2
Query: 305 REGKIAGRAVLLAGQPGTGKTAIAMGLAQALGPDTPFTSMAGSEIFSLEMSKTEALTQAI 484
REG + +++AG PGTGKT + LA+AL P A E+ + S T+ QA+
Sbjct: 65 REGNVPN--IIIAGPPGTGKTTSILCLARAL--LGPALKDAMLELNASNDSMTDGAQQAL 120
Query: 485 R 487
R
Sbjct: 121 R 121
>AC005081-2|AAP22335.1| 320|Homo sapiens unknown protein.
Length = 320
Score = 33.5 bits (73), Expect = 0.68
Identities = 23/61 (37%), Positives = 33/61 (54%)
Frame = +2
Query: 305 REGKIAGRAVLLAGQPGTGKTAIAMGLAQALGPDTPFTSMAGSEIFSLEMSKTEALTQAI 484
REG + +++AG PGTGKT + LA+AL P A E+ + S T+ QA+
Sbjct: 65 REGNVPN--IIIAGPPGTGKTTSILCLARAL--LGPALKDAMLELNASNDSMTDGAQQAL 120
Query: 485 R 487
R
Sbjct: 121 R 121
>U96131-1|AAB64095.1| 432|Homo sapiens HPV16 E1 protein binding
protein protein.
Length = 432
Score = 33.1 bits (72), Expect = 0.90
Identities = 15/24 (62%), Positives = 17/24 (70%)
Frame = +2
Query: 326 RAVLLAGQPGTGKTAIAMGLAQAL 397
R VLL G PGTGKT++ LAQ L
Sbjct: 173 RVVLLHGPPGTGKTSLCKALAQKL 196
>CR456744-1|CAG33025.1| 432|Homo sapiens TRIP13 protein.
Length = 432
Score = 33.1 bits (72), Expect = 0.90
Identities = 15/24 (62%), Positives = 17/24 (70%)
Frame = +2
Query: 326 RAVLLAGQPGTGKTAIAMGLAQAL 397
R VLL G PGTGKT++ LAQ L
Sbjct: 173 RVVLLHGPPGTGKTSLCKALAQKL 196
>BC122550-1|AAI22551.1| 475|Homo sapiens VCP protein protein.
Length = 475
Score = 33.1 bits (72), Expect = 0.90
Identities = 18/63 (28%), Positives = 31/63 (49%)
Frame = +2
Query: 296 QMIREGKIAGRAVLLAGQPGTGKTAIAMGLAQALGPDTPFTSMAGSEIFSLEMSKTEALT 475
+ ++ G + VL G PG GKT +A +A F S+ G E+ ++ ++EA
Sbjct: 171 KFLKFGMTPSKGVLFYGPPGCGKTLLAKAIANEC--QANFISIKGPELLTMWFGESEANV 228
Query: 476 QAI 484
+ I
Sbjct: 229 REI 231
>BC121794-1|AAI21795.1| 806|Homo sapiens valosin-containing protein
protein.
Length = 806
Score = 33.1 bits (72), Expect = 0.90
Identities = 20/48 (41%), Positives = 26/48 (54%)
Frame = +2
Query: 326 RAVLLAGQPGTGKTAIAMGLAQALGPDTPFTSMAGSEIFSLEMSKTEA 469
R +LL G PGTGKT IA +A G F + G EI S ++E+
Sbjct: 239 RGILLYGPPGTGKTLIARAVANETG--AFFFLINGPEIMSKLAGESES 284
Score = 33.1 bits (72), Expect = 0.90
Identities = 18/63 (28%), Positives = 31/63 (49%)
Frame = +2
Query: 296 QMIREGKIAGRAVLLAGQPGTGKTAIAMGLAQALGPDTPFTSMAGSEIFSLEMSKTEALT 475
+ ++ G + VL G PG GKT +A +A F S+ G E+ ++ ++EA
Sbjct: 502 KFLKFGMTPSKGVLFYGPPGCGKTLLAKAIANEC--QANFISIKGPELLTMWFGESEANV 559
Query: 476 QAI 484
+ I
Sbjct: 560 REI 562
>BC110913-1|AAI10914.1| 806|Homo sapiens valosin-containing protein
protein.
Length = 806
Score = 33.1 bits (72), Expect = 0.90
Identities = 20/48 (41%), Positives = 26/48 (54%)
Frame = +2
Query: 326 RAVLLAGQPGTGKTAIAMGLAQALGPDTPFTSMAGSEIFSLEMSKTEA 469
R +LL G PGTGKT IA +A G F + G EI S ++E+
Sbjct: 239 RGILLYGPPGTGKTLIARAVANETG--AFFFLINGPEIMSKLAGESES 284
Score = 33.1 bits (72), Expect = 0.90
Identities = 18/63 (28%), Positives = 31/63 (49%)
Frame = +2
Query: 296 QMIREGKIAGRAVLLAGQPGTGKTAIAMGLAQALGPDTPFTSMAGSEIFSLEMSKTEALT 475
+ ++ G + VL G PG GKT +A +A F S+ G E+ ++ ++EA
Sbjct: 502 KFLKFGMTPSKGVLFYGPPGCGKTLLAKAIANEC--QANFISIKGPELLTMWFGESEANV 559
Query: 476 QAI 484
+ I
Sbjct: 560 REI 562
>BC019294-1|AAH19294.1| 432|Homo sapiens thyroid hormone receptor
interactor 13 protein.
Length = 432
Score = 33.1 bits (72), Expect = 0.90
Identities = 15/24 (62%), Positives = 17/24 (70%)
Frame = +2
Query: 326 RAVLLAGQPGTGKTAIAMGLAQAL 397
R VLL G PGTGKT++ LAQ L
Sbjct: 173 RVVLLHGPPGTGKTSLCKALAQKL 196
>BC007562-1|AAH07562.2| 644|Homo sapiens VCP protein protein.
Length = 644
Score = 33.1 bits (72), Expect = 0.90
Identities = 20/48 (41%), Positives = 26/48 (54%)
Frame = +2
Query: 326 RAVLLAGQPGTGKTAIAMGLAQALGPDTPFTSMAGSEIFSLEMSKTEA 469
R +LL G PGTGKT IA +A G F + G EI S ++E+
Sbjct: 77 RGILLYGPPGTGKTLIARAVANETG--AFFFLINGPEIMSKLAGESES 122
Score = 33.1 bits (72), Expect = 0.90
Identities = 18/63 (28%), Positives = 31/63 (49%)
Frame = +2
Query: 296 QMIREGKIAGRAVLLAGQPGTGKTAIAMGLAQALGPDTPFTSMAGSEIFSLEMSKTEALT 475
+ ++ G + VL G PG GKT +A +A F S+ G E+ ++ ++EA
Sbjct: 340 KFLKFGMTPSKGVLFYGPPGCGKTLLAKAIANEC--QANFISIKGPELLTMWFGESEANV 397
Query: 476 QAI 484
+ I
Sbjct: 398 REI 400
>BC000404-1|AAH00404.1| 432|Homo sapiens thyroid hormone receptor
interactor 13 protein.
Length = 432
Score = 33.1 bits (72), Expect = 0.90
Identities = 15/24 (62%), Positives = 17/24 (70%)
Frame = +2
Query: 326 RAVLLAGQPGTGKTAIAMGLAQAL 397
R VLL G PGTGKT++ LAQ L
Sbjct: 173 RVVLLHGPPGTGKTSLCKALAQKL 196
>AL353795-2|CAH70993.1| 806|Homo sapiens valosin-containing protein
protein.
Length = 806
Score = 33.1 bits (72), Expect = 0.90
Identities = 20/48 (41%), Positives = 26/48 (54%)
Frame = +2
Query: 326 RAVLLAGQPGTGKTAIAMGLAQALGPDTPFTSMAGSEIFSLEMSKTEA 469
R +LL G PGTGKT IA +A G F + G EI S ++E+
Sbjct: 239 RGILLYGPPGTGKTLIARAVANETG--AFFFLINGPEIMSKLAGESES 284
Score = 33.1 bits (72), Expect = 0.90
Identities = 18/63 (28%), Positives = 31/63 (49%)
Frame = +2
Query: 296 QMIREGKIAGRAVLLAGQPGTGKTAIAMGLAQALGPDTPFTSMAGSEIFSLEMSKTEALT 475
+ ++ G + VL G PG GKT +A +A F S+ G E+ ++ ++EA
Sbjct: 502 KFLKFGMTPSKGVLFYGPPGCGKTLLAKAIANEC--QANFISIKGPELLTMWFGESEANV 559
Query: 476 QAI 484
+ I
Sbjct: 560 REI 562
>AF313486-1|AAG29874.1| 305|Homo sapiens valosin-containing protein
protein.
Length = 305
Score = 33.1 bits (72), Expect = 0.90
Identities = 18/63 (28%), Positives = 31/63 (49%)
Frame = +2
Query: 296 QMIREGKIAGRAVLLAGQPGTGKTAIAMGLAQALGPDTPFTSMAGSEIFSLEMSKTEALT 475
+ ++ G + VL G PG GKT +A +A F S+ G E+ ++ ++EA
Sbjct: 130 KFLKFGMTPSKGVLFYGPPGCGKTLLAKAIANEC--QANFISIKGPELLTMWFGESEANV 187
Query: 476 QAI 484
+ I
Sbjct: 188 REI 190
>AF313485-1|AAG29873.1| 307|Homo sapiens valosin-containing protein
protein.
Length = 307
Score = 33.1 bits (72), Expect = 0.90
Identities = 20/48 (41%), Positives = 26/48 (54%)
Frame = +2
Query: 326 RAVLLAGQPGTGKTAIAMGLAQALGPDTPFTSMAGSEIFSLEMSKTEA 469
R +LL G PGTGKT IA +A G F + G EI S ++E+
Sbjct: 177 RGILLYGPPGTGKTLIARAVANETG--AFFFLINGPEIMSKLAGESES 222
>AF100752-1|AAD43016.1| 806|Homo sapiens transitional endoplasmic
reticulum ATPase protein.
Length = 806
Score = 33.1 bits (72), Expect = 0.90
Identities = 20/48 (41%), Positives = 26/48 (54%)
Frame = +2
Query: 326 RAVLLAGQPGTGKTAIAMGLAQALGPDTPFTSMAGSEIFSLEMSKTEA 469
R +LL G PGTGKT IA +A G F + G EI S ++E+
Sbjct: 239 RGILLYGPPGTGKTLIARAVANETG--AFFFLINGPEIMSKLAGESES 284
Score = 33.1 bits (72), Expect = 0.90
Identities = 18/63 (28%), Positives = 31/63 (49%)
Frame = +2
Query: 296 QMIREGKIAGRAVLLAGQPGTGKTAIAMGLAQALGPDTPFTSMAGSEIFSLEMSKTEALT 475
+ ++ G + VL G PG GKT +A +A F S+ G E+ ++ ++EA
Sbjct: 502 KFLKFGMTPSKGVLFYGPPGCGKTLLAKAIANEC--QANFISIKGPELLTMWFGESEANV 559
Query: 476 QAI 484
+ I
Sbjct: 560 REI 562
>AC004472-1|AAC07984.1| 806|Homo sapiens TERA_HUMAN protein.
