Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmmt25b07
         (677 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY113475-1|AAM29480.1|  168|Drosophila melanogaster RE43724p pro...   287   1e-77
AE014134-1056|AAF52346.1|  168|Drosophila melanogaster CG5972-PA...   287   1e-77

>AY113475-1|AAM29480.1|  168|Drosophila melanogaster RE43724p
           protein.
          Length = 168

 Score =  287 bits (703), Expect = 1e-77
 Identities = 136/168 (80%), Positives = 153/168 (91%)
 Frame = +1

Query: 64  MAATLKPYLTAVRHTLTAAMCLEHFSSQVVEKYTKPEVEVRTSKELLLNPVVISRNSNEK 243
           MAATLKPYLTAVRH+LTAAMCL+ F SQVVE++ KPEVE+ +SKEL+L PVV+SRN  EK
Sbjct: 1   MAATLKPYLTAVRHSLTAAMCLQDFPSQVVERHNKPEVEICSSKELVLTPVVVSRNEREK 60

Query: 244 VLIESSINSIRVSIMIKQADEIEKILCKKFMRFMMMRAENFIVLRRKPVDGYHISFLITN 423
           VLIE SINS+RVSI +KQADEIE+ILC KF RFMM RAE+F++LRRKP++GY ISFLITN
Sbjct: 61  VLIEPSINSVRVSIAVKQADEIERILCHKFTRFMMRRAESFVILRRKPIEGYDISFLITN 120

Query: 424 FHTEQMYKHKLVDFVIYFMEEIDKEISEMKLAVNARARICSEEFLKRF 567
           FHTEQMYKHKLVDFVI FMEEIDKEISEMKLAVNARAR C+EEFLKRF
Sbjct: 121 FHTEQMYKHKLVDFVISFMEEIDKEISEMKLAVNARARTCAEEFLKRF 168


>AE014134-1056|AAF52346.1|  168|Drosophila melanogaster CG5972-PA
           protein.
          Length = 168

 Score =  287 bits (703), Expect = 1e-77
 Identities = 136/168 (80%), Positives = 153/168 (91%)
 Frame = +1

Query: 64  MAATLKPYLTAVRHTLTAAMCLEHFSSQVVEKYTKPEVEVRTSKELLLNPVVISRNSNEK 243
           MAATLKPYLTAVRH+LTAAMCL+ F SQVVE++ KPEVE+ +SKEL+L PVV+SRN  EK
Sbjct: 1   MAATLKPYLTAVRHSLTAAMCLQDFPSQVVERHNKPEVEICSSKELVLTPVVVSRNEREK 60

Query: 244 VLIESSINSIRVSIMIKQADEIEKILCKKFMRFMMMRAENFIVLRRKPVDGYHISFLITN 423
           VLIE SINS+RVSI +KQADEIE+ILC KF RFMM RAE+F++LRRKP++GY ISFLITN
Sbjct: 61  VLIEPSINSVRVSIAVKQADEIERILCHKFTRFMMRRAESFVILRRKPIEGYDISFLITN 120

Query: 424 FHTEQMYKHKLVDFVIYFMEEIDKEISEMKLAVNARARICSEEFLKRF 567
           FHTEQMYKHKLVDFVI FMEEIDKEISEMKLAVNARAR C+EEFLKRF
Sbjct: 121 FHTEQMYKHKLVDFVISFMEEIDKEISEMKLAVNARARTCAEEFLKRF 168


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 25,980,068
Number of Sequences: 53049
Number of extensions: 466528
Number of successful extensions: 1331
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 1256
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1331
length of database: 24,988,368
effective HSP length: 82
effective length of database: 20,638,350
effective search space used: 2951284050
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)