Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmmt25b08
(741 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BC052302-1|AAH52302.1| 257|Homo sapiens THO complex 4 protein. 51 5e-06
X56597-1|CAA39935.1| 321|Homo sapiens fibrillarin protein. 37 0.066
M59849-1|AAA52453.1| 321|Homo sapiens fibrillarin protein. 37 0.066
CR457069-1|CAG33350.1| 321|Homo sapiens FBL protein. 37 0.066
BT020144-1|AAV38946.1| 321|Homo sapiens fibrillarin protein. 37 0.066
BT006830-1|AAP35476.1| 321|Homo sapiens fibrillarin protein. 37 0.066
BC019260-1|AAH19260.1| 321|Homo sapiens fibrillarin protein. 37 0.066
AC006950-1|AAD15623.1| 227|Homo sapiens FBRL_HUMAN [AA 1- 227] ... 37 0.066
AC005393-3|AAC28913.1| 318|Homo sapiens FBRL_HUMAN protein. 37 0.066
BC018637-1|AAH18637.2| 423|Homo sapiens DDX50 protein protein. 37 0.087
BC003413-1|AAH03413.1| 217|Homo sapiens nucleolar protein famil... 36 0.15
AY780787-1|AAV98357.1| 199|Homo sapiens nucleolar protein famil... 36 0.15
AJ276003-1|CAB76563.1| 217|Homo sapiens GAR1 protein protein. 36 0.15
X71427-1|CAA50558.1| 462|Homo sapiens FUS-CHOP protein fusion p... 36 0.20
S62138-1|AAB27103.1| 462|Homo sapiens TLS-CHOP protein. 36 0.20
BC063533-1|AAH63533.1| 362|Homo sapiens apoptosis, caspase acti... 35 0.35
BC010488-1|AAH10488.1| 362|Homo sapiens apoptosis, caspase acti... 35 0.35
AY497060-1|AAS45485.1| 1472|Homo sapiens bromodomain and WD repe... 35 0.35
AY497059-1|AAS45484.1| 1398|Homo sapiens bromodomain and WD repe... 35 0.35
AY497058-1|AAS45483.1| 1398|Homo sapiens bromodomain and WD repe... 35 0.35
AY497057-1|AAS45482.1| 1398|Homo sapiens bromodomain and WD repe... 35 0.35
AY497056-1|AAS45481.1| 1398|Homo sapiens bromodomain and WD repe... 35 0.35
AY497055-1|AAS45480.1| 1472|Homo sapiens bromodomain and WD repe... 35 0.35
AY497054-1|AAS45479.1| 1472|Homo sapiens bromodomain and WD repe... 35 0.35
AY497053-1|AAS45478.1| 1472|Homo sapiens bromodomain and WD repe... 35 0.35
AY497052-1|AAS45477.1| 1398|Homo sapiens bromodomain and WD repe... 35 0.35
AY497051-1|AAS45476.1| 1398|Homo sapiens bromodomain and WD repe... 35 0.35
AY497050-1|AAS45475.1| 1398|Homo sapiens bromodomain and WD repe... 35 0.35
AY497049-1|AAS45474.1| 1398|Homo sapiens bromodomain and WD repe... 35 0.35
AY497048-1|AAS45473.1| 1398|Homo sapiens bromodomain and WD repe... 35 0.35
AY497047-1|AAS45472.1| 1631|Homo sapiens bromodomain and WD repe... 35 0.35
AY497046-1|AAS45471.1| 1802|Homo sapiens bromodomain and WD repe... 35 0.35
AL669934-1|CAI95405.1| 1802|Homo sapiens bromodomain and WD repe... 35 0.35
AL590031-1|CAI39936.2| 1802|Homo sapiens bromodomain and WD repe... 35 0.35
AL512504-2|CAI95143.1| 1802|Homo sapiens bromodomain and WD repe... 35 0.35
AF283508-1|AAF91470.1| 362|Homo sapiens cell death regulator av... 35 0.35
BC000272-1|AAH00272.1| 737|Homo sapiens DEAD (Asp-Glu-Ala-Asp) ... 34 0.47
BC000210-1|AAH00210.1| 467|Homo sapiens DDX50 protein protein. 34 0.47
AL359844-2|CAH72376.1| 737|Homo sapiens DEAD (Asp-Glu-Ala-Asp) ... 34 0.47
AL137423-1|CAB70733.1| 399|Homo sapiens hypothetical protein pr... 34 0.47
AF334103-1|AAK29402.1| 737|Homo sapiens nucleolar protein GU2 p... 34 0.47
CR533502-1|CAG38533.1| 318|Homo sapiens DKFZp761B1514 protein. 33 1.1
BC035006-1|AAH35006.1| 318|Homo sapiens forty-two-three domain ... 33 1.1
AK027672-1|BAB55284.1| 318|Homo sapiens protein ( Homo sapiens ... 33 1.1
BC039734-1|AAH39734.1| 318|Homo sapiens forty-two-three domain ... 33 1.4
AJ344094-1|CAC51432.1| 318|Homo sapiens putative 40-2-3 protein... 33 1.4
X71428-1|CAA50559.1| 525|Homo sapiens FUS gycline rich protein ... 32 2.5
S75762-1|AAB32714.2| 195|Homo sapiens FUS-CHOP fusion protein p... 32 2.5
S62140-1|AAB27102.1| 526|Homo sapiens TLS protein. 32 2.5
CR456747-1|CAG33028.1| 526|Homo sapiens FUS protein. 32 2.5
BT007131-1|AAP35795.1| 526|Homo sapiens fusion, derived from t(... 32 2.5
BC026062-1|AAH26062.1| 526|Homo sapiens fusion (involved in t(1... 32 2.5
BC002459-1|AAH02459.1| 526|Homo sapiens fusion (involved in t(1... 32 2.5
BC000402-1|AAH00402.1| 526|Homo sapiens fusion (involved in t(1... 32 2.5
AF071213-2|AAC35284.1| 525|Homo sapiens FUS/TLS protein protein. 32 2.5
AF071213-1|AAC35285.1| 526|Homo sapiens FUS/TLS protein protein. 32 2.5
X98893-1|CAA67398.1| 589|Homo sapiens hTAFII68 protein. 31 4.3
U51334-1|AAC50932.1| 592|Homo sapiens putative RNA binding prot... 31 4.3
U36561-1|AAA79948.1| 528|Homo sapiens fus-like protein protein. 31 4.3
BC046099-1|AAH46099.2| 592|Homo sapiens TAF15 RNA polymerase II... 31 4.3
AY197697-1|AAO13485.1| 589|Homo sapiens TAF15 RNA polymerase II... 31 4.3
AB010067-2|BAA33812.1| 589|Homo sapiens RBP56/hTAFII68 protein. 31 4.3
AB010067-1|BAA33811.1| 592|Homo sapiens RBP56/hTAFII68 protein. 31 4.3
>BC052302-1|AAH52302.1| 257|Homo sapiens THO complex 4 protein.