Length = 806
Score = 33.1 bits (72), Expect = 0.90
Identities = 20/48 (41%), Positives = 26/48 (54%)
Frame = +2
Query: 326 RAVLLAGQPGTGKTAIAMGLAQALGPDTPFTSMAGSEIFSLEMSKTEA 469
R +LL G PGTGKT IA +A G F + G EI S ++E+
Sbjct: 239 RGILLYGPPGTGKTLIARAVANETG--AFFFLINGPEIMSKLAGESES 284
Score = 33.1 bits (72), Expect = 0.90
Identities = 18/63 (28%), Positives = 31/63 (49%)
Frame = +2
Query: 296 QMIREGKIAGRAVLLAGQPGTGKTAIAMGLAQALGPDTPFTSMAGSEIFSLEMSKTEALT 475
+ ++ G + VL G PG GKT +A +A F S+ G E+ ++ ++EA
Sbjct: 502 KFLKFGMTPSKGVLFYGPPGCGKTLLAKAIANEC--QANFISIKGPELLTMWFGESEANV 559
Query: 476 QAI 484
+ I
Sbjct: 560 REI 562
>Y18314-1|CAB48398.1| 797|Homo sapiens paraplegin-like protein
protein.
Length = 797
Score = 32.7 bits (71), Expect = 1.2
Identities = 16/41 (39%), Positives = 24/41 (58%)
Frame = +2
Query: 326 RAVLLAGQPGTGKTAIAMGLAQALGPDTPFTSMAGSEIFSL 448
+ +L G PGTGKT +A A A + PF +++GSE +
Sbjct: 342 KGAILTGPPGTGKTLLAK--ATAGEANVPFITVSGSEFLEM 380
>L38810-1|AAC41735.1| 406|Homo sapiens thyroid receptor interactor
protein.
Length = 406
Score = 32.7 bits (71), Expect = 1.2
Identities = 17/38 (44%), Positives = 23/38 (60%)
Frame = +2
Query: 326 RAVLLAGQPGTGKTAIAMGLAQALGPDTPFTSMAGSEI 439
+ VLL G PGTGKT +A +A D F ++GSE+
Sbjct: 184 KGVLLYGPPGTGKTLLARAVAH--HTDCTFIRVSGSEL 219
>D44467-1|BAA07919.1| 406|Homo sapiens 26S proteasome subunit p45
protein.
Length = 406
Score = 32.7 bits (71), Expect = 1.2
Identities = 17/38 (44%), Positives = 23/38 (60%)
Frame = +2
Query: 326 RAVLLAGQPGTGKTAIAMGLAQALGPDTPFTSMAGSEI 439
+ VLL G PGTGKT +A +A D F ++GSE+
Sbjct: 184 KGVLLYGPPGTGKTLLARAVAH--HTDCTFIRVSGSEL 219
>BC065016-1|AAH65016.1| 797|Homo sapiens AFG3 ATPase family gene
3-like 2 (yeast) protein.
Length = 797
Score = 32.7 bits (71), Expect = 1.2
Identities = 16/41 (39%), Positives = 24/41 (58%)
Frame = +2
Query: 326 RAVLLAGQPGTGKTAIAMGLAQALGPDTPFTSMAGSEIFSL 448
+ +L G PGTGKT +A A A + PF +++GSE +
Sbjct: 342 KGAILTGPPGTGKTLLAK--ATAGEANVPFITVSGSEFLEM 380
>BC024282-1|AAH24282.1| 812|Homo sapiens Similar to AFG3 ATPase
family gene 3-like 2 (yeast) protein.
Length = 812
Score = 32.7 bits (71), Expect = 1.2
Identities = 16/41 (39%), Positives = 24/41 (58%)
Frame = +2
Query: 326 RAVLLAGQPGTGKTAIAMGLAQALGPDTPFTSMAGSEIFSL 448
+ +L G PGTGKT +A A A + PF +++GSE +
Sbjct: 357 KGAILTGPPGTGKTLLAK--ATAGEANVPFITVSGSEFLEM 395
>BC018701-1|AAH18701.1| 648|Homo sapiens ATPase family, AAA domain
containing 3B protein.
Length = 648
Score = 32.7 bits (71), Expect = 1.2
Identities = 29/99 (29%), Positives = 43/99 (43%), Gaps = 3/99 (3%)
Frame = +2
Query: 152 VRSITRIERIGAHSHIRGLGLDDSLEPRQVSQGMV-GQKMARKAAGVILQMIREGKIAG- 325
VR +RI + A H + P+ V +G+V + + + + K G
Sbjct: 285 VRETSRITVLEALRHPIQVSRRLLSRPQDVLEGVVLSPSLEARVRDIAIATRNTKKNRGL 344
Query: 326 -RAVLLAGQPGTGKTAIAMGLAQALGPDTPFTSMAGSEI 439
R +LL G PGTGKT A LA G D + M G ++
Sbjct: 345 YRHILLYGPPGTGKTLFAKKLALHSGMD--YAIMTGGDV 381
>BC002542-1|AAH02542.1| 648|Homo sapiens ATPase family, AAA domain
containing 3B protein.
Length = 648
Score = 32.7 bits (71), Expect = 1.2
Identities = 29/99 (29%), Positives = 43/99 (43%), Gaps = 3/99 (3%)
Frame = +2
Query: 152 VRSITRIERIGAHSHIRGLGLDDSLEPRQVSQGMV-GQKMARKAAGVILQMIREGKIAG- 325
VR +RI + A H + P+ V +G+V + + + + K G
Sbjct: 285 VRETSRITVLEALRHPIQVSRRLLSRPQDVLEGVVLSPSLEARVRDIAIATRNTKKNRGL 344
Query: 326 -RAVLLAGQPGTGKTAIAMGLAQALGPDTPFTSMAGSEI 439
R +LL G PGTGKT A LA G D + M G ++
Sbjct: 345 YRHILLYGPPGTGKTLFAKKLALHSGMD--YAIMTGGDV 381
>BC002367-1|AAH02367.3| 406|Homo sapiens proteasome (prosome,
macropain) 26S subunit, ATPase, 5 protein.
Length = 406
Score = 32.7 bits (71), Expect = 1.2
Identities = 17/38 (44%), Positives = 23/38 (60%)
Frame = +2
Query: 326 RAVLLAGQPGTGKTAIAMGLAQALGPDTPFTSMAGSEI 439
+ VLL G PGTGKT +A +A D F ++GSE+
Sbjct: 184 KGVLLYGPPGTGKTLLARAVAH--HTDCTFIRVSGSEL 219
>BC001932-1|AAH01932.1| 406|Homo sapiens proteasome (prosome,
macropain) 26S subunit, ATPase, 5 protein.
Length = 406
Score = 32.7 bits (71), Expect = 1.2
Identities = 17/38 (44%), Positives = 23/38 (60%)
Frame = +2
Query: 326 RAVLLAGQPGTGKTAIAMGLAQALGPDTPFTSMAGSEI 439
+ VLL G PGTGKT +A +A D F ++GSE+
Sbjct: 184 KGVLLYGPPGTGKTLLARAVAH--HTDCTFIRVSGSEL 219
>AL157945-2|CAI22068.1| 648|Homo sapiens ATPase family, AAA domain
containing 3B protein.
Length = 648
Score = 32.7 bits (71), Expect = 1.2
Identities = 29/99 (29%), Positives = 43/99 (43%), Gaps = 3/99 (3%)
Frame = +2
Query: 152 VRSITRIERIGAHSHIRGLGLDDSLEPRQVSQGMV-GQKMARKAAGVILQMIREGKIAG- 325
VR +RI + A H + P+ V +G+V + + + + K G
Sbjct: 285 VRETSRITVLEALRHPIQVSRRLLSRPQDVLEGVVLSPSLEARVRDIAIATRNTKKNRGL 344
Query: 326 -RAVLLAGQPGTGKTAIAMGLAQALGPDTPFTSMAGSEI 439
R +LL G PGTGKT A LA G D + M G ++
Sbjct: 345 YRHILLYGPPGTGKTLFAKKLALHSGMD--YAIMTGGDV 381
>AK024028-1|BAB14787.1| 480|Homo sapiens protein ( Homo sapiens
cDNA FLJ13966 fis, clone Y79AA1001394, weakly similar to
CELL DIVISION PROTEIN FTSH HOMOLOG (EC 3.4.24.-). ).
Length = 480
Score = 32.7 bits (71), Expect = 1.2
Identities = 29/99 (29%), Positives = 43/99 (43%), Gaps = 3/99 (3%)
Frame = +2
Query: 152 VRSITRIERIGAHSHIRGLGLDDSLEPRQVSQGMV-GQKMARKAAGVILQMIREGKIAG- 325
VR +RI + A H + P+ V +G+V + + + + K G
Sbjct: 117 VRETSRITVLEALRHPIQVSRRLLSRPQDVLEGVVLSPSLEARVRDIAIATRNTKKNRGL 176
Query: 326 -RAVLLAGQPGTGKTAIAMGLAQALGPDTPFTSMAGSEI 439
R +LL G PGTGKT A LA G D + M G ++
Sbjct: 177 YRHILLYGPPGTGKTLFAKKLALHSGMD--YAIMTGGDV 213
>AF035309-1|AAB88187.1| 280|Homo sapiens protein ( Homo sapiens
clone 23598 mRNA, complete cds. ).
Length = 280
Score = 32.7 bits (71), Expect = 1.2
Identities = 17/38 (44%), Positives = 23/38 (60%)
Frame = +2
Query: 326 RAVLLAGQPGTGKTAIAMGLAQALGPDTPFTSMAGSEI 439
+ VLL G PGTGKT +A +A D F ++GSE+
Sbjct: 58 KGVLLYGPPGTGKTLLARAVAH--HTDCTFIRVSGSEL 93
>AB209036-1|BAD92273.1| 345|Homo sapiens proteasome 26S ATPase
subunit 5 variant protein.
Length = 345
Score = 32.7 bits (71), Expect = 1.2
Identities = 17/38 (44%), Positives = 23/38 (60%)
Frame = +2
Query: 326 RAVLLAGQPGTGKTAIAMGLAQALGPDTPFTSMAGSEI 439
+ VLL G PGTGKT +A +A D F ++GSE+
Sbjct: 180 KGVLLYGPPGTGKTLLARAVAH--HTDCTFIRVSGSEL 215
>AB033099-1|BAA86587.1| 606|Homo sapiens KIAA1273 protein protein.
Length = 606
Score = 32.7 bits (71), Expect = 1.2
Identities = 29/99 (29%), Positives = 43/99 (43%), Gaps = 3/99 (3%)
Frame = +2
Query: 152 VRSITRIERIGAHSHIRGLGLDDSLEPRQVSQGMV-GQKMARKAAGVILQMIREGKIAG- 325
VR +RI + A H + P+ V +G+V + + + + K G
Sbjct: 243 VRETSRITVLEALRHPIQVSRRLLSRPQDVLEGVVLSPSLEARVRDIAIATRNTKKNRGL 302
Query: 326 -RAVLLAGQPGTGKTAIAMGLAQALGPDTPFTSMAGSEI 439
R +LL G PGTGKT A LA G D + M G ++
Sbjct: 303 YRHILLYGPPGTGKTLFAKKLALHSGMD--YAIMTGGDV 339
>M87338-1|AAB09786.1| 354|Homo sapiens replication factor C, 40-kDa
subunit protein.
Length = 354
Score = 32.3 bits (70), Expect = 1.6
Identities = 17/34 (50%), Positives = 23/34 (67%), Gaps = 1/34 (2%)
Frame = +2
Query: 305 REGKIAGRAVLLAGQPGTGKTAIAMGLAQA-LGP 403
REG + +++AG PGTGKT + LA+A LGP
Sbjct: 65 REGNVPN--IIIAGPPGTGKTTSILCLARALLGP 96
>BC051867-1|AAH51867.1| 674|Homo sapiens fidgetin-like 1 protein.
Length = 674
Score = 32.3 bits (70), Expect = 1.6
Identities = 18/53 (33%), Positives = 29/53 (54%)
Frame = +2
Query: 326 RAVLLAGQPGTGKTAIAMGLAQALGPDTPFTSMAGSEIFSLEMSKTEALTQAI 484
+ +LL G PGTGKT I +A G F S++ S + S + + E + +A+
Sbjct: 435 KGILLFGPPGTGKTLIGKCIASQSG--ATFFSISASSLTSKWVGEGEKMVRAL 485
>BC036104-1|AAH36104.1| 795|Homo sapiens spastic paraplegia 7 (pure
and complicated autosomal recessive) protein.
