Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmmt25b01
(534 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U80447-10|AAB37814.1| 477|Caenorhabditis elegans Hypothetical p... 47 7e-06
Z70306-4|CAH04694.1| 363|Caenorhabditis elegans Hypothetical pr... 33 0.098
Z67880-2|CAA91792.2| 505|Caenorhabditis elegans Hypothetical pr... 33 0.13
U42437-4|AAA83498.2| 349|Caenorhabditis elegans Hypothetical pr... 33 0.13
Z70306-5|CAO82011.1| 337|Caenorhabditis elegans Hypothetical pr... 32 0.23
U67949-1|AAL06028.2| 633|Caenorhabditis elegans Hypothetical pr... 31 0.52
AL032648-3|CAA21695.1| 319|Caenorhabditis elegans Hypothetical ... 30 0.91
U97009-2|AAC69029.3| 342|Caenorhabditis elegans Serpentine rece... 29 1.6
Z74027-4|CAA98423.1| 561|Caenorhabditis elegans Hypothetical pr... 29 2.8
Z74027-3|CAA98422.1| 557|Caenorhabditis elegans Hypothetical pr... 29 2.8
U88173-13|AAM15573.1| 1225|Caenorhabditis elegans Hypothetical p... 29 2.8
U88173-12|AAK21388.1| 1339|Caenorhabditis elegans Hypothetical p... 29 2.8
Z93779-1|CAB07849.2| 2103|Caenorhabditis elegans Hypothetical pr... 28 4.8
Z78543-7|CAB01757.2| 2103|Caenorhabditis elegans Hypothetical pr... 28 4.8
Z66566-5|CAA91487.2| 2103|Caenorhabditis elegans Hypothetical pr... 28 4.8
Z95559-8|CAB54437.1| 720|Caenorhabditis elegans Hypothetical pr... 27 6.4
Z81017-11|CAC70095.2| 1158|Caenorhabditis elegans Hypothetical p... 27 8.5
Z81017-10|CAE47468.1| 1051|Caenorhabditis elegans Hypothetical p... 27 8.5
Z81017-9|CAD44136.1| 1096|Caenorhabditis elegans Hypothetical pr... 27 8.5
Z81017-8|CAC70094.2| 988|Caenorhabditis elegans Hypothetical pr... 27 8.5
Z81017-7|CAB02673.2| 1040|Caenorhabditis elegans Hypothetical pr... 27 8.5
U39761-1|AAC46934.1| 1040|Caenorhabditis elegans EGL-15 protein. 27 8.5
U13642-4|AAG00043.2| 687|Caenorhabditis elegans Hypothetical pr... 27 8.5
AY288941-1|AAP44084.1| 987|Caenorhabditis elegans EGL-15 protein. 27 8.5
AF039720-1|AAB96694.1| 437|Caenorhabditis elegans Hypothetical ... 27 8.5
AF003136-5|AAK21372.1| 203|Caenorhabditis elegans Hypothetical ... 27 8.5
>U80447-10|AAB37814.1| 477|Caenorhabditis elegans Hypothetical
protein F55F8.9 protein.
Length = 477
Score = 47.2 bits (107), Expect = 7e-06
Identities = 34/123 (27%), Positives = 53/123 (43%), Gaps = 3/123 (2%)
Frame = +2
Query: 11 NVLTAKIVTMVSLFGISMFVGCLPLLISKKFNW--FTKSRDPNLRSSNQXXXXXXXXXXX 184
N K+V M +F +++ VG PL + K T + +
Sbjct: 2 NEAILKLVLMFVMFSLTVIVGLSPLKVLHKLRHEAATAQSSSKHKHVSLVLCLLTCFSGG 61
Query: 185 XXXXTTFMHLLPEVDENIELLQETGEIP-DVPVFLAGLIMCGGFFMMYLVEELVHLYIHA 361
T F+HL PE+ EN+E L D PV L+ C GFF+++ +EE+V + I +
Sbjct: 62 VFLATCFLHLFPELRENLETLDTVHNFRIDYPV--GELLSCLGFFLIFFLEEVVIMIIPS 119
Query: 362 REH 370
H
Sbjct: 120 FAH 122
>Z70306-4|CAH04694.1| 363|Caenorhabditis elegans Hypothetical
protein C06G8.3b protein.