Length = 257
Score = 50.8 bits (116), Expect = 5e-06
Identities = 29/58 (50%), Positives = 36/58 (62%), Gaps = 3/58 (5%)
Frame = +3
Query: 96 MVDQIEMALDDIIKANKKTRIGGGAGR-KFDANKRTGRGGG--AGFRSNRSGGVQRGR 260
M D+++M+LDDIIK N+ R G G GR + A + GRGGG A R NR GG R R
Sbjct: 1 MADKMDMSLDDIIKLNRSQRGGRGGGRGRGRAGSQGGRGGGAQAAARVNRGGGPIRNR 58
>X56597-1|CAA39935.1| 321|Homo sapiens fibrillarin protein.
Length = 321
Score = 37.1 bits (82), Expect = 0.066
Identities = 20/39 (51%), Positives = 21/39 (53%), Gaps = 1/39 (2%)
Frame = +3
Query: 159 GGGAGRKFDANKRTGRGGGAGFRSNRS-GGVQRGRNRGG 272
GGG G + R GRGG GF R GG RGR RGG
Sbjct: 9 GGGFGGRGGFGDRGGRGGRGGFGGGRGRGGGFRGRGRGG 47
>M59849-1|AAA52453.1| 321|Homo sapiens fibrillarin protein.
Length = 321
Score = 37.1 bits (82), Expect = 0.066
Identities = 20/39 (51%), Positives = 21/39 (53%), Gaps = 1/39 (2%)
Frame = +3
Query: 159 GGGAGRKFDANKRTGRGGGAGFRSNRS-GGVQRGRNRGG 272
GGG G + R GRGG GF R GG RGR RGG
Sbjct: 9 GGGFGGRGGFGDRGGRGGRGGFGGGRGRGGGFRGRGRGG 47
>CR457069-1|CAG33350.1| 321|Homo sapiens FBL protein.
Length = 321
Score = 37.1 bits (82), Expect = 0.066
Identities = 20/39 (51%), Positives = 21/39 (53%), Gaps = 1/39 (2%)
Frame = +3
Query: 159 GGGAGRKFDANKRTGRGGGAGFRSNRS-GGVQRGRNRGG 272
GGG G + R GRGG GF R GG RGR RGG
Sbjct: 9 GGGFGGRGGFGDRGGRGGRGGFGGGRGRGGGFRGRGRGG 47
>BT020144-1|AAV38946.1| 321|Homo sapiens fibrillarin protein.
Length = 321
Score = 37.1 bits (82), Expect = 0.066
Identities = 20/39 (51%), Positives = 21/39 (53%), Gaps = 1/39 (2%)
Frame = +3
Query: 159 GGGAGRKFDANKRTGRGGGAGFRSNRS-GGVQRGRNRGG 272
GGG G + R GRGG GF R GG RGR RGG
Sbjct: 9 GGGFGGRGGFGDRGGRGGRGGFGGGRGRGGGFRGRGRGG 47
>BT006830-1|AAP35476.1| 321|Homo sapiens fibrillarin protein.
Length = 321
Score = 37.1 bits (82), Expect = 0.066
Identities = 20/39 (51%), Positives = 21/39 (53%), Gaps = 1/39 (2%)
Frame = +3
Query: 159 GGGAGRKFDANKRTGRGGGAGFRSNRS-GGVQRGRNRGG 272
GGG G + R GRGG GF R GG RGR RGG
Sbjct: 9 GGGFGGRGGFGDRGGRGGRGGFGGGRGRGGGFRGRGRGG 47
>BC019260-1|AAH19260.1| 321|Homo sapiens fibrillarin protein.
Length = 321
Score = 37.1 bits (82), Expect = 0.066
Identities = 20/39 (51%), Positives = 21/39 (53%), Gaps = 1/39 (2%)
Frame = +3
Query: 159 GGGAGRKFDANKRTGRGGGAGFRSNRS-GGVQRGRNRGG 272
GGG G + R GRGG GF R GG RGR RGG
Sbjct: 9 GGGFGGRGGFGDRGGRGGRGGFGGGRGRGGGFRGRGRGG 47
>AC006950-1|AAD15623.1| 227|Homo sapiens FBRL_HUMAN [AA 1- 227]
protein.
Length = 227
Score = 37.1 bits (82), Expect = 0.066
Identities = 20/39 (51%), Positives = 21/39 (53%), Gaps = 1/39 (2%)
Frame = +3
Query: 159 GGGAGRKFDANKRTGRGGGAGFRSNRS-GGVQRGRNRGG 272
GGG G + R GRGG GF R GG RGR RGG
Sbjct: 9 GGGFGGRGGFGDRGGRGGRGGFGGGRGRGGGFRGRGRGG 47
>AC005393-3|AAC28913.1| 318|Homo sapiens FBRL_HUMAN protein.
Length = 318
Score = 37.1 bits (82), Expect = 0.066
Identities = 20/39 (51%), Positives = 21/39 (53%), Gaps = 1/39 (2%)
Frame = +3
Query: 159 GGGAGRKFDANKRTGRGGGAGFRSNRS-GGVQRGRNRGG 272
GGG G + R GRGG GF R GG RGR RGG
Sbjct: 6 GGGFGGRGGFGDRGGRGGRGGFGGGRGRGGGFRGRGRGG 44
>BC018637-1|AAH18637.2| 423|Homo sapiens DDX50 protein protein.
Length = 423
Score = 36.7 bits (81), Expect = 0.087
Identities = 21/65 (32%), Positives = 32/65 (49%)
Frame = +3
Query: 105 QIEMALDDIIKANKKTRIGGGAGRKFDANKRTGRGGGAGFRSNRSGGVQRGRNRGGITKS 284
+IE D +N + RIG +GR + + GR GG R +R G + G + G +S
Sbjct: 349 EIEEYYDGNTSSNSRQRIGWSSGRSGRSGRSGGRSGGRSGRQSRQGS-RSGSRQDGRRRS 407
Query: 285 TNYSR 299
N +R
Sbjct: 408 GNRNR 412
>BC003413-1|AAH03413.1| 217|Homo sapiens nucleolar protein family
A, member 1 (H/ACA small nucleolar RNPs) protein.
Length = 217
Score = 35.9 bits (79), Expect = 0.15
Identities = 20/44 (45%), Positives = 21/44 (47%), Gaps = 3/44 (6%)
Frame = +3
Query: 159 GGGAGRKFDANKRTGRGGGAG---FRSNRSGGVQRGRNRGGITK 281
GGG R +N G GGG G FR GG RG RGG K
Sbjct: 17 GGGFNRGGSSNHFRGGGGGGGGGNFRGGGRGGFGRGGGRGGFNK 60
Score = 33.1 bits (72), Expect = 1.1
Identities = 20/37 (54%), Positives = 20/37 (54%), Gaps = 1/37 (2%)
Frame = +3
Query: 153 RIGGGAGRKFDANKRTGR-GGGAGFRSNRSGGVQRGR 260
R GGG G R GR GGG GFR R GG RGR
Sbjct: 180 RGGGGRGGGRGGGFRGGRGGGGGGFRGGRGGGF-RGR 215
Score = 30.7 bits (66), Expect = 5.7
Identities = 19/40 (47%), Positives = 20/40 (50%), Gaps = 2/40 (5%)
Frame = +3
Query: 159 GGGAGRKFDANKRTGRGG--GAGFRSNRSGGVQRGRNRGG 272
GGG G + GRGG G GFR R GG G RGG
Sbjct: 170 GGGRGGRGGGRGGGGRGGGRGGGFRGGRGGG--GGGFRGG 207
>AY780787-1|AAV98357.1| 199|Homo sapiens nucleolar protein family A
member 1 protein.