Length = 795
Score = 32.3 bits (70), Expect = 1.6
Identities = 18/47 (38%), Positives = 25/47 (53%)
Frame = +2
Query: 296 QMIREGKIAGRAVLLAGQPGTGKTAIAMGLAQALGPDTPFTSMAGSE 436
+ ++ G + LL G PG GKT +A A A PF +MAG+E
Sbjct: 333 RFLQLGAKVPKGALLLGPPGCGKTLLAK--AVATEAQVPFLAMAGAE 377
>BC027856-1|AAH27856.1| 674|Homo sapiens FIGNL1 protein protein.
Length = 674
Score = 32.3 bits (70), Expect = 1.6
Identities = 18/53 (33%), Positives = 29/53 (54%)
Frame = +2
Query: 326 RAVLLAGQPGTGKTAIAMGLAQALGPDTPFTSMAGSEIFSLEMSKTEALTQAI 484
+ +LL G PGTGKT I +A G F S++ S + S + + E + +A+
Sbjct: 435 KGILLFGPPGTGKTLIGKCIASQSG--ATFFSISASSLTSKWVGEGEKMVRAL 485
>AK023411-1|BAB14567.1| 254|Homo sapiens protein ( Homo sapiens
cDNA FLJ13349 fis, clone OVARC1002138, moderately
similar to SAP1 PROTEIN. ).
Length = 254
Score = 32.3 bits (70), Expect = 1.6
Identities = 18/53 (33%), Positives = 29/53 (54%)
Frame = +2
Query: 326 RAVLLAGQPGTGKTAIAMGLAQALGPDTPFTSMAGSEIFSLEMSKTEALTQAI 484
+ +LL G PGTGKT I +A G F S++ S + S + + E + +A+
Sbjct: 15 KGILLFGPPGTGKTLIGKCIASQSG--ATFFSISASSLTSKWVGEGEKMVRAL 65
>AK023142-1|BAB14426.1| 674|Homo sapiens protein ( Homo sapiens
cDNA FLJ13080 fis, clone NT2RP3002007, weakly similar to
SAP1 PROTEIN. ).
Length = 674
Score = 32.3 bits (70), Expect = 1.6
Identities = 18/53 (33%), Positives = 29/53 (54%)
Frame = +2
Query: 326 RAVLLAGQPGTGKTAIAMGLAQALGPDTPFTSMAGSEIFSLEMSKTEALTQAI 484
+ +LL G PGTGKT I +A G F S++ S + S + + E + +A+
Sbjct: 435 KGILLFGPPGTGKTLIGKCIASQSG--ATFFSISASSLTSKWVGEGEKMVRAL 485
>AF045555-4|AAC04860.1| 354|Homo sapiens replication factor C
subunit 2 protein.
Length = 354
Score = 32.3 bits (70), Expect = 1.6
Identities = 17/34 (50%), Positives = 23/34 (67%), Gaps = 1/34 (2%)
Frame = +2
Query: 305 REGKIAGRAVLLAGQPGTGKTAIAMGLAQA-LGP 403
REG + +++AG PGTGKT + LA+A LGP
Sbjct: 65 REGNVPN--IIIAGPPGTGKTTSILCLARALLGP 96
>AC018705-1|AAS01996.1| 674|Homo sapiens unknown protein.
Length = 674
Score = 32.3 bits (70), Expect = 1.6
Identities = 18/53 (33%), Positives = 29/53 (54%)
Frame = +2
Query: 326 RAVLLAGQPGTGKTAIAMGLAQALGPDTPFTSMAGSEIFSLEMSKTEALTQAI 484
+ +LL G PGTGKT I +A G F S++ S + S + + E + +A+
Sbjct: 435 KGILLFGPPGTGKTLIGKCIASQSG--ATFFSISASSLTSKWVGEGEKMVRAL 485
>AC005081-1|AAP22334.1| 354|Homo sapiens unknown protein.
Length = 354
Score = 32.3 bits (70), Expect = 1.6
Identities = 17/34 (50%), Positives = 23/34 (67%), Gaps = 1/34 (2%)
Frame = +2
Query: 305 REGKIAGRAVLLAGQPGTGKTAIAMGLAQA-LGP 403
REG + +++AG PGTGKT + LA+A LGP
Sbjct: 65 REGNVPN--IIIAGPPGTGKTTSILCLARALLGP 96
>D78275-1|BAA11338.1| 389|Homo sapiens proteasome subunit p42
protein.
Length = 389
Score = 31.9 bits (69), Expect = 2.1
Identities = 19/45 (42%), Positives = 23/45 (51%)
Frame = +2
Query: 305 REGKIAGRAVLLAGQPGTGKTAIAMGLAQALGPDTPFTSMAGSEI 439
R G I + LL G PGTGKT +A +A L D F + S I
Sbjct: 161 RVGIIPPKGCLLYGPPGTGKTLLARAVASQL--DCNFLKVVSSSI 203
>CR456709-1|CAG32990.1| 389|Homo sapiens PSMC6 protein.
Length = 389
Score = 31.9 bits (69), Expect = 2.1
Identities = 19/45 (42%), Positives = 23/45 (51%)
Frame = +2
Query: 305 REGKIAGRAVLLAGQPGTGKTAIAMGLAQALGPDTPFTSMAGSEI 439
R G I + LL G PGTGKT +A +A L D F + S I
Sbjct: 161 RVGIIPPKGCLLYGPPGTGKTLLARAVASQL--DCNFLKVVSSSI 203
>BT006843-1|AAP35489.1| 389|Homo sapiens proteasome (prosome,
macropain) 26S subunit, ATPase, 6 protein.
Length = 389
Score = 31.9 bits (69), Expect = 2.1
Identities = 19/45 (42%), Positives = 23/45 (51%)
Frame = +2
Query: 305 REGKIAGRAVLLAGQPGTGKTAIAMGLAQALGPDTPFTSMAGSEI 439
R G I + LL G PGTGKT +A +A L D F + S I
Sbjct: 161 RVGIIPPKGCLLYGPPGTGKTLLARAVASQL--DCNFLKVVSSSI 203
>BC150260-1|AAI50261.1| 584|Homo sapiens spastin protein.
Length = 584
Score = 31.9 bits (69), Expect = 2.1
Identities = 26/85 (30%), Positives = 43/85 (50%), Gaps = 7/85 (8%)
Frame = +2
Query: 251 MVGQKMARKAAG--VILQMIREGKIAG-----RAVLLAGQPGTGKTAIAMGLAQALGPDT 409
+ GQ +A++A VIL +R G R +LL G PG GKT +A A A +
Sbjct: 312 IAGQDLAKQALQEIVILPSLRPELFTGLRAPARGLLLFGPPGNGKTMLAK--AVAAESNA 369
Query: 410 PFTSMAGSEIFSLEMSKTEALTQAI 484
F +++ + + S + + E L +A+
Sbjct: 370 TFFNISAASLTSKYVGEGEKLVRAL 394
>BC005390-1|AAH05390.1| 389|Homo sapiens proteasome (prosome,
macropain) 26S subunit, ATPase, 6 protein.
Length = 389
Score = 31.9 bits (69), Expect = 2.1
Identities = 19/45 (42%), Positives = 23/45 (51%)
Frame = +2
Query: 305 REGKIAGRAVLLAGQPGTGKTAIAMGLAQALGPDTPFTSMAGSEI 439
R G I + LL G PGTGKT +A +A L D F + S I
Sbjct: 161 RVGIIPPKGCLLYGPPGTGKTLLARAVASQL--DCNFLKVVSSSI 203
>AK022348-1|BAB14017.1| 392|Homo sapiens protein ( Homo sapiens
cDNA FLJ12286 fis, clone MAMMA1001768, weakly similar to
CELL DIVISION CYCLE PROTEIN 48 HOMOLOG MJ1156. ).
Length = 392
Score = 31.9 bits (69), Expect = 2.1
Identities = 14/32 (43%), Positives = 18/32 (56%)
Frame = +2
Query: 311 GKIAGRAVLLAGQPGTGKTAIAMGLAQALGPD 406
G R VLLAG PG GKT + +A+ G +
Sbjct: 230 GLAVPRGVLLAGPPGVGKTQLVQAVARGAGAE 261
>AJ246003-1|CAB60208.1| 616|Homo sapiens spastin protein protein.
Length = 616
Score = 31.9 bits (69), Expect = 2.1
Identities = 26/85 (30%), Positives = 43/85 (50%), Gaps = 7/85 (8%)
Frame = +2
Query: 251 MVGQKMARKAAG--VILQMIREGKIAG-----RAVLLAGQPGTGKTAIAMGLAQALGPDT 409
+ GQ +A++A VIL +R G R +LL G PG GKT +A A A +
Sbjct: 344 IAGQDLAKQALQEIVILPSLRPELFTGLRAPARGLLLFGPPGNGKTMLAK--AVAAESNA 401
Query: 410 PFTSMAGSEIFSLEMSKTEALTQAI 484
F +++ + + S + + E L +A+
Sbjct: 402 TFFNISAASLTSKYVGEGEKLVRAL 426
>AJ246001-1|CAB60141.1| 616|Homo sapiens spastin protein protein.
Length = 616
Score = 31.9 bits (69), Expect = 2.1
Identities = 26/85 (30%), Positives = 43/85 (50%), Gaps = 7/85 (8%)
Frame = +2
Query: 251 MVGQKMARKAAG--VILQMIREGKIAG-----RAVLLAGQPGTGKTAIAMGLAQALGPDT 409
+ GQ +A++A VIL +R G R +LL G PG GKT +A A A +
Sbjct: 344 IAGQDLAKQALQEIVILPSLRPELFTGLRAPARGLLLFGPPGNGKTMLAK--AVAAESNA 401
Query: 410 PFTSMAGSEIFSLEMSKTEALTQAI 484
F +++ + + S + + E L +A+
Sbjct: 402 TFFNISAASLTSKYVGEGEKLVRAL 426
>AF132747-1|AAL75948.1| 437|Homo sapiens SKD2 protein protein.
Length = 437
Score = 31.9 bits (69), Expect = 2.1
Identities = 17/52 (32%), Positives = 30/52 (57%)
Frame = +2
Query: 323 GRAVLLAGQPGTGKTAIAMGLAQALGPDTPFTSMAGSEIFSLEMSKTEALTQ 478
G LL G PGTGK+ +A +A ++ F S++ S++ S + ++E L +
Sbjct: 160 GGGYLLFGPPGTGKSYLAKAVATE-ATNSTFFSVSSSDLMSKWLGESEKLVK 210
>AF006305-1|AAB61616.1| 389|Homo sapiens 26S proteasome regulatory
subunit protein.
Length = 389
Score = 31.9 bits (69), Expect = 2.1
Identities = 19/45 (42%), Positives = 23/45 (51%)
Frame = +2
Query: 305 REGKIAGRAVLLAGQPGTGKTAIAMGLAQALGPDTPFTSMAGSEI 439
R G I + LL G PGTGKT +A +A L D F + S I
Sbjct: 161 RVGIIPPKGCLLYGPPGTGKTLLARAVASQL--DCNFLKVVSSSI 203
>AB029006-1|BAA83035.1| 584|Homo sapiens KIAA1083 protein protein.
