Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmmt25c07
         (197 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ849455-1|CAH60991.1|  366|Apis mellifera twist protein protein.      21   1.1  
DQ011228-1|AAY63897.1|  486|Apis mellifera Amt-2-like protein pr...    20   2.4  
DQ013068-1|AAY81956.1|  931|Apis mellifera dusty protein kinase ...    20   3.2  
DQ013067-1|AAY81955.1|  969|Apis mellifera dusty protein kinase ...    20   3.2  
EF625898-1|ABR45905.1|  686|Apis mellifera hexamerin protein.          19   4.3  
EF589162-1|ABQ84439.1|  686|Apis mellifera hexamerin 70c protein.      19   4.3  
EF625899-1|ABR45906.1| 1010|Apis mellifera high Glx storage prot...    19   5.7  
AM050259-1|CAJ18340.1|  683|Apis mellifera putative H3K9 methylt...    19   5.7  
DQ257416-1|ABB81847.1|  552|Apis mellifera yellow-h protein.           19   7.5  
AJ517411-1|CAD56944.1| 1770|Apis mellifera vitellogenin precurso...    19   7.5  

>AJ849455-1|CAH60991.1|  366|Apis mellifera twist protein protein.
          Length = 366

 Score = 21.4 bits (43), Expect = 1.1
 Identities = 7/19 (36%), Positives = 14/19 (73%)
 Frame = +1

Query: 115 SHHQLNDIKIYHQQNIHIM 171
           SHH L+  ++ +QQ+ ++M
Sbjct: 72  SHHHLHHHQVLYQQSPYLM 90


>DQ011228-1|AAY63897.1|  486|Apis mellifera Amt-2-like protein
           protein.
          Length = 486

 Score = 20.2 bits (40), Expect = 2.4
 Identities = 6/13 (46%), Positives = 10/13 (76%)
 Frame = -3

Query: 174 VHYMNVLLVVNFD 136
           +H+ NV+  +NFD
Sbjct: 1   MHFNNVIKYINFD 13


>DQ013068-1|AAY81956.1|  931|Apis mellifera dusty protein kinase
           isoform B protein.
          Length = 931

 Score = 19.8 bits (39), Expect = 3.2
 Identities = 11/29 (37%), Positives = 14/29 (48%)
 Frame = +3

Query: 96  NLFSLNLPSSIE*YQNLPPAEHSYNELPI 182
           N  SL L    E  +NL   E  ++ LPI
Sbjct: 70  NHISLTLDLEYELVENLQANEKPWSTLPI 98


>DQ013067-1|AAY81955.1|  969|Apis mellifera dusty protein kinase
           isoform A protein.
          Length = 969

 Score = 19.8 bits (39), Expect = 3.2
 Identities = 11/29 (37%), Positives = 14/29 (48%)
 Frame = +3

Query: 96  NLFSLNLPSSIE*YQNLPPAEHSYNELPI 182
           N  SL L    E  +NL   E  ++ LPI
Sbjct: 108 NHISLTLDLEYELVENLQANEKPWSTLPI 136


>EF625898-1|ABR45905.1|  686|Apis mellifera hexamerin protein.
          Length = 686

 Score = 19.4 bits (38), Expect = 4.3
 Identities = 8/22 (36%), Positives = 12/22 (54%)
 Frame = +1

Query: 112 ISHHQLNDIKIYHQQNIHIMNY 177
           I +    D+ IY++ N   MNY
Sbjct: 665 IPNMYFKDVFIYNRPNEESMNY 686


>EF589162-1|ABQ84439.1|  686|Apis mellifera hexamerin 70c protein.
          Length = 686

 Score = 19.4 bits (38), Expect = 4.3
 Identities = 8/22 (36%), Positives = 12/22 (54%)
 Frame = +1

Query: 112 ISHHQLNDIKIYHQQNIHIMNY 177
           I +    D+ IY++ N   MNY
Sbjct: 665 IPNMYFKDVFIYNRPNEESMNY 686


>EF625899-1|ABR45906.1| 1010|Apis mellifera high Glx storage protein
           protein.
          Length = 1010

 Score = 19.0 bits (37), Expect = 5.7
 Identities = 9/23 (39%), Positives = 11/23 (47%)
 Frame = +1

Query: 112 ISHHQLNDIKIYHQQNIHIMNYQ 180
           +  H L+   I   QNI I N Q
Sbjct: 162 LPQHHLDSRVIQEAQNIAIQNTQ 184


>AM050259-1|CAJ18340.1|  683|Apis mellifera putative H3K9
           methyltransferase protein.
          Length = 683

 Score = 19.0 bits (37), Expect = 5.7
 Identities = 6/16 (37%), Positives = 13/16 (81%)
 Frame = -3

Query: 150 VVNFDIIQLMMGDLKK 103
           V+  DI+++++ DL+K
Sbjct: 360 VIKHDILRMLIIDLRK 375


>DQ257416-1|ABB81847.1|  552|Apis mellifera yellow-h protein.
          Length = 552

 Score = 18.6 bits (36), Expect = 7.5
 Identities = 5/11 (45%), Positives = 9/11 (81%)
 Frame = +3

Query: 144 LPPAEHSYNEL 176
           +P +EH Y+E+
Sbjct: 541 VPDSEHGYDEI 551


>AJ517411-1|CAD56944.1| 1770|Apis mellifera vitellogenin precursor
            protein.
          Length = 1770

 Score = 18.6 bits (36), Expect = 7.5
 Identities = 9/23 (39%), Positives = 12/23 (52%)
 Frame = -3

Query: 171  HYMNVLLVVNFDIIQLMMGDLKK 103
            HY  V  V N DI+ L    ++K
Sbjct: 1035 HYSVVPFVSNHDILNLRPLSMEK 1057


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 39,126
Number of Sequences: 438
Number of extensions: 575
Number of successful extensions: 10
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10
length of database: 146,343
effective HSP length: 44
effective length of database: 127,071
effective search space used:  2668491
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 35 (18.9 bits)