Length = 199
Score = 35.9 bits (79), Expect = 0.15
Identities = 20/44 (45%), Positives = 21/44 (47%), Gaps = 3/44 (6%)
Frame = +3
Query: 159 GGGAGRKFDANKRTGRGGGAG---FRSNRSGGVQRGRNRGGITK 281
GGG R +N G GGG G FR GG RG RGG K
Sbjct: 17 GGGFNRGGSSNHFRGGGGGGGGDNFRGGGRGGFGRGGGRGGFNK 60
Score = 31.9 bits (69), Expect = 2.5
Identities = 18/34 (52%), Positives = 19/34 (55%)
Frame = +3
Query: 159 GGGAGRKFDANKRTGRGGGAGFRSNRSGGVQRGR 260
GGG G + GRGGG GFR R GG RGR
Sbjct: 170 GGGRG-----GRGGGRGGGGGFRGGRGGGF-RGR 197
>AJ276003-1|CAB76563.1| 217|Homo sapiens GAR1 protein protein.
Length = 217
Score = 35.9 bits (79), Expect = 0.15
Identities = 20/44 (45%), Positives = 21/44 (47%), Gaps = 3/44 (6%)
Frame = +3
Query: 159 GGGAGRKFDANKRTGRGGGAG---FRSNRSGGVQRGRNRGGITK 281
GGG R +N G GGG G FR GG RG RGG K
Sbjct: 17 GGGFNRGGSSNHFRGGGGGGGGGNFRGGGRGGFGRGGGRGGFNK 60
Score = 33.1 bits (72), Expect = 1.1
Identities = 20/37 (54%), Positives = 20/37 (54%), Gaps = 1/37 (2%)
Frame = +3
Query: 153 RIGGGAGRKFDANKRTGR-GGGAGFRSNRSGGVQRGR 260
R GGG G R GR GGG GFR R GG RGR
Sbjct: 180 RGGGGRGGGRGGGFRGGRGGGGGGFRGGRGGGF-RGR 215
Score = 30.7 bits (66), Expect = 5.7
Identities = 19/40 (47%), Positives = 20/40 (50%), Gaps = 2/40 (5%)
Frame = +3
Query: 159 GGGAGRKFDANKRTGRGG--GAGFRSNRSGGVQRGRNRGG 272
GGG G + GRGG G GFR R GG G RGG
Sbjct: 170 GGGRGGRGGGRGGGGRGGGRGGGFRGGRGGG--GGGFRGG 207
>X71427-1|CAA50558.1| 462|Homo sapiens FUS-CHOP protein fusion
protein.
Length = 462
Score = 35.5 bits (78), Expect = 0.20
Identities = 18/53 (33%), Positives = 24/53 (45%)
Frame = +3
Query: 159 GGGAGRKFDANKRTGRGGGAGFRSNRSGGVQRGRNRGGITKSTNYSRVIPIIR 317
GGG R + GRGGG G R G + G N+ G+ K Y P ++
Sbjct: 229 GGGYNRSSGGYEPRGRGGGRGGRGGMGGSDRGGFNKFGVFKKEVYLHTSPHLK 281
Score = 31.9 bits (69), Expect = 2.5
Identities = 14/38 (36%), Positives = 20/38 (52%)
Frame = +3
Query: 159 GGGAGRKFDANKRTGRGGGAGFRSNRSGGVQRGRNRGG 272
GGG+G + ++G GG G+ GG RG + GG
Sbjct: 187 GGGSGGGYGNQDQSGGGGSGGYGQQDRGGRGRGGSGGG 224
>S62138-1|AAB27103.1| 462|Homo sapiens TLS-CHOP protein.
Length = 462
Score = 35.5 bits (78), Expect = 0.20
Identities = 18/53 (33%), Positives = 24/53 (45%)
Frame = +3
Query: 159 GGGAGRKFDANKRTGRGGGAGFRSNRSGGVQRGRNRGGITKSTNYSRVIPIIR 317
GGG R + GRGGG G R G + G N+ G+ K Y P ++
Sbjct: 229 GGGYNRSSGGYEPRGRGGGRGGRGGMGGSDRGGFNKFGVFKKEVYLHTSPHLK 281
Score = 31.9 bits (69), Expect = 2.5
Identities = 14/38 (36%), Positives = 20/38 (52%)
Frame = +3
Query: 159 GGGAGRKFDANKRTGRGGGAGFRSNRSGGVQRGRNRGG 272
GGG+G + ++G GG G+ GG RG + GG
Sbjct: 187 GGGSGGGYGNQDQSGGGGSGGYGQQDRGGRGRGGSGGG 224
>BC063533-1|AAH63533.1| 362|Homo sapiens apoptosis, caspase
activation inhibitor protein.
Length = 362
Score = 34.7 bits (76), Expect = 0.35
Identities = 18/37 (48%), Positives = 18/37 (48%)
Frame = +3
Query: 159 GGGAGRKFDANKRTGRGGGAGFRSNRSGGVQRGRNRG 269
GGG G D R GRG G GFR R G G RG
Sbjct: 38 GGGGGGGGDGGGRRGRGRGRGFRGARGGRGGGGAPRG 74
>BC010488-1|AAH10488.1| 362|Homo sapiens apoptosis, caspase
activation inhibitor protein.
Length = 362
Score = 34.7 bits (76), Expect = 0.35
Identities = 18/37 (48%), Positives = 18/37 (48%)
Frame = +3
Query: 159 GGGAGRKFDANKRTGRGGGAGFRSNRSGGVQRGRNRG 269
GGG G D R GRG G GFR R G G RG
Sbjct: 38 GGGGGGGGDGGGRRGRGRGRGFRGARGGRGGGGAPRG 74
>AY497060-1|AAS45485.1| 1472|Homo sapiens bromodomain and WD repeat
domain containing 3 variant BRWD3-P protein.
Length = 1472
Score = 34.7 bits (76), Expect = 0.35
Identities = 25/49 (51%), Positives = 27/49 (55%), Gaps = 4/49 (8%)
Frame = +3
Query: 135 KANKKTRIGGGAGR--KFDANKRTGRG-GGAGFRSN-RSGGVQRGRNRG 269
K N KTR GG GR ++ R GRG GG G S R GG RGR RG
Sbjct: 1332 KRNWKTRGTGGRGRWGRWGRWSRGGRGRGGRGRGSRGRGGGGTRGRGRG 1380
>AY497059-1|AAS45484.1| 1398|Homo sapiens bromodomain and WD repeat
domain containing 3 variant BRWD3-O protein.