Length = 584
Score = 31.9 bits (69), Expect = 2.1
Identities = 26/85 (30%), Positives = 43/85 (50%), Gaps = 7/85 (8%)
Frame = +2
Query: 251 MVGQKMARKAAG--VILQMIREGKIAG-----RAVLLAGQPGTGKTAIAMGLAQALGPDT 409
+ GQ +A++A VIL +R G R +LL G PG GKT +A A A +
Sbjct: 312 IAGQDLAKQALQEIVILPSLRPELFTGLRAPARGLLLFGPPGNGKTMLAK--AVAAESNA 369
Query: 410 PFTSMAGSEIFSLEMSKTEALTQAI 484
F +++ + + S + + E L +A+
Sbjct: 370 TFFNISAASLTSKYVGEGEKLVRAL 394
>Y16610-1|CAA76314.1| 795|Homo sapiens paraplegin protein.
Length = 795
Score = 31.5 bits (68), Expect = 2.7
Identities = 18/47 (38%), Positives = 24/47 (51%)
Frame = +2
Query: 296 QMIREGKIAGRAVLLAGQPGTGKTAIAMGLAQALGPDTPFTSMAGSE 436
+ ++ G + LL G PG GKT +A A A PF +MAG E
Sbjct: 333 RFLQLGAKVPKGALLLGPPGCGKTLLAK--AVATEAQVPFLAMAGPE 377
>BX276089-2|CAI16431.1| 491|Homo sapiens katanin p60
(ATPase-containing) subunit A 1 protein.
Length = 491
Score = 31.5 bits (68), Expect = 2.7
Identities = 17/53 (32%), Positives = 29/53 (54%)
Frame = +2
Query: 326 RAVLLAGQPGTGKTAIAMGLAQALGPDTPFTSMAGSEIFSLEMSKTEALTQAI 484
+ VL+ G PGTGKT +A +A T F +++ S + S ++E L + +
Sbjct: 243 KGVLMVGPPGTGKTLLAKAVATEC--KTTFFNVSSSTLTSKYRGESEKLVRLL 293
>BX276089-1|CAI16432.1| 311|Homo sapiens katanin p60
(ATPase-containing) subunit A 1 protein.
Length = 311
Score = 31.5 bits (68), Expect = 2.7
Identities = 17/53 (32%), Positives = 29/53 (54%)
Frame = +2
Query: 326 RAVLLAGQPGTGKTAIAMGLAQALGPDTPFTSMAGSEIFSLEMSKTEALTQAI 484
+ VL+ G PGTGKT +A +A T F +++ S + S ++E L + +
Sbjct: 167 KGVLMVGPPGTGKTLLAKAVATEC--KTTFFNVSSSTLTSKYRGESEKLVRLL 217
>BC050428-1|AAH50428.1| 311|Homo sapiens KATNA1 protein protein.
Length = 311
Score = 31.5 bits (68), Expect = 2.7
Identities = 17/53 (32%), Positives = 29/53 (54%)
Frame = +2
Query: 326 RAVLLAGQPGTGKTAIAMGLAQALGPDTPFTSMAGSEIFSLEMSKTEALTQAI 484
+ VL+ G PGTGKT +A +A T F +++ S + S ++E L + +
Sbjct: 167 KGVLMVGPPGTGKTLLAKAVATEC--KTTFFNVSSSTLTSKYRGESEKLVRLL 217
>BC035929-1|AAH35929.1| 732|Homo sapiens SPG7 protein protein.
Length = 732
Score = 31.5 bits (68), Expect = 2.7
Identities = 18/47 (38%), Positives = 24/47 (51%)
Frame = +2
Query: 296 QMIREGKIAGRAVLLAGQPGTGKTAIAMGLAQALGPDTPFTSMAGSE 436
+ ++ G + LL G PG GKT +A A A PF +MAG E
Sbjct: 270 RFLQLGAKVPKGALLLGPPGCGKTLLAK--AVATEAQVPFLAMAGPE 314
>AL078581-2|CAI19505.1| 491|Homo sapiens katanin p60
(ATPase-containing) subunit A 1 protein.
Length = 491
Score = 31.5 bits (68), Expect = 2.7
Identities = 17/53 (32%), Positives = 29/53 (54%)
Frame = +2
Query: 326 RAVLLAGQPGTGKTAIAMGLAQALGPDTPFTSMAGSEIFSLEMSKTEALTQAI 484
+ VL+ G PGTGKT +A +A T F +++ S + S ++E L + +
Sbjct: 243 KGVLMVGPPGTGKTLLAKAVATEC--KTTFFNVSSSTLTSKYRGESEKLVRLL 293
>AL078581-1|CAI19504.1| 311|Homo sapiens katanin p60
(ATPase-containing) subunit A 1 protein.
Length = 311
Score = 31.5 bits (68), Expect = 2.7
Identities = 17/53 (32%), Positives = 29/53 (54%)
Frame = +2
Query: 326 RAVLLAGQPGTGKTAIAMGLAQALGPDTPFTSMAGSEIFSLEMSKTEALTQAI 484
+ VL+ G PGTGKT +A +A T F +++ S + S ++E L + +
Sbjct: 167 KGVLMVGPPGTGKTLLAKAVATEC--KTTFFNVSSSTLTSKYRGESEKLVRLL 217
>AF080525-1|AAD28099.1| 795|Homo sapiens paraplegin protein.
Length = 795
Score = 31.5 bits (68), Expect = 2.7
Identities = 18/47 (38%), Positives = 24/47 (51%)
Frame = +2
Query: 296 QMIREGKIAGRAVLLAGQPGTGKTAIAMGLAQALGPDTPFTSMAGSE 436
+ ++ G + LL G PG GKT +A A A PF +MAG E
Sbjct: 333 RFLQLGAKVPKGALLLGPPGCGKTLLAK--AVATEAQVPFLAMAGPE 377
>AF056022-1|AAC25114.1| 491|Homo sapiens p60 katanin protein.
Length = 491
Score = 31.5 bits (68), Expect = 2.7
Identities = 17/53 (32%), Positives = 29/53 (54%)
Frame = +2
Query: 326 RAVLLAGQPGTGKTAIAMGLAQALGPDTPFTSMAGSEIFSLEMSKTEALTQAI 484
+ VL+ G PGTGKT +A +A T F +++ S + S ++E L + +
Sbjct: 243 KGVLMVGPPGTGKTLLAKAVATEC--KTTFFNVSSSTLTSKYRGESEKLVRLL 293
>U56602-1|AAC50655.1| 980|Homo sapiens Pxaaa1p protein.
Length = 980
Score = 31.1 bits (67), Expect = 3.6
Identities = 16/45 (35%), Positives = 26/45 (57%)
Frame = +2
Query: 332 VLLAGQPGTGKTAIAMGLAQALGPDTPFTSMAGSEIFSLEMSKTE 466
+LL G PGTGKT +A +A F S+ G E+ ++ + ++E
Sbjct: 740 LLLHGPPGTGKTLLAKAVATEC--SLTFLSVKGPELINMYVGQSE 782
>L07540-1|AAB09784.1| 340|Homo sapiens replication factor C, 36-kDa
subunit protein.
Length = 340
Score = 31.1 bits (67), Expect = 3.6
Identities = 15/31 (48%), Positives = 19/31 (61%)
Frame = +2
Query: 332 VLLAGQPGTGKTAIAMGLAQALGPDTPFTSM 424
+LL G PGTGKT+ + A+ L D F SM
Sbjct: 56 LLLYGPPGTGKTSTILACAKQLYKDKEFGSM 86
>D83703-1|BAA12069.1| 980|Homo sapiens peroxisome assembly factor-2
protein.
Length = 980
Score = 31.1 bits (67), Expect = 3.6
Identities = 16/45 (35%), Positives = 26/45 (57%)
Frame = +2
Query: 332 VLLAGQPGTGKTAIAMGLAQALGPDTPFTSMAGSEIFSLEMSKTE 466
+LL G PGTGKT +A +A F S+ G E+ ++ + ++E
Sbjct: 740 LLLHGPPGTGKTLLAKAVATEC--SLTFLSVKGPELINMYVGQSE 782
>CR407651-1|CAG28579.1| 340|Homo sapiens RFC5 protein.
Length = 340
Score = 31.1 bits (67), Expect = 3.6
Identities = 15/31 (48%), Positives = 19/31 (61%)
Frame = +2
Query: 332 VLLAGQPGTGKTAIAMGLAQALGPDTPFTSM 424
+LL G PGTGKT+ + A+ L D F SM
Sbjct: 56 LLLYGPPGTGKTSTILACAKQLYKDKEFGSM 86
>BC048331-1|AAH48331.1| 980|Homo sapiens peroxisomal biogenesis
factor 6 protein.
Length = 980
Score = 31.1 bits (67), Expect = 3.6
Identities = 16/45 (35%), Positives = 26/45 (57%)
Frame = +2
Query: 332 VLLAGQPGTGKTAIAMGLAQALGPDTPFTSMAGSEIFSLEMSKTE 466
+LL G PGTGKT +A +A F S+ G E+ ++ + ++E
Sbjct: 740 LLLHGPPGTGKTLLAKAVATEC--SLTFLSVKGPELINMYVGQSE 782
>BC013961-1|AAH13961.1| 340|Homo sapiens replication factor C
(activator 1) 5, 36.5kDa protein.
Length = 340
Score = 31.1 bits (67), Expect = 3.6
Identities = 15/31 (48%), Positives = 19/31 (61%)
Frame = +2
Query: 332 VLLAGQPGTGKTAIAMGLAQALGPDTPFTSM 424
+LL G PGTGKT+ + A+ L D F SM
Sbjct: 56 LLLYGPPGTGKTSTILACAKQLYKDKEFGSM 86
>BC001866-1|AAH01866.1| 340|Homo sapiens replication factor C
(activator 1) 5, 36.5kDa protein.
Length = 340
Score = 31.1 bits (67), Expect = 3.6
Identities = 15/31 (48%), Positives = 19/31 (61%)
Frame = +2
Query: 332 VLLAGQPGTGKTAIAMGLAQALGPDTPFTSM 424
+LL G PGTGKT+ + A+ L D F SM
Sbjct: 56 LLLYGPPGTGKTSTILACAKQLYKDKEFGSM 86
>AY254323-1|AAO63493.1| 340|Homo sapiens replication factor C
(activator 1) 5, 36.5kDa protein.
Length = 340
Score = 31.1 bits (67), Expect = 3.6
Identities = 15/31 (48%), Positives = 19/31 (61%)
Frame = +2
Query: 332 VLLAGQPGTGKTAIAMGLAQALGPDTPFTSM 424
+LL G PGTGKT+ + A+ L D F SM
Sbjct: 56 LLLYGPPGTGKTSTILACAKQLYKDKEFGSM 86
>AL158815-3|CAI19463.1| 980|Homo sapiens peroxisomal biogenesis
factor 6 protein.
Length = 980
Score = 31.1 bits (67), Expect = 3.6
Identities = 16/45 (35%), Positives = 26/45 (57%)
Frame = +2
Query: 332 VLLAGQPGTGKTAIAMGLAQALGPDTPFTSMAGSEIFSLEMSKTE 466
+LL G PGTGKT +A +A F S+ G E+ ++ + ++E
Sbjct: 740 LLLHGPPGTGKTLLAKAVATEC--SLTFLSVKGPELINMYVGQSE 782
>AF108098-1|AAF62564.1| 980|Homo sapiens peroxisome assembly
factor-2 protein.
Length = 980
Score = 31.1 bits (67), Expect = 3.6
Identities = 16/45 (35%), Positives = 26/45 (57%)
Frame = +2
Query: 332 VLLAGQPGTGKTAIAMGLAQALGPDTPFTSMAGSEIFSLEMSKTE 466
+LL G PGTGKT +A +A F S+ G E+ ++ + ++E
Sbjct: 740 LLLHGPPGTGKTLLAKAVATEC--SLTFLSVKGPELINMYVGQSE 782
>AB208992-1|BAD92229.1| 351|Homo sapiens replication factor C 5
isoform 1 variant protein.
