Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmmt25b15
         (686 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z68296-6|CAE17754.1|  195|Caenorhabditis elegans Hypothetical pr...    32   0.33 
U39644-2|AAA80360.2|  966|Caenorhabditis elegans Hypothetical pr...    31   1.0  
Z95559-9|CAI46625.1|  510|Caenorhabditis elegans Hypothetical pr...    30   1.8  
Z92804-2|CAB07253.2|  321|Caenorhabditis elegans Hypothetical pr...    29   3.1  
Z71181-9|CAD44140.1|  960|Caenorhabditis elegans Hypothetical pr...    29   3.1  
Z71178-15|CAD44087.1|  960|Caenorhabditis elegans Hypothetical p...    29   3.1  
Z75533-8|CAA99821.1|  464|Caenorhabditis elegans Hypothetical pr...    28   5.4  
Z82083-2|CAB04970.1|  263|Caenorhabditis elegans Hypothetical pr...    27   9.5  

>Z68296-6|CAE17754.1|  195|Caenorhabditis elegans Hypothetical
           protein C46C2.6a protein.
          Length = 195

 Score = 32.3 bits (70), Expect = 0.33
 Identities = 17/54 (31%), Positives = 29/54 (53%), Gaps = 2/54 (3%)
 Frame = +2

Query: 179 CPKNTEHRARHAGKCACCPACVTLLGEGATC-KIYSKELGETPSAXCK-EPLKC 334
           CP + +   +H+G+CA   AC+     G  C K++S ++  T    CK +P+ C
Sbjct: 60  CPSDYDFIRQHSGRCADGTACIPDSSFGEPCIKLFSYQM--TKKFCCKSDPIDC 111


>U39644-2|AAA80360.2|  966|Caenorhabditis elegans Hypothetical
           protein T10E10.4 protein.
          Length = 966

 Score = 30.7 bits (66), Expect = 1.0
 Identities = 23/81 (28%), Positives = 29/81 (35%), Gaps = 5/81 (6%)
 Frame = +2

Query: 131 GTDYCEKNPCXQPPLVCPKNTEHRARHAGKCA-CCPACVTLLGEGATCKIYSKELG---- 295
           G D C    C   P  CP N     R +G C  CCP   T +  G  C + S   G    
Sbjct: 530 GVD-CNNGACCPLP-TCPNNIASSQRCSGGCTNCCPVGQTCM-NGGCCDLPSCPSGGFAI 586

Query: 296 ETPSAXCKEPLKCIKRVCTKL 358
              +  C    +C+   C  L
Sbjct: 587 SMCTGKCGTGFECVNSGCCSL 607


>Z95559-9|CAI46625.1|  510|Caenorhabditis elegans Hypothetical
           protein Y41E3.18 protein.
          Length = 510

 Score = 29.9 bits (64), Expect = 1.8
 Identities = 11/27 (40%), Positives = 14/27 (51%)
 Frame = +2

Query: 185 KNTEHRARHAGKCACCPACVTLLGEGA 265
           K T HR +H    ACCP C  ++   A
Sbjct: 147 KGTWHRVKHVVFVACCPPCCCIIQRSA 173


>Z92804-2|CAB07253.2|  321|Caenorhabditis elegans Hypothetical
           protein K05D4.3 protein.
          Length = 321

 Score = 29.1 bits (62), Expect = 3.1
 Identities = 10/33 (30%), Positives = 23/33 (69%)
 Frame = -3

Query: 429 IIFRTGRDRSIASLYFPANENDYTSLVQTLLMH 331
           ++FR+ R R  ++  FP  ++ Y+++V+T ++H
Sbjct: 47  VVFRSNRQRDRSTPIFPIIKHFYSTVVRTYILH 79


>Z71181-9|CAD44140.1|  960|Caenorhabditis elegans Hypothetical
           protein B0024.14b protein.
          Length = 960

 Score = 29.1 bits (62), Expect = 3.1
 Identities = 28/103 (27%), Positives = 42/103 (40%), Gaps = 10/103 (9%)
 Frame = +2

Query: 71  LIFIMLVACVASAAYGALVCGTDYCEKNPCXQPPLVCPKNTEHRARHAGKCACCPACVTL 250
           L+F  L+   A      L CGT  C+K+ C       P  +        +C CC  C+  
Sbjct: 9   LLFTFLIISNAKNQKTTL-CGT--CDKDSC-------PDVSGCEQLKKDQCDCCEVCIRQ 58

Query: 251 LGE-----GATCKIY---SKELGETPSAXCKEPL--KCIKRVC 349
           +GE     G  C  +    +E     S+ CKE +   C+K +C
Sbjct: 59  IGETCDGPGLVCDSHLSCHQENDLDGSSRCKERMHDDCLKAIC 101


>Z71178-15|CAD44087.1|  960|Caenorhabditis elegans Hypothetical
           protein B0024.14b protein.
          Length = 960

 Score = 29.1 bits (62), Expect = 3.1
 Identities = 28/103 (27%), Positives = 42/103 (40%), Gaps = 10/103 (9%)
 Frame = +2

Query: 71  LIFIMLVACVASAAYGALVCGTDYCEKNPCXQPPLVCPKNTEHRARHAGKCACCPACVTL 250
           L+F  L+   A      L CGT  C+K+ C       P  +        +C CC  C+  
Sbjct: 9   LLFTFLIISNAKNQKTTL-CGT--CDKDSC-------PDVSGCEQLKKDQCDCCEVCIRQ 58

Query: 251 LGE-----GATCKIY---SKELGETPSAXCKEPL--KCIKRVC 349
           +GE     G  C  +    +E     S+ CKE +   C+K +C
Sbjct: 59  IGETCDGPGLVCDSHLSCHQENDLDGSSRCKERMHDDCLKAIC 101


>Z75533-8|CAA99821.1|  464|Caenorhabditis elegans Hypothetical
           protein C54G4.9 protein.
          Length = 464

 Score = 28.3 bits (60), Expect = 5.4
 Identities = 13/22 (59%), Positives = 14/22 (63%)
 Frame = +1

Query: 4   FSILTCTQDYYEKRIQKFQNEN 69
           FSILTCT    E RI +F  EN
Sbjct: 443 FSILTCTYKNAEDRILEFMKEN 464


>Z82083-2|CAB04970.1|  263|Caenorhabditis elegans Hypothetical
           protein ZK1010.4 protein.
          Length = 263

 Score = 27.5 bits (58), Expect = 9.5
 Identities = 14/32 (43%), Positives = 18/32 (56%), Gaps = 2/32 (6%)
 Frame = +2

Query: 68  TLIFIMLVA--CVASAAYGALVCGTDYCEKNP 157
           T IF++LVA   V  A   + VCG+ YC   P
Sbjct: 5   TTIFLVLVAGAVVTEACLSSGVCGSSYCAAPP 36


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,228,092
Number of Sequences: 27780
Number of extensions: 319529
Number of successful extensions: 839
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 800
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 839
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1571291122
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)