Length = 1398
Score = 34.7 bits (76), Expect = 0.35
Identities = 25/49 (51%), Positives = 27/49 (55%), Gaps = 4/49 (8%)
Frame = +3
Query: 135 KANKKTRIGGGAGR--KFDANKRTGRG-GGAGFRSN-RSGGVQRGRNRG 269
K N KTR GG GR ++ R GRG GG G S R GG RGR RG
Sbjct: 1258 KRNWKTRGTGGRGRWGRWGRWSRGGRGRGGRGRGSRGRGGGGTRGRGRG 1306
>AY497058-1|AAS45483.1| 1398|Homo sapiens bromodomain and WD repeat
domain containing 3 variant BRWD3-N protein.
Length = 1398
Score = 34.7 bits (76), Expect = 0.35
Identities = 25/49 (51%), Positives = 27/49 (55%), Gaps = 4/49 (8%)
Frame = +3
Query: 135 KANKKTRIGGGAGR--KFDANKRTGRG-GGAGFRSN-RSGGVQRGRNRG 269
K N KTR GG GR ++ R GRG GG G S R GG RGR RG
Sbjct: 1258 KRNWKTRGTGGRGRWGRWGRWSRGGRGRGGRGRGSRGRGGGGTRGRGRG 1306
>AY497057-1|AAS45482.1| 1398|Homo sapiens bromodomain and WD repeat
domain containing 3 variant BRWD3-M protein.
Length = 1398
Score = 34.7 bits (76), Expect = 0.35
Identities = 25/49 (51%), Positives = 27/49 (55%), Gaps = 4/49 (8%)
Frame = +3
Query: 135 KANKKTRIGGGAGR--KFDANKRTGRG-GGAGFRSN-RSGGVQRGRNRG 269
K N KTR GG GR ++ R GRG GG G S R GG RGR RG
Sbjct: 1258 KRNWKTRGTGGRGRWGRWGRWSRGGRGRGGRGRGSRGRGGGGTRGRGRG 1306
>AY497056-1|AAS45481.1| 1398|Homo sapiens bromodomain and WD repeat
domain containing 3 variant BRWD3-L protein.
Length = 1398
Score = 34.7 bits (76), Expect = 0.35
Identities = 25/49 (51%), Positives = 27/49 (55%), Gaps = 4/49 (8%)
Frame = +3
Query: 135 KANKKTRIGGGAGR--KFDANKRTGRG-GGAGFRSN-RSGGVQRGRNRG 269
K N KTR GG GR ++ R GRG GG G S R GG RGR RG
Sbjct: 1258 KRNWKTRGTGGRGRWGRWGRWSRGGRGRGGRGRGSRGRGGGGTRGRGRG 1306
>AY497055-1|AAS45480.1| 1472|Homo sapiens bromodomain and WD repeat
domain containing 3 variant BRWD3-K protein.
Length = 1472
Score = 34.7 bits (76), Expect = 0.35
Identities = 25/49 (51%), Positives = 27/49 (55%), Gaps = 4/49 (8%)
Frame = +3
Query: 135 KANKKTRIGGGAGR--KFDANKRTGRG-GGAGFRSN-RSGGVQRGRNRG 269
K N KTR GG GR ++ R GRG GG G S R GG RGR RG
Sbjct: 1332 KRNWKTRGTGGRGRWGRWGRWSRGGRGRGGRGRGSRGRGGGGTRGRGRG 1380
>AY497054-1|AAS45479.1| 1472|Homo sapiens bromodomain and WD repeat
domain containing 3 variant BRWD3-I protein.
Length = 1472
Score = 34.7 bits (76), Expect = 0.35
Identities = 25/49 (51%), Positives = 27/49 (55%), Gaps = 4/49 (8%)
Frame = +3
Query: 135 KANKKTRIGGGAGR--KFDANKRTGRG-GGAGFRSN-RSGGVQRGRNRG 269
K N KTR GG GR ++ R GRG GG G S R GG RGR RG
Sbjct: 1332 KRNWKTRGTGGRGRWGRWGRWSRGGRGRGGRGRGSRGRGGGGTRGRGRG 1380
>AY497053-1|AAS45478.1| 1472|Homo sapiens bromodomain and WD repeat
domain containing 3 variant BRWD3-H protein.
Length = 1472
Score = 34.7 bits (76), Expect = 0.35
Identities = 25/49 (51%), Positives = 27/49 (55%), Gaps = 4/49 (8%)
Frame = +3
Query: 135 KANKKTRIGGGAGR--KFDANKRTGRG-GGAGFRSN-RSGGVQRGRNRG 269
K N KTR GG GR ++ R GRG GG G S R GG RGR RG
Sbjct: 1332 KRNWKTRGTGGRGRWGRWGRWSRGGRGRGGRGRGSRGRGGGGTRGRGRG 1380
>AY497052-1|AAS45477.1| 1398|Homo sapiens bromodomain and WD repeat
domain containing 3 variant BRWD3-G protein.
Length = 1398
Score = 34.7 bits (76), Expect = 0.35
Identities = 25/49 (51%), Positives = 27/49 (55%), Gaps = 4/49 (8%)
Frame = +3
Query: 135 KANKKTRIGGGAGR--KFDANKRTGRG-GGAGFRSN-RSGGVQRGRNRG 269
K N KTR GG GR ++ R GRG GG G S R GG RGR RG
Sbjct: 1258 KRNWKTRGTGGRGRWGRWGRWSRGGRGRGGRGRGSRGRGGGGTRGRGRG 1306
>AY497051-1|AAS45476.1| 1398|Homo sapiens bromodomain and WD repeat
domain containing 3 variant BRWD3-F protein.
Length = 1398
Score = 34.7 bits (76), Expect = 0.35
Identities = 25/49 (51%), Positives = 27/49 (55%), Gaps = 4/49 (8%)
Frame = +3
Query: 135 KANKKTRIGGGAGR--KFDANKRTGRG-GGAGFRSN-RSGGVQRGRNRG 269
K N KTR GG GR ++ R GRG GG G S R GG RGR RG
Sbjct: 1258 KRNWKTRGTGGRGRWGRWGRWSRGGRGRGGRGRGSRGRGGGGTRGRGRG 1306
>AY497050-1|AAS45475.1| 1398|Homo sapiens bromodomain and WD repeat
domain containing 3 variant BRWD3-E protein.
Length = 1398
Score = 34.7 bits (76), Expect = 0.35
Identities = 25/49 (51%), Positives = 27/49 (55%), Gaps = 4/49 (8%)
Frame = +3
Query: 135 KANKKTRIGGGAGR--KFDANKRTGRG-GGAGFRSN-RSGGVQRGRNRG 269
K N KTR GG GR ++ R GRG GG G S R GG RGR RG
Sbjct: 1258 KRNWKTRGTGGRGRWGRWGRWSRGGRGRGGRGRGSRGRGGGGTRGRGRG 1306
>AY497049-1|AAS45474.1| 1398|Homo sapiens bromodomain and WD repeat
domain containing 3 variant BRWD3-D protein.