Length = 351
Score = 31.1 bits (67), Expect = 3.6
Identities = 15/31 (48%), Positives = 19/31 (61%)
Frame = +2
Query: 332 VLLAGQPGTGKTAIAMGLAQALGPDTPFTSM 424
+LL G PGTGKT+ + A+ L D F SM
Sbjct: 70 LLLYGPPGTGKTSTILACAKQLYKDKEFGSM 100
>AB051077-1|BAB83047.1| 892|Homo sapiens peroxin Pex6p protein.
Length = 892
Score = 31.1 bits (67), Expect = 3.6
Identities = 16/45 (35%), Positives = 26/45 (57%)
Frame = +2
Query: 332 VLLAGQPGTGKTAIAMGLAQALGPDTPFTSMAGSEIFSLEMSKTE 466
+LL G PGTGKT +A +A F S+ G E+ ++ + ++E
Sbjct: 652 LLLHGPPGTGKTLLAKAVATEC--SLTFLSVKGPELINMYVGQSE 694
>AB051076-1|BAB83046.1| 980|Homo sapiens peroxine Pex6p protein.
Length = 980
Score = 31.1 bits (67), Expect = 3.6
Identities = 16/45 (35%), Positives = 26/45 (57%)
Frame = +2
Query: 332 VLLAGQPGTGKTAIAMGLAQALGPDTPFTSMAGSEIFSLEMSKTE 466
+LL G PGTGKT +A +A F S+ G E+ ++ + ++E
Sbjct: 740 LLLHGPPGTGKTLLAKAVATEC--SLTFLSVKGPELINMYVGQSE 782
>AB020696-1|BAA74912.2| 535|Homo sapiens KIAA0889 protein protein.
Length = 535
Score = 31.1 bits (67), Expect = 3.6
Identities = 11/30 (36%), Positives = 19/30 (63%)
Frame = -1
Query: 240 TCLGSKESSKPSPLMWECAPILSMRVIERT 151
TCLG K+ + + MW+ AP S++ + +T
Sbjct: 4 TCLGEKKKKENADRMWDWAPTTSLQEVNKT 33
>X76040-1|CAA53625.1| 937|Homo sapiens Lon protease-like protein
protein.
Length = 937
Score = 30.7 bits (66), Expect = 4.8
Identities = 13/29 (44%), Positives = 18/29 (62%)
Frame = +2
Query: 311 GKIAGRAVLLAGQPGTGKTAIAMGLAQAL 397
G G+ + G PG GKT+IA +A+AL
Sbjct: 490 GSTQGKILCFYGPPGVGKTSIARSIARAL 518
>X74215-1|CAA52291.1| 845|Homo sapiens Lon protease-like protein
protein.
Length = 845
Score = 30.7 bits (66), Expect = 4.8
Identities = 13/29 (44%), Positives = 18/29 (62%)
Frame = +2
Query: 311 GKIAGRAVLLAGQPGTGKTAIAMGLAQAL 397
G G+ + G PG GKT+IA +A+AL
Sbjct: 398 GSTQGKILCFYGPPGVGKTSIARSIARAL 426
>U02389-1|AAA61616.1| 962|Homo sapiens hLON ATP-dependent protease
protein.
Length = 962
Score = 30.7 bits (66), Expect = 4.8
Identities = 13/29 (44%), Positives = 18/29 (62%)
Frame = +2
Query: 311 GKIAGRAVLLAGQPGTGKTAIAMGLAQAL 397
G G+ + G PG GKT+IA +A+AL
Sbjct: 515 GSTQGKILCFYGPPGVGKTSIARSIARAL 543
>D11094-1|BAA01868.1| 433|Homo sapiens mammalian suppressor of sgv1
protein.
Length = 433
Score = 30.7 bits (66), Expect = 4.8
Identities = 17/38 (44%), Positives = 21/38 (55%)
Frame = +2
Query: 326 RAVLLAGQPGTGKTAIAMGLAQALGPDTPFTSMAGSEI 439
+ VLL G PGTGKT A +A D F + GSE+
Sbjct: 210 KGVLLFGPPGTGKTLCARAVANR--TDACFIRVIGSEL 245
>BC109218-1|AAI09219.1| 848|Homo sapiens LONP1 protein protein.
Length = 848
Score = 30.7 bits (66), Expect = 4.8
Identities = 13/29 (44%), Positives = 18/29 (62%)
Frame = +2
Query: 311 GKIAGRAVLLAGQPGTGKTAIAMGLAQAL 397
G G+ + G PG GKT+IA +A+AL
Sbjct: 401 GSTQGKILCFYGPPGVGKTSIARSIARAL 429
>BC034999-1|AAH34999.2| 466|Homo sapiens katanin p60 subunit A-like
2 protein.
Length = 466
Score = 30.7 bits (66), Expect = 4.8
Identities = 18/53 (33%), Positives = 28/53 (52%)
Frame = +2
Query: 326 RAVLLAGQPGTGKTAIAMGLAQALGPDTPFTSMAGSEIFSLEMSKTEALTQAI 484
+ +LL G PGTGKT +A +A T F +++ S I S +E L + +
Sbjct: 216 KGLLLYGPPGTGKTLLAKAVATEC--KTTFFNISASTIVSKWRGDSEKLVRVL 266
>BC021245-1|AAH21245.2| 122|Homo sapiens AFG3L1 protein protein.
Length = 122
Score = 30.7 bits (66), Expect = 4.8
Identities = 16/41 (39%), Positives = 22/41 (53%)
Frame = +2
Query: 326 RAVLLAGQPGTGKTAIAMGLAQALGPDTPFTSMAGSEIFSL 448
+ +L G PGTGKT +A A A PF ++ GSE +
Sbjct: 22 KGAMLTGPPGTGKTLLAK--ATAGEATVPFITVNGSEFLEM 60
>BC004934-1|AAH04934.1| 517|Homo sapiens Unknown (protein for
IMAGE:3606377) protein.
Length = 517
Score = 30.7 bits (66), Expect = 4.8
Identities = 13/29 (44%), Positives = 18/29 (62%)
Frame = +2
Query: 311 GKIAGRAVLLAGQPGTGKTAIAMGLAQAL 397
G G+ + G PG GKT+IA +A+AL
Sbjct: 70 GSTQGKILCFYGPPGVGKTSIARSIARAL 98
>BC002589-1|AAH02589.1| 433|Homo sapiens proteasome (prosome,
macropain) 26S subunit, ATPase, 2 protein.
Length = 433
Score = 30.7 bits (66), Expect = 4.8
Identities = 17/38 (44%), Positives = 21/38 (55%)
Frame = +2
Query: 326 RAVLLAGQPGTGKTAIAMGLAQALGPDTPFTSMAGSEI 439
+ VLL G PGTGKT A +A D F + GSE+
Sbjct: 210 KGVLLFGPPGTGKTLCARAVANR--TDACFIRVIGSEL 245
>BC000235-1|AAH00235.1| 959|Homo sapiens lon peptidase 1,
mitochondrial protein.
Length = 959
Score = 30.7 bits (66), Expect = 4.8
Identities = 13/29 (44%), Positives = 18/29 (62%)
Frame = +2
Query: 311 GKIAGRAVLLAGQPGTGKTAIAMGLAQAL 397
G G+ + G PG GKT+IA +A+AL
Sbjct: 512 GSTQGKILCFYGPPGVGKTSIARSIARAL 540
>AL583839-8|CAO03351.1| 1772|Homo sapiens WNK lysine deficient protein
kinase 2 protein.
Length = 1772
Score = 30.7 bits (66), Expect = 4.8
Identities = 19/56 (33%), Positives = 25/56 (44%)
Frame = -1
Query: 360 PVPG*PANNTARPAILPSRIICKMTPAAFLAIFWPTMPCDTCLGSKESSKPSPLMW 193
P PG P + T P P+ + TP L+ PT PC LG P+P+ W
Sbjct: 1678 PAPG-PLSTTVIPGAAPTLSV--PTPGTALSNL-PTPPCALPLGQYRGLLPAPVSW 1729
>AL390760-4|CAO03648.1| 1772|Homo sapiens WNK lysine deficient protein
kinase 2 protein.
Length = 1772
Score = 30.7 bits (66), Expect = 4.8
Identities = 19/56 (33%), Positives = 25/56 (44%)
Frame = -1
Query: 360 PVPG*PANNTARPAILPSRIICKMTPAAFLAIFWPTMPCDTCLGSKESSKPSPLMW 193
P PG P + T P P+ + TP L+ PT PC LG P+P+ W
Sbjct: 1678 PAPG-PLSTTVIPGAAPTLSV--PTPGTALSNL-PTPPCALPLGQYRGLLPAPVSW 1729
>AL354991-4|CAO03640.1| 1772|Homo sapiens WNK lysine deficient protein
kinase 2 protein.
Length = 1772
Score = 30.7 bits (66), Expect = 4.8
Identities = 19/56 (33%), Positives = 25/56 (44%)
Frame = -1
Query: 360 PVPG*PANNTARPAILPSRIICKMTPAAFLAIFWPTMPCDTCLGSKESSKPSPLMW 193
P PG P + T P P+ + TP L+ PT PC LG P+P+ W
Sbjct: 1678 PAPG-PLSTTVIPGAAPTLSV--PTPGTALSNL-PTPPCALPLGQYRGLLPAPVSW 1729
>AK096626-1|BAC04829.1| 895|Homo sapiens protein ( Homo sapiens
cDNA FLJ39307 fis, clone OCBBF2013208, highly similar to
MITOCHONDRIAL LON PROTEASE PRECURSOR (EC 3.4.21.-). ).
Length = 895
Score = 30.7 bits (66), Expect = 4.8
Identities = 13/29 (44%), Positives = 18/29 (62%)
Frame = +2
Query: 311 GKIAGRAVLLAGQPGTGKTAIAMGLAQAL 397
G G+ + G PG GKT+IA +A+AL
Sbjct: 448 GSTQGKILCFYGPPGVGKTSIARSIARAL 476
>AF059309-1|AAD24414.1| 959|Homo sapiens LON protease protein.
Length = 959
Score = 30.7 bits (66), Expect = 4.8
Identities = 13/29 (44%), Positives = 18/29 (62%)
Frame = +2
Query: 311 GKIAGRAVLLAGQPGTGKTAIAMGLAQAL 397
G G+ + G PG GKT+IA +A+AL
Sbjct: 512 GSTQGKILCFYGPPGVGKTSIARSIARAL 540
>AC093701-1|AAS07429.1| 409|Homo sapiens unknown protein.
Length = 409
Score = 30.7 bits (66), Expect = 4.8
Identities = 17/38 (44%), Positives = 21/38 (55%)
Frame = +2
Query: 326 RAVLLAGQPGTGKTAIAMGLAQALGPDTPFTSMAGSEI 439
+ VLL G PGTGKT A +A D F + GSE+
Sbjct: 186 KGVLLFGPPGTGKTLCARAVANR--TDACFIRVIGSEL 221
>AB075520-1|BAE45763.1| 433|Homo sapiens putative protein product
of Nbla10058 protein.
Length = 433
Score = 30.7 bits (66), Expect = 4.8
Identities = 17/38 (44%), Positives = 21/38 (55%)
Frame = +2
Query: 326 RAVLLAGQPGTGKTAIAMGLAQALGPDTPFTSMAGSEI 439
+ VLL G PGTGKT A +A D F + GSE+
Sbjct: 210 KGVLLFGPPGTGKTLCARAVANR--TDACFIRVIGSEL 245
>U03985-1|AAA17411.1| 751|Homo sapiens protein ( Human
N-ethylmaleimide-sensitive factor mRNA, partial cds. ).