Length = 363
Score = 33.5 bits (73), Expect = 0.098
Identities = 27/112 (24%), Positives = 50/112 (44%), Gaps = 7/112 (6%)
Frame = +2
Query: 197 TTFMHLLPEVDENIELLQETGEIPDVPVFLAGLIMCGGFFMMYLVEELVHLYI----HAR 364
T F+ ++P V + + ET + + + + L +C GFF +YL+EE+ H
Sbjct: 62 TCFLDVMPHVQQTYGEILETYNV-EFRLPMNQLFICVGFFFVYLIEEITAKVFGSGGHGH 120
Query: 365 EHKPS---EKNDAKPFSLRKSISGNDPEINQETKQIENETNSGHSHLVLDSS 511
H P + K R + N + ET I ++ + HS +V +++
Sbjct: 121 SHGPPIPLTVDIKKEKVTRVQLIENGSSSSPETLMIPIDSRTRHSLVVEETA 172
>Z67880-2|CAA91792.2| 505|Caenorhabditis elegans Hypothetical
protein C34E7.1 protein.
Length = 505
Score = 33.1 bits (72), Expect = 0.13
Identities = 18/48 (37%), Positives = 26/48 (54%), Gaps = 4/48 (8%)
Frame = -1
Query: 189 STPPP----NANSPITS*FEDRRFGSRDFVNQLNFFDINNGKHPTNMD 58
+TP P N N+PI+S S DF N+L FFD+ + + P + D
Sbjct: 419 NTPQPQVQINQNTPISSVASTSSASSLDFPNELGFFDMQDPELPVSCD 466
>U42437-4|AAA83498.2| 349|Caenorhabditis elegans Hypothetical
protein F30B5.7 protein.
Length = 349
Score = 33.1 bits (72), Expect = 0.13
Identities = 15/47 (31%), Positives = 26/47 (55%)
Frame = +2
Query: 197 TTFMHLLPEVDENIELLQETGEIPDVPVFLAGLIMCGGFFMMYLVEE 337
T F+ ++P ++E E L ET ++ + + C GFF +Y +EE
Sbjct: 59 TCFLDIIPHINEGYEELMETYDL-NWHFAYPQFVTCCGFFFIYFIEE 104
>Z70306-5|CAO82011.1| 337|Caenorhabditis elegans Hypothetical
protein C06G8.3c protein.
Length = 337
Score = 32.3 bits (70), Expect = 0.23
Identities = 15/48 (31%), Positives = 28/48 (58%)
Frame = +2
Query: 197 TTFMHLLPEVDENIELLQETGEIPDVPVFLAGLIMCGGFFMMYLVEEL 340
T F+ ++P V + + ET + + + + L +C GFF +YL+EE+
Sbjct: 62 TCFLDVMPHVQQTYGEILETYNV-EFRLPMNQLFICVGFFFVYLIEEI 108
>U67949-1|AAL06028.2| 633|Caenorhabditis elegans Hypothetical
protein F55A4.10 protein.
Length = 633
Score = 31.1 bits (67), Expect = 0.52
Identities = 20/52 (38%), Positives = 26/52 (50%), Gaps = 2/52 (3%)
Frame = -1
Query: 288 ARNTGTSGISPVSCNNSMFSSTSGRR--CMNVVAKSTPPPNANSPITS*FED 139
ARN I S + + TSGRR + + K TP PNAN P+ S E+
Sbjct: 387 ARNFPDLSIVIKSDSTNENDKTSGRRRPSVKISKKKTPAPNANLPLKSNLEE 438
>AL032648-3|CAA21695.1| 319|Caenorhabditis elegans Hypothetical
protein Y54G9A.4 protein.
Length = 319
Score = 30.3 bits (65), Expect = 0.91
Identities = 23/64 (35%), Positives = 31/64 (48%), Gaps = 1/64 (1%)
Frame = +2
Query: 203 FMHLLPEVDENIELLQ-ETGEIPDVPVFLAGLIMCGGFFMMYLVEELVHLYIHAREHKPS 379
F+ +LP+ E E +Q +T D P LI GFF +YL EEL + + H S
Sbjct: 63 FLDMLPDCLEAWESVQTDTNYTSDYP--FVQLIALLGFFFVYLTEELSSVICNV-GHGHS 119
Query: 380 EKND 391
ND
Sbjct: 120 HSND 123
>U97009-2|AAC69029.3| 342|Caenorhabditis elegans Serpentine
receptor, class d (delta)protein 33 protein.