Length = 1398
Score = 34.7 bits (76), Expect = 0.35
Identities = 25/49 (51%), Positives = 27/49 (55%), Gaps = 4/49 (8%)
Frame = +3
Query: 135 KANKKTRIGGGAGR--KFDANKRTGRG-GGAGFRSN-RSGGVQRGRNRG 269
K N KTR GG GR ++ R GRG GG G S R GG RGR RG
Sbjct: 1258 KRNWKTRGTGGRGRWGRWGRWSRGGRGRGGRGRGSRGRGGGGTRGRGRG 1306
>AY497048-1|AAS45473.1| 1398|Homo sapiens bromodomain and WD repeat
domain containing 3 variant BRWD3-C protein.
Length = 1398
Score = 34.7 bits (76), Expect = 0.35
Identities = 25/49 (51%), Positives = 27/49 (55%), Gaps = 4/49 (8%)
Frame = +3
Query: 135 KANKKTRIGGGAGR--KFDANKRTGRG-GGAGFRSN-RSGGVQRGRNRG 269
K N KTR GG GR ++ R GRG GG G S R GG RGR RG
Sbjct: 1258 KRNWKTRGTGGRGRWGRWGRWSRGGRGRGGRGRGSRGRGGGGTRGRGRG 1306
>AY497047-1|AAS45472.1| 1631|Homo sapiens bromodomain and WD repeat
domain containing 3 variant BRWD3-B protein.
Length = 1631
Score = 34.7 bits (76), Expect = 0.35
Identities = 25/49 (51%), Positives = 27/49 (55%), Gaps = 4/49 (8%)
Frame = +3
Query: 135 KANKKTRIGGGAGR--KFDANKRTGRG-GGAGFRSN-RSGGVQRGRNRG 269
K N KTR GG GR ++ R GRG GG G S R GG RGR RG
Sbjct: 1491 KRNWKTRGTGGRGRWGRWGRWSRGGRGRGGRGRGSRGRGGGGTRGRGRG 1539
>AY497046-1|AAS45471.1| 1802|Homo sapiens bromodomain and WD repeat
domain containing 3 variant BRWD3-A protein.
Length = 1802
Score = 34.7 bits (76), Expect = 0.35
Identities = 25/49 (51%), Positives = 27/49 (55%), Gaps = 4/49 (8%)
Frame = +3
Query: 135 KANKKTRIGGGAGR--KFDANKRTGRG-GGAGFRSN-RSGGVQRGRNRG 269
K N KTR GG GR ++ R GRG GG G S R GG RGR RG
Sbjct: 1662 KRNWKTRGTGGRGRWGRWGRWSRGGRGRGGRGRGSRGRGGGGTRGRGRG 1710
>AL669934-1|CAI95405.1| 1802|Homo sapiens bromodomain and WD repeat
domain containing 3 protein.
Length = 1802
Score = 34.7 bits (76), Expect = 0.35
Identities = 25/49 (51%), Positives = 27/49 (55%), Gaps = 4/49 (8%)
Frame = +3
Query: 135 KANKKTRIGGGAGR--KFDANKRTGRG-GGAGFRSN-RSGGVQRGRNRG 269
K N KTR GG GR ++ R GRG GG G S R GG RGR RG
Sbjct: 1662 KRNWKTRGTGGRGRWGRWGRWSRGGRGRGGRGRGSRGRGGGGTRGRGRG 1710
>AL590031-1|CAI39936.2| 1802|Homo sapiens bromodomain and WD repeat
domain containing 3 protein.
Length = 1802
Score = 34.7 bits (76), Expect = 0.35
Identities = 25/49 (51%), Positives = 27/49 (55%), Gaps = 4/49 (8%)
Frame = +3
Query: 135 KANKKTRIGGGAGR--KFDANKRTGRG-GGAGFRSN-RSGGVQRGRNRG 269
K N KTR GG GR ++ R GRG GG G S R GG RGR RG
Sbjct: 1662 KRNWKTRGTGGRGRWGRWGRWSRGGRGRGGRGRGSRGRGGGGTRGRGRG 1710
>AL512504-2|CAI95143.1| 1802|Homo sapiens bromodomain and WD repeat
domain containing 3 protein.
Length = 1802
Score = 34.7 bits (76), Expect = 0.35
Identities = 25/49 (51%), Positives = 27/49 (55%), Gaps = 4/49 (8%)
Frame = +3
Query: 135 KANKKTRIGGGAGR--KFDANKRTGRG-GGAGFRSN-RSGGVQRGRNRG 269
K N KTR GG GR ++ R GRG GG G S R GG RGR RG
Sbjct: 1662 KRNWKTRGTGGRGRWGRWGRWSRGGRGRGGRGRGSRGRGGGGTRGRGRG 1710
>AF283508-1|AAF91470.1| 362|Homo sapiens cell death regulator aven
protein.
Length = 362
Score = 34.7 bits (76), Expect = 0.35
Identities = 18/37 (48%), Positives = 18/37 (48%)
Frame = +3
Query: 159 GGGAGRKFDANKRTGRGGGAGFRSNRSGGVQRGRNRG 269
GGG G D R GRG G GFR R G G RG
Sbjct: 38 GGGGGGGGDGGGRRGRGRGRGFRGARGGRGGGGAPRG 74
>BC000272-1|AAH00272.1| 737|Homo sapiens DEAD (Asp-Glu-Ala-Asp) box
polypeptide 50 protein.
Length = 737
Score = 34.3 bits (75), Expect = 0.47
Identities = 20/65 (30%), Positives = 31/65 (47%)
Frame = +3
Query: 105 QIEMALDDIIKANKKTRIGGGAGRKFDANKRTGRGGGAGFRSNRSGGVQRGRNRGGITKS 284
+IE D +N + R G +GR + + GR GG R +R G + G + G +S
Sbjct: 663 EIEEYYDGNTSSNSRQRSGWSSGRSGRSGRSGGRSGGRSGRQSRQGS-RSGSRQDGRRRS 721
Query: 285 TNYSR 299
N +R
Sbjct: 722 GNRNR 726
>BC000210-1|AAH00210.1| 467|Homo sapiens DDX50 protein protein.
Length = 467
Score = 34.3 bits (75), Expect = 0.47
Identities = 20/65 (30%), Positives = 31/65 (47%)
Frame = +3
Query: 105 QIEMALDDIIKANKKTRIGGGAGRKFDANKRTGRGGGAGFRSNRSGGVQRGRNRGGITKS 284
+IE D +N + R G +GR + + GR GG R +R G + G + G +S
Sbjct: 393 EIEEYYDGNTSSNSRQRSGWSSGRSGRSGRSGGRSGGRSGRQSRQGS-RSGSRQDGRRRS 451
Query: 285 TNYSR 299
N +R
Sbjct: 452 GNRNR 456
>AL359844-2|CAH72376.1| 737|Homo sapiens DEAD (Asp-Glu-Ala-Asp) box
polypeptide 50 protein.