Length = 751
Score = 30.3 bits (65), Expect = 6.3
Identities = 18/53 (33%), Positives = 28/53 (52%)
Frame = +2
Query: 311 GKIAGRAVLLAGQPGTGKTAIAMGLAQALGPDTPFTSMAGSEIFSLEMSKTEA 469
G I + +LL G PG GKT +A + + L P + G EI + + ++EA
Sbjct: 256 GCIHVKGILLYGPPGCGKTLLARQIGKMLNAREP-KVVNGPEILNKYVGESEA 307
>BC065299-1|AAH65299.1| 271|Homo sapiens signal recognition
particle receptor, B subunit protein.
Length = 271
Score = 30.3 bits (65), Expect = 6.3
Identities = 18/63 (28%), Positives = 32/63 (50%)
Frame = +2
Query: 287 VILQMIREGKIAGRAVLLAGQPGTGKTAIAMGLAQALGPDTPFTSMAGSEIFSLEMSKTE 466
V ++IR + + RAVLL G +GKT + + L L DT + ++ + ++
Sbjct: 52 VFWKLIRSRRSSQRAVLLVGLCDSGKTLLFVRLLTGLYRDTQTSITDSCAVYRVNNNRGN 111
Query: 467 ALT 475
+LT
Sbjct: 112 SLT 114
>BC063607-1|AAH63607.1| 586|Homo sapiens ATAD3A protein protein.
Length = 586
Score = 30.3 bits (65), Expect = 6.3
Identities = 16/38 (42%), Positives = 21/38 (55%)
Frame = +2
Query: 326 RAVLLAGQPGTGKTAIAMGLAQALGPDTPFTSMAGSEI 439
R +L+ G PGTGKT A LA G D + M G ++
Sbjct: 346 RNILMYGPPGTGKTLFAKKLALHSGMD--YAIMTGGDV 381
>BC063001-1|AAH63001.1| 271|Homo sapiens signal recognition
particle receptor, B subunit protein.
Length = 271
Score = 30.3 bits (65), Expect = 6.3
Identities = 18/63 (28%), Positives = 32/63 (50%)
Frame = +2
Query: 287 VILQMIREGKIAGRAVLLAGQPGTGKTAIAMGLAQALGPDTPFTSMAGSEIFSLEMSKTE 466
V ++IR + + RAVLL G +GKT + + L L DT + ++ + ++
Sbjct: 52 VFWKLIRSRRSSQRAVLLVGLCDSGKTLLFVRLLTGLYRDTQTSITDSCAVYRVNNNRGN 111
Query: 467 ALT 475
+LT
Sbjct: 112 SLT 114
>BC033109-1|AAH33109.1| 586|Homo sapiens ATAD3A protein protein.
Length = 586
Score = 30.3 bits (65), Expect = 6.3
Identities = 16/38 (42%), Positives = 21/38 (55%)
Frame = +2
Query: 326 RAVLLAGQPGTGKTAIAMGLAQALGPDTPFTSMAGSEI 439
R +L+ G PGTGKT A LA G D + M G ++
Sbjct: 346 RNILMYGPPGTGKTLFAKKLALHSGMD--YAIMTGGDV 381
>BC018184-1|AAH18184.1| 975|Homo sapiens CTF18, chromosome
transmission fidelity factor 18 homolog (S. cerevisiae)
protein.
Length = 975
Score = 30.3 bits (65), Expect = 6.3
Identities = 28/93 (30%), Positives = 43/93 (46%), Gaps = 7/93 (7%)
Frame = +2
Query: 221 SLEPRQVSQGMVGQKMARKAAGVILQMIREG-----KIAGRAVLLAGQPGTGKTAIAMGL 385
S+EP +VS+ + V+ +M+ G + + LL G PG GKT +A +
Sbjct: 328 SVEPARVSKEATAPGKWKSHEQVLEEMLEAGLDPSQRPKQKVALLCGPPGLGKTTLAHVI 387
Query: 386 AQALGPDTPFTSMAGSEIFSLEMSKT--EALTQ 478
A+ G M S+ S E+ +T EA TQ
Sbjct: 388 ARHAGYSV--VEMNASDDRSPEVFRTRIEAATQ 418
>BC014101-1|AAH14101.1| 586|Homo sapiens ATAD3A protein protein.
Length = 586
Score = 30.3 bits (65), Expect = 6.3
Identities = 16/38 (42%), Positives = 21/38 (55%)
Frame = +2
Query: 326 RAVLLAGQPGTGKTAIAMGLAQALGPDTPFTSMAGSEI 439
R +L+ G PGTGKT A LA G D + M G ++
Sbjct: 346 RNILMYGPPGTGKTLFAKKLALHSGMD--YAIMTGGDV 381
>BC011814-1|AAH11814.1| 586|Homo sapiens ATAD3A protein protein.
Length = 586
Score = 30.3 bits (65), Expect = 6.3
Identities = 16/38 (42%), Positives = 21/38 (55%)
Frame = +2
Query: 326 RAVLLAGQPGTGKTAIAMGLAQALGPDTPFTSMAGSEI 439
R +L+ G PGTGKT A LA G D + M G ++
Sbjct: 346 RNILMYGPPGTGKTLFAKKLALHSGMD--YAIMTGGDV 381
>BC007803-1|AAH07803.1| 586|Homo sapiens ATAD3A protein protein.
Length = 586
Score = 30.3 bits (65), Expect = 6.3
Identities = 16/38 (42%), Positives = 21/38 (55%)
Frame = +2
Query: 326 RAVLLAGQPGTGKTAIAMGLAQALGPDTPFTSMAGSEI 439
R +L+ G PGTGKT A LA G D + M G ++
Sbjct: 346 RNILMYGPPGTGKTLFAKKLALHSGMD--YAIMTGGDV 381
>BC006437-1|AAH06437.1| 1016|Homo sapiens CHTF18 protein protein.
Length = 1016
Score = 30.3 bits (65), Expect = 6.3
Identities = 28/93 (30%), Positives = 43/93 (46%), Gaps = 7/93 (7%)
Frame = +2
Query: 221 SLEPRQVSQGMVGQKMARKAAGVILQMIREG-----KIAGRAVLLAGQPGTGKTAIAMGL 385
S+EP +VS+ + V+ +M+ G + + LL G PG GKT +A +
Sbjct: 369 SVEPARVSKEATAPGKWKSHEQVLEEMLEAGLDPSQRPKQKVALLCGPPGLGKTTLAHVI 428
Query: 386 AQALGPDTPFTSMAGSEIFSLEMSKT--EALTQ 478
A+ G M S+ S E+ +T EA TQ
Sbjct: 429 ARHAGYSV--VEMNASDDRSPEVFRTRIEAATQ 459
>BC006278-1|AAH06278.2| 975|Homo sapiens CTF18, chromosome
transmission fidelity factor 18 homolog (S. cerevisiae)
protein.
Length = 975
Score = 30.3 bits (65), Expect = 6.3
Identities = 28/93 (30%), Positives = 43/93 (46%), Gaps = 7/93 (7%)
Frame = +2
Query: 221 SLEPRQVSQGMVGQKMARKAAGVILQMIREG-----KIAGRAVLLAGQPGTGKTAIAMGL 385
S+EP +VS+ + V+ +M+ G + + LL G PG GKT +A +
Sbjct: 328 SVEPARVSKEATAPGKWKSHEQVLEEMLEAGLDPSQRPKQKVALLCGPPGLGKTTLAHVI 387
Query: 386 AQALGPDTPFTSMAGSEIFSLEMSKT--EALTQ 478
A+ G M S+ S E+ +T EA TQ
Sbjct: 388 ARHAGYSV--VEMNASDDRSPEVFRTRIEAATQ 418
>AL645728-11|CAI22954.1| 634|Homo sapiens ATPase family, AAA domain
containing 3A protein.
Length = 634
Score = 30.3 bits (65), Expect = 6.3
Identities = 16/38 (42%), Positives = 21/38 (55%)
Frame = +2
Query: 326 RAVLLAGQPGTGKTAIAMGLAQALGPDTPFTSMAGSEI 439
R +L+ G PGTGKT A LA G D + M G ++
Sbjct: 394 RNILMYGPPGTGKTLFAKKLALHSGMD--YAIMTGGDV 429
>AL645728-10|CAI22955.1| 586|Homo sapiens ATPase family, AAA domain
containing 3A protein.
Length = 586
Score = 30.3 bits (65), Expect = 6.3
Identities = 16/38 (42%), Positives = 21/38 (55%)
Frame = +2
Query: 326 RAVLLAGQPGTGKTAIAMGLAQALGPDTPFTSMAGSEI 439
R +L+ G PGTGKT A LA G D + M G ++
Sbjct: 346 RNILMYGPPGTGKTLFAKKLALHSGMD--YAIMTGGDV 381
>AL645728-9|CAI22953.1| 571|Homo sapiens ATPase family, AAA domain
containing 3A protein.
Length = 571
Score = 30.3 bits (65), Expect = 6.3
Identities = 16/38 (42%), Positives = 21/38 (55%)
Frame = +2
Query: 326 RAVLLAGQPGTGKTAIAMGLAQALGPDTPFTSMAGSEI 439
R +L+ G PGTGKT A LA G D + M G ++
Sbjct: 331 RNILMYGPPGTGKTLFAKKLALHSGMD--YAIMTGGDV 366
>AL353692-3|CAI16236.1| 5596|Homo sapiens MDN1, midasin homolog
(yeast) protein.
Length = 5596
Score = 30.3 bits (65), Expect = 6.3
Identities = 15/44 (34%), Positives = 23/44 (52%)
Frame = +2
Query: 269 ARKAAGVILQMIREGKIAGRAVLLAGQPGTGKTAIAMGLAQALG 400
A + + V+++ + G VLL G+ GTGKT+ LA G
Sbjct: 652 ATRPSSVLIEQLAVCVSKGEPVLLVGETGTGKTSTIQYLAHITG 695
Score = 30.3 bits (65), Expect = 6.3
Identities = 14/35 (40%), Positives = 23/35 (65%)
Frame = +2
Query: 296 QMIREGKIAGRAVLLAGQPGTGKTAIAMGLAQALG 400
+++R K+ + +LL G PG GKT++ LA+A G
Sbjct: 1738 RLLRATKLK-KPILLEGSPGVGKTSLVGALAKASG 1771
>AL353692-2|CAI16235.1| 1181|Homo sapiens MDN1, midasin homolog
(yeast) protein.
Length = 1181
Score = 30.3 bits (65), Expect = 6.3
Identities = 15/44 (34%), Positives = 23/44 (52%)
Frame = +2
Query: 269 ARKAAGVILQMIREGKIAGRAVLLAGQPGTGKTAIAMGLAQALG 400
A + + V+++ + G VLL G+ GTGKT+ LA G
Sbjct: 579 ATRPSSVLIEQLAVCVSKGEPVLLVGETGTGKTSTIQYLAHITG 622
>AL158813-2|CAI13203.1| 5596|Homo sapiens MDN1, midasin homolog
(yeast) protein.
Length = 5596
Score = 30.3 bits (65), Expect = 6.3
Identities = 15/44 (34%), Positives = 23/44 (52%)
Frame = +2
Query: 269 ARKAAGVILQMIREGKIAGRAVLLAGQPGTGKTAIAMGLAQALG 400
A + + V+++ + G VLL G+ GTGKT+ LA G
Sbjct: 652 ATRPSSVLIEQLAVCVSKGEPVLLVGETGTGKTSTIQYLAHITG 695
Score = 30.3 bits (65), Expect = 6.3
Identities = 14/35 (40%), Positives = 23/35 (65%)
Frame = +2
Query: 296 QMIREGKIAGRAVLLAGQPGTGKTAIAMGLAQALG 400
+++R K+ + +LL G PG GKT++ LA+A G
Sbjct: 1738 RLLRATKLK-KPILLEGSPGVGKTSLVGALAKASG 1771
>AL158813-1|CAI13202.1| 1181|Homo sapiens MDN1, midasin homolog
(yeast) protein.
