Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmmt25c01
(662 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPAC1F3.03 |||Lgl family protein|Schizosaccharomyces pombe|chr 1... 29 0.60
SPAC19A8.03 |||phosphatidylinositol-3-phosphatase |Schizosacchar... 28 1.4
SPBC215.13 |||sequence orphan|Schizosaccharomyces pombe|chr 2|||... 27 1.8
SPBC14F5.02 |||sequence orphan|Schizosaccharomyces pombe|chr 2||... 27 1.8
SPBC2A9.06c |||di-trans,poly-cis-decaprenylcistransferase|Schizo... 26 4.2
SPAC2E1P3.05c |||fungal cellulose binding domain protein|Schizos... 26 4.2
SPBC1E8.05 |||conserved fungal protein|Schizosaccharomyces pombe... 26 4.2
SPBC18E5.11c |edc3|SPBC23G7.01c|enhancer of mRNA decapping Edc3 ... 26 5.6
SPAC4G8.13c |prz1||transcription factor Prz1 |Schizosaccharomyce... 25 7.4
SPAPB1E7.04c |||chitinase |Schizosaccharomyces pombe|chr 1|||Manual 25 7.4
SPBC32H8.13c |mok12||alpha-1,3-glucan synthase Mok12|Schizosacch... 25 7.4
SPAC11E3.13c |||1,3-beta-glucanosyltransferase |Schizosaccharomy... 25 9.7
SPBC4B4.04 |||translation initiation factor eIF2A |Schizosacchar... 25 9.7
>SPAC1F3.03 |||Lgl family protein|Schizosaccharomyces pombe|chr
1|||Manual
Length = 1004
Score = 29.1 bits (62), Expect = 0.60
Identities = 16/51 (31%), Positives = 28/51 (54%)
Frame = +2
Query: 314 DTVVTGLRGSKINSYKINLDKGKATIDFTANVTLKAHYVMDGQVLILPIRG 466
DT+V L G+ Y I+L +G+ T++ +N+ DG + I+ +RG
Sbjct: 573 DTLV--LEGTLHAQYYIDLKRGRVTLNQMSNIGFVCIGYQDGGITIIDMRG 621
>SPAC19A8.03 |||phosphatidylinositol-3-phosphatase
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 559
Score = 27.9 bits (59), Expect = 1.4
Identities = 11/34 (32%), Positives = 19/34 (55%)
Frame = +1
Query: 73 DSVVFDGCRRRDRGFSGEFTFLHQSVLSVRSKPQ 174
DSV++ GC+ R + T+LH++ S+ Q
Sbjct: 175 DSVIYYGCKYRSKNRFPTLTYLHKNSFSITRASQ 208
>SPBC215.13 |||sequence orphan|Schizosaccharomyces pombe|chr
2|||Manual
Length = 534
Score = 27.5 bits (58), Expect = 1.8
Identities = 19/82 (23%), Positives = 39/82 (47%), Gaps = 1/82 (1%)
Frame = -3
Query: 333 RPVTTVSVNVIFSAGLLTSTVPSWTGSRGAIPSSAMPSANFGAT-TSITFCMHSLRFGSD 157
+P + + + FS+ TST S+ S + SS+ PS++ +T TS + S+ S
Sbjct: 186 QPSVSSTSSSTFSSAAPTSTSSSYLSSSSVVSSSSSPSSSSSSTLTSSSLSTSSIPSTSS 245
Query: 156 AEHGLMKEGKFPAETSVAATTA 91
+ + +S A++++
Sbjct: 246 SSSSTSSSLSSSSSSSTASSSS 267
>SPBC14F5.02 |||sequence orphan|Schizosaccharomyces pombe|chr
2|||Manual
Length = 515
Score = 27.5 bits (58), Expect = 1.8
Identities = 12/28 (42%), Positives = 15/28 (53%)
Frame = +1
Query: 127 FTFLHQSVLSVRSKPQRMHTKSDRSGGS 210
FT+ H VL R P + HTK S G+
Sbjct: 339 FTYKHPPVLITRRTPTKTHTKQLSSSGN 366
>SPBC2A9.06c |||di-trans,
poly-cis-decaprenylcistransferase|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 258
Score = 26.2 bits (55), Expect = 4.2
Identities = 13/40 (32%), Positives = 23/40 (57%), Gaps = 3/40 (7%)
Frame = +2
Query: 143 SPCSASDPNLNECIQKVIEVVAPKFA-DGIAEL--GIAPL 253
+PCS + N N+C+ + ++A + D I +L G+A L
Sbjct: 136 NPCSPDEKNQNDCVDLKVHLIAKEDGRDAIIDLTRGLADL 175
>SPAC2E1P3.05c |||fungal cellulose binding domain
protein|Schizosaccharomyces pombe|chr 1|||Manual
Length = 197
Score = 26.2 bits (55), Expect = 4.2
Identities = 15/45 (33%), Positives = 26/45 (57%)
Frame = -3
Query: 324 TTVSVNVIFSAGLLTSTVPSWTGSRGAIPSSAMPSANFGATTSIT 190
+T S + + S+ LTS+ PS S +IPS + ++ +T+S T
Sbjct: 123 STTSSSSLVSSTTLTSSSPSAVSSTTSIPSISSTISSSVSTSSFT 167