Length = 737
Score = 34.3 bits (75), Expect = 0.47
Identities = 20/65 (30%), Positives = 31/65 (47%)
Frame = +3
Query: 105 QIEMALDDIIKANKKTRIGGGAGRKFDANKRTGRGGGAGFRSNRSGGVQRGRNRGGITKS 284
+IE D +N + R G +GR + + GR GG R +R G + G + G +S
Sbjct: 663 EIEEYYDGNTSSNSRQRSGWSSGRSGRSGRSGGRSGGRSGRQSRQGS-RSGSRQDGRRRS 721
Query: 285 TNYSR 299
N +R
Sbjct: 722 GNRNR 726
>AL137423-1|CAB70733.1| 399|Homo sapiens hypothetical protein
protein.
Length = 399
Score = 34.3 bits (75), Expect = 0.47
Identities = 20/65 (30%), Positives = 31/65 (47%)
Frame = +3
Query: 105 QIEMALDDIIKANKKTRIGGGAGRKFDANKRTGRGGGAGFRSNRSGGVQRGRNRGGITKS 284
+IE D +N + R G +GR + + GR GG R +R G + G + G +S
Sbjct: 325 EIEEYYDGNTSSNSRQRSGWSSGRSGRSGRSGGRSGGRSGRQSRQGS-RSGSRQDGRRRS 383
Query: 285 TNYSR 299
N +R
Sbjct: 384 GNRNR 388
>AF334103-1|AAK29402.1| 737|Homo sapiens nucleolar protein GU2
protein.
Length = 737
Score = 34.3 bits (75), Expect = 0.47
Identities = 20/65 (30%), Positives = 31/65 (47%)
Frame = +3
Query: 105 QIEMALDDIIKANKKTRIGGGAGRKFDANKRTGRGGGAGFRSNRSGGVQRGRNRGGITKS 284
+IE D +N + R G +GR + + GR GG R +R G + G + G +S
Sbjct: 663 EIEEYYDGNTSSNSRQRSGWSSGRSGRSGRSGGRSGGRSGRQSRQGS-RSGSRQDGRRRS 721
Query: 285 TNYSR 299
N +R
Sbjct: 722 GNRNR 726
>CR533502-1|CAG38533.1| 318|Homo sapiens DKFZp761B1514 protein.
Length = 318
Score = 33.1 bits (72), Expect = 1.1
Identities = 28/73 (38%), Positives = 40/73 (54%), Gaps = 3/73 (4%)
Frame = +3
Query: 99 VDQIEMALDDIIKANKKTRIGGGAGRKFD-ANKRTGRGGGA-GFRSNRSGGVQRGRNRG- 269
+D+I+M+LDDIIK N+K G + F N+R + GA FR G+Q +N G
Sbjct: 27 LDKIDMSLDDIIKLNRKE----GKKQNFPRLNRRLLQQSGAQQFRMRVRWGIQ--QNSGF 80
Query: 270 GITKSTNYSRVIP 308
G T + RV+P
Sbjct: 81 GKTSLNHRGRVMP 93
>BC035006-1|AAH35006.1| 318|Homo sapiens forty-two-three domain
containing 1 protein.
Length = 318
Score = 33.1 bits (72), Expect = 1.1
Identities = 28/73 (38%), Positives = 40/73 (54%), Gaps = 3/73 (4%)
Frame = +3
Query: 99 VDQIEMALDDIIKANKKTRIGGGAGRKFD-ANKRTGRGGGA-GFRSNRSGGVQRGRNRG- 269
+D+I+M+LDDIIK N+K G + F N+R + GA FR G+Q +N G
Sbjct: 27 LDKIDMSLDDIIKLNRKE----GKKQNFPRLNRRLLQQSGAQQFRMRVRWGIQ--QNSGF 80
Query: 270 GITKSTNYSRVIP 308
G T + RV+P
Sbjct: 81 GKTSLNHRGRVMP 93
>AK027672-1|BAB55284.1| 318|Homo sapiens protein ( Homo sapiens
cDNA FLJ14766 fis, clone NT2RP3004041. ).
Length = 318
Score = 33.1 bits (72), Expect = 1.1
Identities = 28/73 (38%), Positives = 40/73 (54%), Gaps = 3/73 (4%)
Frame = +3
Query: 99 VDQIEMALDDIIKANKKTRIGGGAGRKFD-ANKRTGRGGGA-GFRSNRSGGVQRGRNRG- 269
+D+I+M+LDDIIK N+K G + F N+R + GA FR G+Q +N G
Sbjct: 27 LDKIDMSLDDIIKLNRKE----GKKQNFPRLNRRLLQQSGAQQFRMRVRWGIQ--QNSGF 80
Query: 270 GITKSTNYSRVIP 308
G T + RV+P
Sbjct: 81 GKTSLNHRGRVMP 93
>BC039734-1|AAH39734.1| 318|Homo sapiens forty-two-three domain
containing 1 protein.
Length = 318
Score = 32.7 bits (71), Expect = 1.4
Identities = 28/73 (38%), Positives = 39/73 (53%), Gaps = 3/73 (4%)
Frame = +3
Query: 99 VDQIEMALDDIIKANKKTRIGGGAGRKFD-ANKRTGRGGGA-GFRSNRSGGVQRGRNRG- 269
+D+I+M+LDDIIK N+K G + F N+R + GA FR G+Q +N G
Sbjct: 27 LDKIDMSLDDIIKLNRKE----GKKQNFPRLNRRLLQQSGAQQFRMRVRWGIQ--QNSGF 80
Query: 270 GITKSTNYSRVIP 308
G T RV+P
Sbjct: 81 GKTSLNRRGRVMP 93
>AJ344094-1|CAC51432.1| 318|Homo sapiens putative 40-2-3 protein
protein.
Length = 318
Score = 32.7 bits (71), Expect = 1.4
Identities = 28/73 (38%), Positives = 39/73 (53%), Gaps = 3/73 (4%)
Frame = +3
Query: 99 VDQIEMALDDIIKANKKTRIGGGAGRKFD-ANKRTGRGGGA-GFRSNRSGGVQRGRNRG- 269
+D+I+M+LDDIIK N+K G + F N+R + GA FR G+Q +N G
Sbjct: 27 LDKIDMSLDDIIKLNRKE----GKKQNFPRLNRRLLQQSGAQQFRMRVRWGIQ--QNSGF 80
Query: 270 GITKSTNYSRVIP 308
G T RV+P
Sbjct: 81 GKTSLNRRGRVMP 93
>X71428-1|CAA50559.1| 525|Homo sapiens FUS gycline rich protein
protein.
