Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmmt25c07
         (197 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

X17469-1|CAA35503.1|  140|Homo sapiens c-myb protein (140 AA) pr...    28   6.4  
U22376-1|AAB49035.1|  761|Homo sapiens c-myb protein.                  28   6.4  
AL023693-4|CAI20200.1|  690|Homo sapiens v-myb myeloblastosis vi...    28   6.4  
AJ616791-6|CAF04482.1|  761|Homo sapiens protein ( .  ).).             28   6.4  
AJ606319-1|CAE55170.1|  761|Homo sapiens v-myb myeloblastosis vi...    28   6.4  

>X17469-1|CAA35503.1|  140|Homo sapiens c-myb protein (140 AA)
           protein.
          Length = 140

 Score = 27.9 bits (59), Expect = 6.4
 Identities = 17/36 (47%), Positives = 23/36 (63%)
 Frame = +3

Query: 90  RINLFSLNLPSSIE*YQNLPPAEHSYNELPILRKKK 197
           R+N   L+  SS++  + LPPA HS   L ILRKK+
Sbjct: 53  RVNKRMLS-ESSLDPPKVLPPARHSTIPLVILRKKR 87


>U22376-1|AAB49035.1|  761|Homo sapiens c-myb protein.
          Length = 761

 Score = 27.9 bits (59), Expect = 6.4
 Identities = 17/36 (47%), Positives = 23/36 (63%)
 Frame = +3

Query: 90  RINLFSLNLPSSIE*YQNLPPAEHSYNELPILRKKK 197
           R+N   L+  SS++  + LPPA HS   L ILRKK+
Sbjct: 450 RVNKRMLS-ESSLDPPKVLPPARHSTIPLVILRKKR 484


>AL023693-4|CAI20200.1|  690|Homo sapiens v-myb myeloblastosis viral
           oncogene homolog (avian) protein.
          Length = 690

 Score = 27.9 bits (59), Expect = 6.4
 Identities = 17/36 (47%), Positives = 23/36 (63%)
 Frame = +3

Query: 90  RINLFSLNLPSSIE*YQNLPPAEHSYNELPILRKKK 197
           R+N   L+  SS++  + LPPA HS   L ILRKK+
Sbjct: 379 RVNKRMLS-ESSLDPPKVLPPARHSTIPLVILRKKR 413


>AJ616791-6|CAF04482.1|  761|Homo sapiens protein ( .  ).).
          Length = 761

 Score = 27.9 bits (59), Expect = 6.4
 Identities = 17/36 (47%), Positives = 23/36 (63%)
 Frame = +3

Query: 90  RINLFSLNLPSSIE*YQNLPPAEHSYNELPILRKKK 197
           R+N   L+  SS++  + LPPA HS   L ILRKK+
Sbjct: 450 RVNKRMLS-ESSLDPPKVLPPARHSTIPLVILRKKR 484


>AJ606319-1|CAE55170.1|  761|Homo sapiens v-myb myeloblastosis viral
           oncogene homologue (avian) protein.
          Length = 761

 Score = 27.9 bits (59), Expect = 6.4
 Identities = 17/36 (47%), Positives = 23/36 (63%)
 Frame = +3

Query: 90  RINLFSLNLPSSIE*YQNLPPAEHSYNELPILRKKK 197
           R+N   L+  SS++  + LPPA HS   L ILRKK+
Sbjct: 450 RVNKRMLS-ESSLDPPKVLPPARHSTIPLVILRKKR 484


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,766,785
Number of Sequences: 237096
Number of extensions: 216913
Number of successful extensions: 292
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 280
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 292
length of database: 76,859,062
effective HSP length: 44
effective length of database: 66,426,838
effective search space used: 1394963598
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)