>SPBC1E8.05 |||conserved fungal protein|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 317
Score = 26.2 bits (55), Expect = 4.2
Identities = 13/34 (38%), Positives = 21/34 (61%)
Frame = -3
Query: 330 PVTTVSVNVIFSAGLLTSTVPSWTGSRGAIPSSA 229
P ++ S + S+ +TST P+ + S GAI S+A
Sbjct: 212 PSSSKSSSKFSSSSFITSTTPASSSSSGAIVSNA 245
>SPBC18E5.11c |edc3|SPBC23G7.01c|enhancer of mRNA decapping Edc3
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 454
Score = 25.8 bits (54), Expect = 5.6
Identities = 17/67 (25%), Positives = 35/67 (52%), Gaps = 5/67 (7%)
Frame = -3
Query: 282 TSTVPSWTGSRGAIPSSAMPSANFGATTSITFCMHSLRFGSD--AEHGLMKE---GKFPA 118
T+ +P WT + GA+ ++ +A ++ + +L GS AE G+++ G++ A
Sbjct: 387 TAILPKWTLALGAVTTTLAQAALVKQAAGVSVFVGNLGTGSQTWAELGILESQVTGQYLA 446
Query: 117 ETSVAAT 97
+ S +T
Sbjct: 447 QISCTST 453
>SPAC4G8.13c |prz1||transcription factor Prz1 |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 681
Score = 25.4 bits (53), Expect = 7.4
Identities = 19/74 (25%), Positives = 37/74 (50%), Gaps = 7/74 (9%)
Frame = +2
Query: 98 VAATEVSAGNLP----SFISPCSASDPN---LNECIQKVIEVVAPKFADGIAELGIAPLD 256
+AA+E+S + P SF+ S S+P+ L + + E A F D +++ +D
Sbjct: 191 IAASEISPSSSPQLLTSFLPSGSVSNPSSPYLQGSVGALYEADAFNFVDVMSQASGTEVD 250
Query: 257 PVQLGTVEVNNPAL 298
+ +V+ +P+L
Sbjct: 251 SERFPSVDFEDPSL 264
>SPAPB1E7.04c |||chitinase |Schizosaccharomyces pombe|chr 1|||Manual
Length = 1236
Score = 25.4 bits (53), Expect = 7.4
Identities = 13/42 (30%), Positives = 23/42 (54%)
Frame = -3
Query: 315 SVNVIFSAGLLTSTVPSWTGSRGAIPSSAMPSANFGATTSIT 190
S + + S T +V S T PSS++ S++ +TTS++
Sbjct: 851 STSSVTSTAYTTDSVTSTTALTSQGPSSSVVSSSLSSTTSLS 892
>SPBC32H8.13c |mok12||alpha-1,3-glucan synthase
Mok12|Schizosaccharomyces pombe|chr 2|||Manual
Length = 2352
Score = 25.4 bits (53), Expect = 7.4
Identities = 14/38 (36%), Positives = 23/38 (60%)
Frame = +2
Query: 89 MAVVAATEVSAGNLPSFISPCSASDPNLNECIQKVIEV 202
+ +V + E+ A + S IS ++ D N +EC+ K IEV
Sbjct: 1735 LEIVESKEIYASD--SDISNSTSEDINKDECVSKDIEV 1770
>SPAC11E3.13c |||1,3-beta-glucanosyltransferase |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 510
Score = 25.0 bits (52), Expect = 9.7
Identities = 22/94 (23%), Positives = 40/94 (42%), Gaps = 4/94 (4%)
Frame = -3
Query: 324 TTVSVNVIFSAGLLTSTVPSWTGSRGAIPSSAMPSANFGATTSITFCMHSLRF----GSD 157
TT++ N++ + +ST S +GS A +++ S + G++ S S + GS
Sbjct: 411 TTINTNIVQATISQSSTSGSSSGSSSASTTASSSSVSSGSSISSGSSSMSTSYTSASGSS 470
Query: 156 AEHGLMKEGKFPAETSVAATTAIKHHTIMVILLI 55
A G A +S + + + IL I
Sbjct: 471 AHSSGSSSGSSSATSSASTFNLSRFYVFAGILAI 504
>SPBC4B4.04 |||translation initiation factor eIF2A
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 576
Score = 25.0 bits (52), Expect = 9.7
Identities = 13/34 (38%), Positives = 18/34 (52%)
Frame = +2
Query: 560 KDHYKMDRAQFKFNNLFGGNKELAQTTEKFTNQN 661
K +K D+ QFK+N L L QT +N+N
Sbjct: 210 KTFFKADKVQFKWNALGTSLLVLTQTEVDKSNKN 243
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,539,365
Number of Sequences: 5004
Number of extensions: 49815
Number of successful extensions: 134
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 129
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 134
length of database: 2,362,478
effective HSP length: 70
effective length of database: 2,012,198
effective search space used: 301829700
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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