Length = 525
Score = 31.9 bits (69), Expect = 2.5
Identities = 14/38 (36%), Positives = 20/38 (52%)
Frame = +3
Query: 159 GGGAGRKFDANKRTGRGGGAGFRSNRSGGVQRGRNRGG 272
GGG+G + ++G GG G+ GG RG + GG
Sbjct: 186 GGGSGGGYGNQDQSGGGGSGGYGQQDRGGRGRGGSGGG 223
Score = 30.3 bits (65), Expect = 7.6
Identities = 15/38 (39%), Positives = 18/38 (47%)
Frame = +3
Query: 159 GGGAGRKFDANKRTGRGGGAGFRSNRSGGVQRGRNRGG 272
GGG R + GRGGG G R G + G N+ G
Sbjct: 228 GGGYNRSSGGYEPRGRGGGRGGRGGMGGSDRGGFNKFG 265
>S75762-1|AAB32714.2| 195|Homo sapiens FUS-CHOP fusion protein
protein.
Length = 195
Score = 31.9 bits (69), Expect = 2.5
Identities = 14/38 (36%), Positives = 20/38 (52%)
Frame = +3
Query: 159 GGGAGRKFDANKRTGRGGGAGFRSNRSGGVQRGRNRGG 272
GGG+G + ++G GG G+ GG RG + GG
Sbjct: 103 GGGSGGGYGNQDQSGGGGSGGYGQQDRGGRGRGGSGGG 140
>S62140-1|AAB27102.1| 526|Homo sapiens TLS protein.
Length = 526
Score = 31.9 bits (69), Expect = 2.5
Identities = 14/38 (36%), Positives = 20/38 (52%)
Frame = +3
Query: 159 GGGAGRKFDANKRTGRGGGAGFRSNRSGGVQRGRNRGG 272
GGG+G + ++G GG G+ GG RG + GG
Sbjct: 187 GGGSGGGYGNQDQSGGGGSGGYGQQDRGGRGRGGSGGG 224
Score = 30.3 bits (65), Expect = 7.6
Identities = 15/38 (39%), Positives = 18/38 (47%)
Frame = +3
Query: 159 GGGAGRKFDANKRTGRGGGAGFRSNRSGGVQRGRNRGG 272
GGG R + GRGGG G R G + G N+ G
Sbjct: 229 GGGYNRSSGGYEPRGRGGGRGGRGGMGGSDRGGFNKFG 266
>CR456747-1|CAG33028.1| 526|Homo sapiens FUS protein.
Length = 526
Score = 31.9 bits (69), Expect = 2.5
Identities = 14/38 (36%), Positives = 20/38 (52%)
Frame = +3
Query: 159 GGGAGRKFDANKRTGRGGGAGFRSNRSGGVQRGRNRGG 272
GGG+G + ++G GG G+ GG RG + GG
Sbjct: 187 GGGSGGGYGNQDQSGGGGSGGYGQQDRGGRGRGGSGGG 224
Score = 30.3 bits (65), Expect = 7.6
Identities = 15/38 (39%), Positives = 18/38 (47%)
Frame = +3
Query: 159 GGGAGRKFDANKRTGRGGGAGFRSNRSGGVQRGRNRGG 272
GGG R + GRGGG G R G + G N+ G
Sbjct: 229 GGGYNRSSGGYEPRGRGGGRGGRGGMGGSDRGGFNKFG 266
>BT007131-1|AAP35795.1| 526|Homo sapiens fusion, derived from
t(12;16) malignant liposarcoma protein.
Length = 526
Score = 31.9 bits (69), Expect = 2.5
Identities = 14/38 (36%), Positives = 20/38 (52%)
Frame = +3
Query: 159 GGGAGRKFDANKRTGRGGGAGFRSNRSGGVQRGRNRGG 272
GGG+G + ++G GG G+ GG RG + GG
Sbjct: 187 GGGSGGGYGNQDQSGGGGSGGYGQQDRGGRGRGGSGGG 224
Score = 30.3 bits (65), Expect = 7.6
Identities = 15/38 (39%), Positives = 18/38 (47%)
Frame = +3
Query: 159 GGGAGRKFDANKRTGRGGGAGFRSNRSGGVQRGRNRGG 272
GGG R + GRGGG G R G + G N+ G
Sbjct: 229 GGGYNRSSGGYEPRGRGGGRGGRGGMGGSDRGGFNKFG 266
>BC026062-1|AAH26062.1| 526|Homo sapiens fusion (involved in
t(12;16) in malignant liposarcoma) protein.
Length = 526
Score = 31.9 bits (69), Expect = 2.5
Identities = 14/38 (36%), Positives = 20/38 (52%)
Frame = +3
Query: 159 GGGAGRKFDANKRTGRGGGAGFRSNRSGGVQRGRNRGG 272
GGG+G + ++G GG G+ GG RG + GG
Sbjct: 187 GGGSGGGYGNQDQSGGGGSGGYGQQDRGGRGRGGSGGG 224
Score = 30.3 bits (65), Expect = 7.6
Identities = 15/38 (39%), Positives = 18/38 (47%)
Frame = +3
Query: 159 GGGAGRKFDANKRTGRGGGAGFRSNRSGGVQRGRNRGG 272
GGG R + GRGGG G R G + G N+ G
Sbjct: 229 GGGYNRSSGGYEPRGRGGGRGGRGGMGGSDRGGFNKFG 266
>BC002459-1|AAH02459.1| 526|Homo sapiens fusion (involved in
t(12;16) in malignant liposarcoma) protein.
Length = 526
Score = 31.9 bits (69), Expect = 2.5
Identities = 14/38 (36%), Positives = 20/38 (52%)
Frame = +3
Query: 159 GGGAGRKFDANKRTGRGGGAGFRSNRSGGVQRGRNRGG 272
GGG+G + ++G GG G+ GG RG + GG
Sbjct: 187 GGGSGGGYGNQDQSGGGGSGGYGQQDRGGRGRGGSGGG 224
Score = 30.3 bits (65), Expect = 7.6
Identities = 15/38 (39%), Positives = 18/38 (47%)
Frame = +3
Query: 159 GGGAGRKFDANKRTGRGGGAGFRSNRSGGVQRGRNRGG 272
GGG R + GRGGG G R G + G N+ G
Sbjct: 229 GGGYNRSSGGYEPRGRGGGRGGRGGMGGSDRGGFNKFG 266
>BC000402-1|AAH00402.1| 526|Homo sapiens fusion (involved in
t(12;16) in malignant liposarcoma) protein.
Length = 526
Score = 31.9 bits (69), Expect = 2.5
Identities = 14/38 (36%), Positives = 20/38 (52%)
Frame = +3
Query: 159 GGGAGRKFDANKRTGRGGGAGFRSNRSGGVQRGRNRGG 272
GGG+G + ++G GG G+ GG RG + GG
Sbjct: 187 GGGSGGGYGNQDQSGGGGSGGYGQQDRGGRGRGGSGGG 224
Score = 30.3 bits (65), Expect = 7.6
Identities = 15/38 (39%), Positives = 18/38 (47%)
Frame = +3
Query: 159 GGGAGRKFDANKRTGRGGGAGFRSNRSGGVQRGRNRGG 272
GGG R + GRGGG G R G + G N+ G
Sbjct: 229 GGGYNRSSGGYEPRGRGGGRGGRGGMGGSDRGGFNKFG 266
>AF071213-2|AAC35284.1| 525|Homo sapiens FUS/TLS protein protein.