Length = 1181
Score = 30.3 bits (65), Expect = 6.3
Identities = 15/44 (34%), Positives = 23/44 (52%)
Frame = +2
Query: 269 ARKAAGVILQMIREGKIAGRAVLLAGQPGTGKTAIAMGLAQALG 400
A + + V+++ + G VLL G+ GTGKT+ LA G
Sbjct: 579 ATRPSSVLIEQLAVCVSKGEPVLLVGETGTGKTSTIQYLAHITG 622
>AL096678-1|CAI42279.1| 5596|Homo sapiens MDN1, midasin homolog
(yeast) protein.
Length = 5596
Score = 30.3 bits (65), Expect = 6.3
Identities = 15/44 (34%), Positives = 23/44 (52%)
Frame = +2
Query: 269 ARKAAGVILQMIREGKIAGRAVLLAGQPGTGKTAIAMGLAQALG 400
A + + V+++ + G VLL G+ GTGKT+ LA G
Sbjct: 652 ATRPSSVLIEQLAVCVSKGEPVLLVGETGTGKTSTIQYLAHITG 695
Score = 30.3 bits (65), Expect = 6.3
Identities = 14/35 (40%), Positives = 23/35 (65%)
Frame = +2
Query: 296 QMIREGKIAGRAVLLAGQPGTGKTAIAMGLAQALG 400
+++R K+ + +LL G PG GKT++ LA+A G
Sbjct: 1738 RLLRATKLK-KPILLEGSPGVGKTSLVGALAKASG 1771
>AL031033-2|CAB53056.1| 260|Homo sapiens protein ( Human DNA
sequence from clone LA16c-321D2 on chromosome 16
Contains a gene for a Ribosomal Large Subunit
Pseudouridine Synthase (EC ).
Length = 260
Score = 30.3 bits (65), Expect = 6.3
Identities = 28/93 (30%), Positives = 43/93 (46%), Gaps = 7/93 (7%)
Frame = +2
Query: 221 SLEPRQVSQGMVGQKMARKAAGVILQMIREG-----KIAGRAVLLAGQPGTGKTAIAMGL 385
S+EP +VS+ + V+ +M+ G + + LL G PG GKT +A +
Sbjct: 50 SVEPARVSKEATAPGKWKSHEQVLEEMLEAGLDPSQRPKQKVALLCGPPGLGKTTLAHVI 109
Query: 386 AQALGPDTPFTSMAGSEIFSLEMSKT--EALTQ 478
A+ G M S+ S E+ +T EA TQ
Sbjct: 110 ARHAGYSV--VEMNASDDRSPEVFRTRIEAATQ 140
>AK127496-1|BAC87007.1| 1375|Homo sapiens protein ( Homo sapiens
cDNA FLJ45589 fis, clone BRTHA3014547, weakly similar
to Ankyrin 1. ).
Length = 1375
Score = 30.3 bits (65), Expect = 6.3
Identities = 17/40 (42%), Positives = 22/40 (55%)
Frame = +2
Query: 311 GKIAGRAVLLAGQPGTGKTAIAMGLAQALGPDTPFTSMAG 430
GK A VLL G PG+GKTA+ + L P +P + G
Sbjct: 12 GKGAAWGVLLVGGPGSGKTALC---TELLWPSSPASLQRG 48
>AK097044-1|BAC04933.1| 199|Homo sapiens protein ( Homo sapiens
cDNA FLJ39725 fis, clone SMINT2015294, highly similar to
Mus musculus ATP-dependent zinc metalloprotease (Afg3l1)
mRNA. ).
Length = 199
Score = 30.3 bits (65), Expect = 6.3
Identities = 16/43 (37%), Positives = 22/43 (51%)
Frame = +2
Query: 320 AGRAVLLAGQPGTGKTAIAMGLAQALGPDTPFTSMAGSEIFSL 448
+ +L G PGTGKT +A A A PF ++ GSE +
Sbjct: 97 SSEGAMLTGPPGTGKTLLAK--ATAGEATVPFITVNGSEFLEM 137
>AK091144-1|BAC03595.1| 634|Homo sapiens protein ( Homo sapiens
cDNA FLJ33825 fis, clone CTONG2003375, moderately
similar to Drosophila melanogaster AAA family protein
Bor (bor) mRNA. ).
Length = 634
Score = 30.3 bits (65), Expect = 6.3
Identities = 16/38 (42%), Positives = 21/38 (55%)
Frame = +2
Query: 326 RAVLLAGQPGTGKTAIAMGLAQALGPDTPFTSMAGSEI 439
R +L+ G PGTGKT A LA G D + M G ++
Sbjct: 394 RNILMYGPPGTGKTLFAKKLALHSGMD--YAIMTGGDV 429
>AK075531-1|BAC11675.1| 271|Homo sapiens protein ( Homo sapiens
cDNA PSEC0230 fis, clone HEMBA1006391, highly similar to
SIGNAL RECOGNITION PARTICLE RECEPTOR BETA SUBUNIT. ).
Length = 271
Score = 30.3 bits (65), Expect = 6.3
Identities = 18/63 (28%), Positives = 32/63 (50%)
Frame = +2
Query: 287 VILQMIREGKIAGRAVLLAGQPGTGKTAIAMGLAQALGPDTPFTSMAGSEIFSLEMSKTE 466
V ++IR + + RAVLL G +GKT + + L L DT + ++ + ++
Sbjct: 52 VFWKLIRSRRSSQRAVLLVGLCDSGKTLLFVRLLTGLYRDTQTSITDSCAVYRVNNNRGN 111
Query: 467 ALT 475
+LT
Sbjct: 112 SLT 114
>AK027525-1|BAB55176.1| 271|Homo sapiens protein ( Homo sapiens
cDNA FLJ14619 fis, clone NT2RP1001569, highly similar to
SIGNAL RECOGNITION PARTICLE RECEPTOR BETA SUBUNIT. ).
Length = 271
Score = 30.3 bits (65), Expect = 6.3
Identities = 18/63 (28%), Positives = 32/63 (50%)
Frame = +2
Query: 287 VILQMIREGKIAGRAVLLAGQPGTGKTAIAMGLAQALGPDTPFTSMAGSEIFSLEMSKTE 466
V ++IR + + RAVLL G +GKT + + L L DT + ++ + ++
Sbjct: 52 VFWKLIRSRRSSQRAVLLVGLCDSGKTLLFVRLLTGLYRDTQTSITDSCAVYRVNNNRGN 111
Query: 467 ALT 475
+LT
Sbjct: 112 SLT 114
>AK001571-1|BAA91764.1| 586|Homo sapiens protein ( Homo sapiens
cDNA FLJ10709 fis, clone NT2RP3000869. ).
Length = 586
Score = 30.3 bits (65), Expect = 6.3
Identities = 16/38 (42%), Positives = 21/38 (55%)
Frame = +2
Query: 326 RAVLLAGQPGTGKTAIAMGLAQALGPDTPFTSMAGSEI 439
R +L+ G PGTGKT A LA G D + M G ++
Sbjct: 346 RNILMYGPPGTGKTLFAKKLALHSGMD--YAIMTGGDV 381
>AF503925-1|AAM77722.1| 5596|Homo sapiens midasin protein.
Length = 5596
Score = 30.3 bits (65), Expect = 6.3
Identities = 15/44 (34%), Positives = 23/44 (52%)
Frame = +2
Query: 269 ARKAAGVILQMIREGKIAGRAVLLAGQPGTGKTAIAMGLAQALG 400
A + + V+++ + G VLL G+ GTGKT+ LA G
Sbjct: 652 ATRPSSVLIEQLAVCVSKGEPVLLVGETGTGKTSTIQYLAHITG 695
Score = 30.3 bits (65), Expect = 6.3
Identities = 14/35 (40%), Positives = 23/35 (65%)
Frame = +2
Query: 296 QMIREGKIAGRAVLLAGQPGTGKTAIAMGLAQALG 400
+++R K+ + +LL G PG GKT++ LA+A G
Sbjct: 1738 RLLRATKLK-KPILLEGSPGVGKTSLVGALAKASG 1771
>AF194815-1|AAF20673.1| 115|Homo sapiens immunoglobulin lambda
light chain variable region protein.
Length = 115
Score = 30.3 bits (65), Expect = 6.3
Identities = 17/38 (44%), Positives = 18/38 (47%)
Frame = -3
Query: 382 SHSDGSLPCTRLTGQ*HCSSRYLTFSNHL*DDSGGLPC 269
SHS G R G + RYLTFSN DD G C
Sbjct: 55 SHSKGDGIPDRFMGSSSGADRYLTFSNLQSDDEAGYHC 92
>AF141882-1|AAD34888.3| 271|Homo sapiens APMCF1 protein.
Length = 271
Score = 30.3 bits (65), Expect = 6.3
Identities = 18/63 (28%), Positives = 32/63 (50%)
Frame = +2
Query: 287 VILQMIREGKIAGRAVLLAGQPGTGKTAIAMGLAQALGPDTPFTSMAGSEIFSLEMSKTE 466
V ++IR + + RAVLL G +GKT + + L L DT + ++ + ++
Sbjct: 52 VFWKLIRSRRSSQRAVLLVGLCDSGKTLLFVRLLTGLYRDTQTSITDSCAVYRVNNNRGN 111
Query: 467 ALT 475
+LT
Sbjct: 112 SLT 114
>AF135168-1|AAF70545.1| 744|Homo sapiens N-ethylmaleimide-sensitive
factor protein.
Length = 744
Score = 30.3 bits (65), Expect = 6.3
Identities = 18/53 (33%), Positives = 28/53 (52%)
Frame = +2
Query: 311 GKIAGRAVLLAGQPGTGKTAIAMGLAQALGPDTPFTSMAGSEIFSLEMSKTEA 469
G I + +LL G PG GKT +A + + L P + G EI + + ++EA
Sbjct: 249 GCIHVKGILLYGPPGCGKTLLARQIGKMLNAREP-KVVNGPEILNKYVGESEA 300
>AF102846-1|AAF04745.2| 744|Homo sapiens N-ethylmaleimide-sensitive
factor protein.
Length = 744
Score = 30.3 bits (65), Expect = 6.3
Identities = 18/53 (33%), Positives = 28/53 (52%)
Frame = +2
Query: 311 GKIAGRAVLLAGQPGTGKTAIAMGLAQALGPDTPFTSMAGSEIFSLEMSKTEA 469
G I + +LL G PG GKT +A + + L P + G EI + + ++EA
Sbjct: 249 GCIHVKGILLYGPPGCGKTLLARQIGKMLNAREP-KVVNGPEILNKYVGESEA 300
>AF086914-1|AAP97144.1| 271|Homo sapiens signal recognition
particle receptor beta subunit protein.
Length = 271
Score = 30.3 bits (65), Expect = 6.3
Identities = 18/63 (28%), Positives = 32/63 (50%)
Frame = +2
Query: 287 VILQMIREGKIAGRAVLLAGQPGTGKTAIAMGLAQALGPDTPFTSMAGSEIFSLEMSKTE 466
V ++IR + + RAVLL G +GKT + + L L DT + ++ + ++
Sbjct: 52 VFWKLIRSRRSSQRAVLLVGLCDSGKTLLFVRLLTGLYRDTQTSITDSCAVYRVNNNRGN 111
Query: 467 ALT 475
+LT
Sbjct: 112 SLT 114
>AE006465-2|AAK61256.1| 1184|Homo sapiens some homology with
holliday junction DNA helicase RUVB like protein.
