Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmmt25b21
(673 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY569703-1|AAS86656.1| 396|Apis mellifera complementary sex det... 23 2.0
AY569701-1|AAS86654.1| 407|Apis mellifera complementary sex det... 23 2.0
AY569700-1|AAS86653.1| 407|Apis mellifera complementary sex det... 23 2.0
AY569699-1|AAS86652.1| 396|Apis mellifera complementary sex det... 23 2.0
EF540769-1|ABQ14707.1| 620|Apis mellifera adenosine deaminase p... 22 4.6
DQ026038-1|AAY87897.1| 520|Apis mellifera nicotinic acetylcholi... 22 4.6
DQ667186-1|ABG75738.1| 447|Apis mellifera glutamate-gated chlor... 22 6.1
DQ667185-1|ABG75737.1| 447|Apis mellifera glutamate-gated chlor... 22 6.1
S76958-1|AAB33933.1| 90|Apis mellifera olfactory receptor prot... 21 8.1
DQ325089-1|ABD14103.1| 185|Apis mellifera complementary sex det... 21 8.1
DQ325088-1|ABD14102.1| 185|Apis mellifera complementary sex det... 21 8.1
>AY569703-1|AAS86656.1| 396|Apis mellifera complementary sex
determiner protein.
Length = 396
Score = 23.4 bits (48), Expect = 2.0
Identities = 9/23 (39%), Positives = 12/23 (52%)
Frame = -3
Query: 215 ISRKL*ILVHNNRRFSKFYYYRV 147
IS L +HNN + K YY +
Sbjct: 304 ISSLLNNTIHNNNNYKKLQYYNI 326
>AY569701-1|AAS86654.1| 407|Apis mellifera complementary sex
determiner protein.
Length = 407
Score = 23.4 bits (48), Expect = 2.0
Identities = 9/23 (39%), Positives = 12/23 (52%)
Frame = -3
Query: 215 ISRKL*ILVHNNRRFSKFYYYRV 147
IS L +HNN + K YY +
Sbjct: 315 ISSLLNNTIHNNNNYKKLQYYNI 337
>AY569700-1|AAS86653.1| 407|Apis mellifera complementary sex
determiner protein.
Length = 407
Score = 23.4 bits (48), Expect = 2.0
Identities = 9/23 (39%), Positives = 12/23 (52%)
Frame = -3
Query: 215 ISRKL*ILVHNNRRFSKFYYYRV 147
IS L +HNN + K YY +
Sbjct: 315 ISSLLNNTIHNNNNYKKLQYYNI 337
>AY569699-1|AAS86652.1| 396|Apis mellifera complementary sex
determiner protein.
Length = 396
Score = 23.4 bits (48), Expect = 2.0
Identities = 9/23 (39%), Positives = 12/23 (52%)
Frame = -3
Query: 215 ISRKL*ILVHNNRRFSKFYYYRV 147
IS L +HNN + K YY +
Sbjct: 304 ISSLLNNTIHNNNNYKKLQYYNI 326
>EF540769-1|ABQ14707.1| 620|Apis mellifera adenosine deaminase
protein.
Length = 620
Score = 22.2 bits (45), Expect = 4.6
Identities = 9/18 (50%), Positives = 11/18 (61%)
Frame = -2
Query: 576 LQKKNCKSTFICVTTGEK 523
+Q K + ICVTTG K
Sbjct: 283 VQTKGSDAELICVTTGTK 300
>DQ026038-1|AAY87897.1| 520|Apis mellifera nicotinic acetylcholine
receptor beta1subunit protein.
Length = 520
Score = 22.2 bits (45), Expect = 4.6
Identities = 18/67 (26%), Positives = 28/67 (41%)
Frame = -3
Query: 401 LFYLIELQIQTTLSQFHYAHCMYYSP*TVTNISYGISEN*LLIMFSWNDHKFLLSFSDII 222
LFY + L + T L F Y ++ GIS L++F K L S ++
Sbjct: 234 LFYTVNLILPTVLISFLCVLVFYLPAEAGEKVTLGISILLSLVVFLLLVSKILPPTSLVL 293
Query: 221 TFISRKL 201
I++ L
Sbjct: 294 PLIAKYL 300
>DQ667186-1|ABG75738.1| 447|Apis mellifera glutamate-gated chloride
channel protein.
Length = 447
Score = 21.8 bits (44), Expect = 6.1
Identities = 10/40 (25%), Positives = 23/40 (57%)
Frame = +3
Query: 270 HY*KLVFRNPVRNIGYRSGAIIHTMCIMKLT*CRLNLQLY 389
H+ ++ N I + +G++++++ I C +NL+LY
Sbjct: 129 HFHNIIMPNVYIRI-FPNGSVLYSIRISLTLSCPMNLKLY 167
>DQ667185-1|ABG75737.1| 447|Apis mellifera glutamate-gated chloride
channel protein.
Length = 447
Score = 21.8 bits (44), Expect = 6.1
Identities = 10/40 (25%), Positives = 23/40 (57%)
Frame = +3
Query: 270 HY*KLVFRNPVRNIGYRSGAIIHTMCIMKLT*CRLNLQLY 389
H+ ++ N I + +G++++++ I C +NL+LY
Sbjct: 129 HFHNIIMPNVYIRI-FPNGSVLYSIRISLTLSCPMNLKLY 167
>S76958-1|AAB33933.1| 90|Apis mellifera olfactory receptor
protein.
Length = 90
Score = 21.4 bits (43), Expect = 8.1
Identities = 9/26 (34%), Positives = 14/26 (53%)
Frame = +2
Query: 524 FSPVVTQIKVLLQFFFCKLTI*EFYF 601
F + QI V++Q FC + + YF
Sbjct: 13 FCHSIIQIPVIIQLPFCGPNVIDHYF 38
>DQ325089-1|ABD14103.1| 185|Apis mellifera complementary sex
determiner protein.
Length = 185
Score = 21.4 bits (43), Expect = 8.1
Identities = 5/17 (29%), Positives = 12/17 (70%)
Frame = -3
Query: 188 HNNRRFSKFYYYRVVSV 138
+NN ++K YY ++++
Sbjct: 103 YNNNNYNKKLYYNIINI 119
>DQ325088-1|ABD14102.1| 185|Apis mellifera complementary sex
determiner protein.
Length = 185
Score = 21.4 bits (43), Expect = 8.1
Identities = 5/17 (29%), Positives = 12/17 (70%)
Frame = -3
Query: 188 HNNRRFSKFYYYRVVSV 138
+NN ++K YY ++++
Sbjct: 103 YNNNNYNKKLYYNIINI 119
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 162,608
Number of Sequences: 438
Number of extensions: 3438
Number of successful extensions: 13
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 13
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 13
length of database: 146,343
effective HSP length: 56
effective length of database: 121,815
effective search space used: 20343105
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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