Length = 525
Score = 31.9 bits (69), Expect = 2.5
Identities = 14/38 (36%), Positives = 20/38 (52%)
Frame = +3
Query: 159 GGGAGRKFDANKRTGRGGGAGFRSNRSGGVQRGRNRGG 272
GGG+G + ++G GG G+ GG RG + GG
Sbjct: 186 GGGSGGGYGNQDQSGGGGSGGYGQQDRGGRGRGGSGGG 223
Score = 30.3 bits (65), Expect = 7.6
Identities = 15/38 (39%), Positives = 18/38 (47%)
Frame = +3
Query: 159 GGGAGRKFDANKRTGRGGGAGFRSNRSGGVQRGRNRGG 272
GGG R + GRGGG G R G + G N+ G
Sbjct: 228 GGGYNRSSGGYEPRGRGGGRGGRGGMGGSDRGGFNKFG 265
>AF071213-1|AAC35285.1| 526|Homo sapiens FUS/TLS protein protein.
Length = 526
Score = 31.9 bits (69), Expect = 2.5
Identities = 14/38 (36%), Positives = 20/38 (52%)
Frame = +3
Query: 159 GGGAGRKFDANKRTGRGGGAGFRSNRSGGVQRGRNRGG 272
GGG+G + ++G GG G+ GG RG + GG
Sbjct: 187 GGGSGGGYGNQDQSGGGGSGGYGQQDRGGRGRGGSGGG 224
Score = 30.3 bits (65), Expect = 7.6
Identities = 15/38 (39%), Positives = 18/38 (47%)
Frame = +3
Query: 159 GGGAGRKFDANKRTGRGGGAGFRSNRSGGVQRGRNRGG 272
GGG R + GRGGG G R G + G N+ G
Sbjct: 229 GGGYNRSSGGYEPRGRGGGRGGRGGMGGSDRGGFNKFG 266
>X98893-1|CAA67398.1| 589|Homo sapiens hTAFII68 protein.
Length = 589
Score = 31.1 bits (67), Expect = 4.3
Identities = 15/38 (39%), Positives = 20/38 (52%)
Frame = +3
Query: 159 GGGAGRKFDANKRTGRGGGAGFRSNRSGGVQRGRNRGG 272
GG G + RGGG+G+ +RSGG R+ GG
Sbjct: 517 GGYGGDRSRGGYGGDRGGGSGYGGDRSGGYGGDRSGGG 554
>U51334-1|AAC50932.1| 592|Homo sapiens putative RNA binding protein
RBP56 protein.
Length = 592
Score = 31.1 bits (67), Expect = 4.3
Identities = 15/38 (39%), Positives = 20/38 (52%)
Frame = +3
Query: 159 GGGAGRKFDANKRTGRGGGAGFRSNRSGGVQRGRNRGG 272
GG G + RGGG+G+ +RSGG R+ GG
Sbjct: 520 GGYGGDRSRGGYGGDRGGGSGYGGDRSGGYGGDRSGGG 557
>U36561-1|AAA79948.1| 528|Homo sapiens fus-like protein protein.
Length = 528
Score = 31.1 bits (67), Expect = 4.3
Identities = 15/38 (39%), Positives = 20/38 (52%)
Frame = +3
Query: 159 GGGAGRKFDANKRTGRGGGAGFRSNRSGGVQRGRNRGG 272
G G G + ++G GGG G+ GG RGR+ GG
Sbjct: 191 GSGGGGGYGNQDQSG-GGGGGYGQQDRGGRGRGRSSGG 227
Score = 31.1 bits (67), Expect = 4.3
Identities = 18/42 (42%), Positives = 22/42 (52%), Gaps = 4/42 (9%)
Frame = +3
Query: 159 GGGAGRKFDANKRTGR----GGGAGFRSNRSGGVQRGRNRGG 272
GGG G++ + GR GGG+G NRS G R RGG
Sbjct: 208 GGGYGQQDRGGRGRGRSSGGGGGSGGGYNRSSGGYEPRGRGG 249
Score = 30.3 bits (65), Expect = 7.6
Identities = 15/38 (39%), Positives = 18/38 (47%)
Frame = +3
Query: 159 GGGAGRKFDANKRTGRGGGAGFRSNRSGGVQRGRNRGG 272
GGG R + GRGGG G R G + G N+ G
Sbjct: 232 GGGYNRSSGGYEPRGRGGGRGGRGGMGGSDRGGFNKFG 269
>BC046099-1|AAH46099.2| 592|Homo sapiens TAF15 RNA polymerase II,
TATA box binding protein (TBP)-associated factor, 68kD
protein.
Length = 592
Score = 31.1 bits (67), Expect = 4.3
Identities = 15/38 (39%), Positives = 20/38 (52%)
Frame = +3
Query: 159 GGGAGRKFDANKRTGRGGGAGFRSNRSGGVQRGRNRGG 272
GG G + RGGG+G+ +RSGG R+ GG
Sbjct: 520 GGYGGDRSRGGYGGDRGGGSGYGGDRSGGYGGDRSGGG 557
>AY197697-1|AAO13485.1| 589|Homo sapiens TAF15 RNA polymerase II,
TATA box binding protein (TBP)-associated factor, 68kD
protein.
Length = 589
Score = 31.1 bits (67), Expect = 4.3
Identities = 15/38 (39%), Positives = 20/38 (52%)
Frame = +3
Query: 159 GGGAGRKFDANKRTGRGGGAGFRSNRSGGVQRGRNRGG 272
GG G + RGGG+G+ +RSGG R+ GG
Sbjct: 517 GGYGGDRSRGGYGGDRGGGSGYGGDRSGGYGGDRSGGG 554
>AB010067-2|BAA33812.1| 589|Homo sapiens RBP56/hTAFII68 protein.
Length = 589
Score = 31.1 bits (67), Expect = 4.3
Identities = 15/38 (39%), Positives = 20/38 (52%)
Frame = +3
Query: 159 GGGAGRKFDANKRTGRGGGAGFRSNRSGGVQRGRNRGG 272
GG G + RGGG+G+ +RSGG R+ GG
Sbjct: 517 GGYGGDRSRGGYGGDRGGGSGYGGDRSGGYGGDRSGGG 554
>AB010067-1|BAA33811.1| 592|Homo sapiens RBP56/hTAFII68 protein.
Length = 592
Score = 31.1 bits (67), Expect = 4.3
Identities = 15/38 (39%), Positives = 20/38 (52%)
Frame = +3
Query: 159 GGGAGRKFDANKRTGRGGGAGFRSNRSGGVQRGRNRGG 272
GG G + RGGG+G+ +RSGG R+ GG
Sbjct: 520 GGYGGDRSRGGYGGDRGGGSGYGGDRSGGYGGDRSGGG 557
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 105,233,672
Number of Sequences: 237096
Number of extensions: 2218653
Number of successful extensions: 5771
Number of sequences better than 10.0: 63
Number of HSP's better than 10.0 without gapping: 4205
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5439
length of database: 76,859,062
effective HSP length: 88
effective length of database: 55,994,614
effective search space used: 8847149012
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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