Length = 1184
Score = 30.3 bits (65), Expect = 6.3
Identities = 28/93 (30%), Positives = 43/93 (46%), Gaps = 7/93 (7%)
Frame = +2
Query: 221 SLEPRQVSQGMVGQKMARKAAGVILQMIREG-----KIAGRAVLLAGQPGTGKTAIAMGL 385
S+EP +VS+ + V+ +M+ G + + LL G PG GKT +A +
Sbjct: 523 SVEPARVSKEATAPGKWKSHEQVLEEMLEAGLDPSQRPKQKVALLCGPPGLGKTTLAHVI 582
Query: 386 AQALGPDTPFTSMAGSEIFSLEMSKT--EALTQ 478
A+ G M S+ S E+ +T EA TQ
Sbjct: 583 ARHAGYSV--VEMNASDDRSPEVFRTRIEAATQ 613
>L02426-1|AAA35484.1| 440|Homo sapiens 26S protease (S4) regulatory
subunit protein.
Length = 440
Score = 29.9 bits (64), Expect = 8.3
Identities = 15/38 (39%), Positives = 21/38 (55%)
Frame = +2
Query: 326 RAVLLAGQPGTGKTAIAMGLAQALGPDTPFTSMAGSEI 439
+ V+L G PGTGKT +A +A F + GSE+
Sbjct: 220 KGVILYGPPGTGKTLLAKAVANQ--TSATFLRVVGSEL 255
>CR457044-1|CAG33325.1| 440|Homo sapiens PSMC1 protein.
Length = 440
Score = 29.9 bits (64), Expect = 8.3
Identities = 15/38 (39%), Positives = 21/38 (55%)
Frame = +2
Query: 326 RAVLLAGQPGTGKTAIAMGLAQALGPDTPFTSMAGSEI 439
+ V+L G PGTGKT +A +A F + GSE+
Sbjct: 220 KGVILYGPPGTGKTLLAKAVANQ--TSATFLRVVGSEL 255
>BT009826-1|AAP88828.1| 440|Homo sapiens proteasome (prosome,
macropain) 26S subunit, ATPase, 1 protein.
Length = 440
Score = 29.9 bits (64), Expect = 8.3
Identities = 15/38 (39%), Positives = 21/38 (55%)
Frame = +2
Query: 326 RAVLLAGQPGTGKTAIAMGLAQALGPDTPFTSMAGSEI 439
+ V+L G PGTGKT +A +A F + GSE+
Sbjct: 220 KGVILYGPPGTGKTLLAKAVANQ--TSATFLRVVGSEL 255
>BC073818-1|AAH73818.1| 440|Homo sapiens proteasome (prosome,
macropain) 26S subunit, ATPase, 1 protein.
Length = 440
Score = 29.9 bits (64), Expect = 8.3
Identities = 15/38 (39%), Positives = 21/38 (55%)
Frame = +2
Query: 326 RAVLLAGQPGTGKTAIAMGLAQALGPDTPFTSMAGSEI 439
+ V+L G PGTGKT +A +A F + GSE+
Sbjct: 220 KGVILYGPPGTGKTLLAKAVANQ--TSATFLRVVGSEL 255
>BC067741-1|AAH67741.1| 440|Homo sapiens proteasome (prosome,
macropain) 26S subunit, ATPase, 1 protein.
Length = 440
Score = 29.9 bits (64), Expect = 8.3
Identities = 15/38 (39%), Positives = 21/38 (55%)
Frame = +2
Query: 326 RAVLLAGQPGTGKTAIAMGLAQALGPDTPFTSMAGSEI 439
+ V+L G PGTGKT +A +A F + GSE+
Sbjct: 220 KGVILYGPPGTGKTLLAKAVANQ--TSATFLRVVGSEL 255
>BC035575-1|AAH35575.1| 1283|Homo sapiens peroxisome biogenesis factor
1 protein.
Length = 1283
Score = 29.9 bits (64), Expect = 8.3
Identities = 20/52 (38%), Positives = 30/52 (57%)
Frame = +2
Query: 332 VLLAGQPGTGKTAIAMGLAQALGPDTPFTSMAGSEIFSLEMSKTEALTQAIR 487
+LL G PGTGKT +A +A+ + F S+ G E+ S + +E QA+R
Sbjct: 877 ILLYGPPGTGKTLLAGVIARESRMN--FISVKGPELLSKYIGASE---QAVR 923
>BC016368-1|AAH16368.1| 440|Homo sapiens proteasome (prosome,
macropain) 26S subunit, ATPase, 1 protein.
Length = 440
Score = 29.9 bits (64), Expect = 8.3
Identities = 15/38 (39%), Positives = 21/38 (55%)
Frame = +2
Query: 326 RAVLLAGQPGTGKTAIAMGLAQALGPDTPFTSMAGSEI 439
+ V+L G PGTGKT +A +A F + GSE+
Sbjct: 220 KGVILYGPPGTGKTLLAKAVANQ--TSATFLRVVGSEL 255
>BC000512-1|AAH00512.1| 440|Homo sapiens proteasome (prosome,
macropain) 26S subunit, ATPase, 1 protein.
Length = 440
Score = 29.9 bits (64), Expect = 8.3
Identities = 15/38 (39%), Positives = 21/38 (55%)
Frame = +2
Query: 326 RAVLLAGQPGTGKTAIAMGLAQALGPDTPFTSMAGSEI 439
+ V+L G PGTGKT +A +A F + GSE+
Sbjct: 220 KGVILYGPPGTGKTLLAKAVANQ--TSATFLRVVGSEL 255
>AY045575-1|AAK92217.1| 4624|Homo sapiens axonemal dynein heavy chain
DNAH5 protein.
Length = 4624
Score = 29.9 bits (64), Expect = 8.3
Identities = 13/28 (46%), Positives = 16/28 (57%)
Frame = +2
Query: 323 GRAVLLAGQPGTGKTAIAMGLAQALGPD 406
G+AVLL G+ GT KT I G P+
Sbjct: 2583 GKAVLLIGEQGTAKTVIIKGFMSKYDPE 2610
>AK222668-1|BAD96388.1| 440|Homo sapiens proteasome 26S ATPase
subunit 1 variant protein.
Length = 440
Score = 29.9 bits (64), Expect = 8.3
Identities = 15/38 (39%), Positives = 21/38 (55%)
Frame = +2
Query: 326 RAVLLAGQPGTGKTAIAMGLAQALGPDTPFTSMAGSEI 439
+ V+L G PGTGKT +A +A F + GSE+
Sbjct: 220 KGVILYGPPGTGKTLLAKAVANQ--TSATFLRVVGSEL 255
>AF030356-1|AAB99758.1| 1283|Homo sapiens peroxisome biogenesis gene 1
protein.
Length = 1283
Score = 29.9 bits (64), Expect = 8.3
Identities = 20/52 (38%), Positives = 30/52 (57%)
Frame = +2
Query: 332 VLLAGQPGTGKTAIAMGLAQALGPDTPFTSMAGSEIFSLEMSKTEALTQAIR 487
+LL G PGTGKT +A +A+ + F S+ G E+ S + +E QA+R
Sbjct: 877 ILLYGPPGTGKTLLAGVIARESRMN--FISVKGPELLSKYIGASE---QAVR 923
>AF026086-1|AAB87880.1| 1283|Homo sapiens peroxisome biogenesis
disorder protein 1 protein.
Length = 1283
Score = 29.9 bits (64), Expect = 8.3
Identities = 20/52 (38%), Positives = 30/52 (57%)
Frame = +2
Query: 332 VLLAGQPGTGKTAIAMGLAQALGPDTPFTSMAGSEIFSLEMSKTEALTQAIR 487
+LL G PGTGKT +A +A+ + F S+ G E+ S + +E QA+R
Sbjct: 877 ILLYGPPGTGKTLLAGVIARESRMN--FISVKGPELLSKYIGASE---QAVR 923
>AC000064-1|AAB46346.1| 541|Homo sapiens WUGSC:H_RG083M05.1
protein.
Length = 541
Score = 29.9 bits (64), Expect = 8.3
Identities = 20/52 (38%), Positives = 30/52 (57%)
Frame = +2
Query: 332 VLLAGQPGTGKTAIAMGLAQALGPDTPFTSMAGSEIFSLEMSKTEALTQAIR 487
+LL G PGTGKT +A +A+ + F S+ G E+ S + +E QA+R
Sbjct: 190 ILLYGPPGTGKTLLAGVIARESRMN--FISVKGPELLSKYIGASE---QAVR 236
>AB209424-1|BAD92661.1| 294|Homo sapiens Putative GTP-binding
protein RAY-like variant protein.
Length = 294
Score = 29.9 bits (64), Expect = 8.3
Identities = 20/55 (36%), Positives = 28/55 (50%), Gaps = 6/55 (10%)
Frame = +2
Query: 230 PRQVSQGMVGQKMARKAAGVILQMIREG------KIAGRAVLLAGQPGTGKTAIA 376
P Q S G +A AA ++L + G K+A + +L AG P GKTA+A
Sbjct: 108 PSQASPGPEAHPLASLAAALVLWVRLAGVLVTMVKLAAKCIL-AGDPAVGKTALA 161
>AB052092-1|BAB59063.1| 1283|Homo sapiens Pex1pG843D protein.
Length = 1283
Score = 29.9 bits (64), Expect = 8.3
Identities = 20/52 (38%), Positives = 30/52 (57%)
Frame = +2
Query: 332 VLLAGQPGTGKTAIAMGLAQALGPDTPFTSMAGSEIFSLEMSKTEALTQAIR 487
+LL G PGTGKT +A +A+ + F S+ G E+ S + +E QA+R
Sbjct: 877 ILLYGPPGTGKTLLAGVIARESRMN--FISVKGPELLSKYIGASE---QAVR 923
>AB052091-1|BAB59062.1| 1283|Homo sapiens Pex1pL664P protein.
Length = 1283
Score = 29.9 bits (64), Expect = 8.3
Identities = 20/52 (38%), Positives = 30/52 (57%)
Frame = +2
Query: 332 VLLAGQPGTGKTAIAMGLAQALGPDTPFTSMAGSEIFSLEMSKTEALTQAIR 487
+LL G PGTGKT +A +A+ + F S+ G E+ S + +E QA+R
Sbjct: 877 ILLYGPPGTGKTLLAGVIARESRMN--FISVKGPELLSKYIGASE---QAVR 923
>AB052090-1|BAB59061.1| 1226|Homo sapiens Pex1p-634del690 protein.
Length = 1226
Score = 29.9 bits (64), Expect = 8.3
Identities = 20/52 (38%), Positives = 30/52 (57%)
Frame = +2
Query: 332 VLLAGQPGTGKTAIAMGLAQALGPDTPFTSMAGSEIFSLEMSKTEALTQAIR 487
+LL G PGTGKT +A +A+ + F S+ G E+ S + +E QA+R
Sbjct: 820 ILLYGPPGTGKTLLAGVIARESRMN--FISVKGPELLSKYIGASE---QAVR 866
>AB008112-1|BAA85162.1| 1283|Homo sapiens PEX1 protein.
Length = 1283
Score = 29.9 bits (64), Expect = 8.3
Identities = 20/52 (38%), Positives = 30/52 (57%)
Frame = +2
Query: 332 VLLAGQPGTGKTAIAMGLAQALGPDTPFTSMAGSEIFSLEMSKTEALTQAIR 487
+LL G PGTGKT +A +A+ + F S+ G E+ S + +E QA+R
Sbjct: 877 ILLYGPPGTGKTLLAGVIARESRMN--FISVKGPELLSKYIGASE---QAVR 923
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 85,464,766
Number of Sequences: 237096
Number of extensions: 1678146
Number of successful extensions: 4473
Number of sequences better than 10.0: 198
Number of HSP's better than 10.0 without gapping: 4223
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4463
length of database: 76,859,062
effective HSP length: 87
effective length of database: 56,231,710
effective search space used: 7366354010
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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