Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmmt25b07
         (677 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

03_06_0675 + 35455968-35455970,35456314-35456379,35456513-354565...   239   1e-63
11_06_0072 + 19813912-19815234,19815314-19815661,19816002-19816229     31   0.64 
01_01_1202 - 9681836-9683146                                           29   2.6  
08_02_0187 - 13978194-13979093,13980332-13980679                       29   3.4  
02_01_0369 + 2649178-2655291,2655773-2656601,2656737-2657425,265...    29   3.4  

>03_06_0675 +
           35455968-35455970,35456314-35456379,35456513-35456565,
           35457142-35457169,35457837-35457911,35458020-35458124,
           35458278-35458367,35458454-35458543
          Length = 169

 Score =  239 bits (585), Expect = 1e-63
 Identities = 112/168 (66%), Positives = 140/168 (83%)
 Frame = +1

Query: 64  MAATLKPYLTAVRHTLTAAMCLEHFSSQVVEKYTKPEVEVRTSKELLLNPVVISRNSNEK 243
           MA TL+ YLT +R+TL AAMCL++F  Q VE++ KPEVE++TS ELLLNPV+I RN  EK
Sbjct: 1   MANTLRLYLTCIRNTLEAAMCLQNFPCQEVERHNKPEVELKTSPELLLNPVLICRNEAEK 60

Query: 244 VLIESSINSIRVSIMIKQADEIEKILCKKFMRFMMMRAENFIVLRRKPVDGYHISFLITN 423
            LIE+SINSIR+S+ +KQADE+E IL KKF+RF+ MRAE F VLRRKPV GY ISFLITN
Sbjct: 61  CLIETSINSIRISMKVKQADELENILAKKFLRFLSMRAEAFQVLRRKPVQGYDISFLITN 120

Query: 424 FHTEQMYKHKLVDFVIYFMEEIDKEISEMKLAVNARARICSEEFLKRF 567
           +H E M+KHKL+DF++ FME+IDKEISE+KL+VN R R+ + EFLK+F
Sbjct: 121 YHCEDMHKHKLIDFIVQFMEDIDKEISELKLSVNTRGRLVATEFLKQF 168


>11_06_0072 + 19813912-19815234,19815314-19815661,19816002-19816229
          Length = 632

 Score = 31.5 bits (68), Expect = 0.64
 Identities = 16/67 (23%), Positives = 34/67 (50%)
 Frame = +1

Query: 196 ELLLNPVVISRNSNEKVLIESSINSIRVSIMIKQADEIEKILCKKFMRFMMMRAENFIVL 375
           +LLLNP++ S+    KVL+ S   ++  ++  ++  ++E +    F+      A +  V+
Sbjct: 309 DLLLNPLLASQKGGSKVLVTSRSKTLPAALFCEEVIDLENMKDNDFLALFKHYAFSGAVI 368

Query: 376 RRKPVDG 396
           R   + G
Sbjct: 369 RDLQLHG 375


>01_01_1202 - 9681836-9683146
          Length = 436

 Score = 29.5 bits (63), Expect = 2.6
 Identities = 13/33 (39%), Positives = 20/33 (60%)
 Frame = -1

Query: 440 ICSVWKLVIKKLIWYPSTGFLLNTMKFSALIIM 342
           + +V   V+  L +Y  TGFL N M+FSA  ++
Sbjct: 62  LVAVVTFVLVALYYYRCTGFLKNYMRFSAFFVL 94


>08_02_0187 - 13978194-13979093,13980332-13980679
          Length = 415

 Score = 29.1 bits (62), Expect = 3.4
 Identities = 11/37 (29%), Positives = 21/37 (56%)
 Frame = +1

Query: 229 NSNEKVLIESSINSIRVSIMIKQADEIEKILCKKFMR 339
           N  + VL+++ +NS  V+  +K AD +      KF++
Sbjct: 294 NDRDSVLLDTKVNSASVTATVKDADPLAVYAISKFLQ 330


>02_01_0369 + 2649178-2655291,2655773-2656601,2656737-2657425,
            2657523-2657649,2657731-2657812,2658172-2658196
          Length = 2621

 Score = 29.1 bits (62), Expect = 3.4
 Identities = 15/48 (31%), Positives = 26/48 (54%), Gaps = 1/48 (2%)
 Frame = +1

Query: 103  HTLTAAM-CLEHFSSQVVEKYTKPEVEVRTSKELLLNPVVISRNSNEK 243
            H LT  + C+E   +  +E++     E+R SK  L    +I ++S+EK
Sbjct: 1154 HILTTLLPCIEEGVASYIEEFENMAEEIRLSKICLQESNIIGQSSSEK 1201


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,999,413
Number of Sequences: 37544
Number of extensions: 255707
Number of successful extensions: 510
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 502
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 510
length of database: 14,793,348
effective HSP length: 79
effective length of database: 11,827,372
effective search space used: 1726796312
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)