Length = 342
Score = 29.5 bits (63), Expect = 1.6
Identities = 12/26 (46%), Positives = 17/26 (65%)
Frame = -3
Query: 487 MTAIGFILNLFGLLVYFWIVPRDALP 410
+T+IGF+LNL L + W PR+ P
Sbjct: 34 LTSIGFLLNLLLLYLIIWKSPRNLTP 59
>Z74027-4|CAA98423.1| 561|Caenorhabditis elegans Hypothetical
protein C13G3.3b protein.
Length = 561
Score = 28.7 bits (61), Expect = 2.8
Identities = 9/45 (20%), Positives = 22/45 (48%)
Frame = -3
Query: 298 YQTGKEHWHIGDLSCLLQQFNVFVHLRQEMHERCSEKYSATKRQQ 164
++ K HW+ + +F+ + Q++ + CS+ Y + Q+
Sbjct: 400 FKNSKSHWNKTIHGLIYNALKMFMEMNQKLFDECSQAYQKDRVQE 444
>Z74027-3|CAA98422.1| 557|Caenorhabditis elegans Hypothetical
protein C13G3.3a protein.
Length = 557
Score = 28.7 bits (61), Expect = 2.8
Identities = 9/45 (20%), Positives = 22/45 (48%)
Frame = -3
Query: 298 YQTGKEHWHIGDLSCLLQQFNVFVHLRQEMHERCSEKYSATKRQQ 164
++ K HW+ + +F+ + Q++ + CS+ Y + Q+
Sbjct: 396 FKNSKSHWNKTIHGLIYNALKMFMEMNQKLFDECSQAYQKDRVQE 440
>U88173-13|AAM15573.1| 1225|Caenorhabditis elegans Hypothetical
protein F46F11.1b protein.
Length = 1225
Score = 28.7 bits (61), Expect = 2.8
Identities = 25/80 (31%), Positives = 35/80 (43%), Gaps = 2/80 (2%)
Frame = -1
Query: 384 FSDGLCSLACMYK*TNSSTKYIMKNPPHIIKPARNTGTSGISPVSCNNSMFSSTSGRR-- 211
FS GL K T++ + P KPA ++ +SG N+S SST GRR
Sbjct: 913 FSPGLYPCFLTEKERIYETRFNLSTNP---KPATSSRSSGRESRDTNDSASSSTEGRRPS 969
Query: 210 CMNVVAKSTPPPNANSPITS 151
VV TP + +T+
Sbjct: 970 IEKVVTVVTPTQLSTPSVTN 989
>U88173-12|AAK21388.1| 1339|Caenorhabditis elegans Hypothetical
protein F46F11.1a protein.
Length = 1339
Score = 28.7 bits (61), Expect = 2.8
Identities = 25/80 (31%), Positives = 35/80 (43%), Gaps = 2/80 (2%)
Frame = -1
Query: 384 FSDGLCSLACMYK*TNSSTKYIMKNPPHIIKPARNTGTSGISPVSCNNSMFSSTSGRR-- 211
FS GL K T++ + P KPA ++ +SG N+S SST GRR
Sbjct: 913 FSPGLYPCFLTEKERIYETRFNLSTNP---KPATSSRSSGRESRDTNDSASSSTEGRRPS 969
Query: 210 CMNVVAKSTPPPNANSPITS 151
VV TP + +T+
Sbjct: 970 IEKVVTVVTPTQLSTPSVTN 989
>Z93779-1|CAB07849.2| 2103|Caenorhabditis elegans Hypothetical
protein T25C12.3 protein.
Length = 2103
Score = 27.9 bits (59), Expect = 4.8
Identities = 12/42 (28%), Positives = 18/42 (42%)
Frame = -1
Query: 264 ISPVSCNNSMFSSTSGRRCMNVVAKSTPPPNANSPITS*FED 139
I V N F T CM ++ PP +P+T+ F +
Sbjct: 272 IDGVDANGFNFRRTGRFSCMQLLTSPAPPTTTQAPVTTCFNN 313
>Z78543-7|CAB01757.2| 2103|Caenorhabditis elegans Hypothetical
protein T25C12.3 protein.
Length = 2103
Score = 27.9 bits (59), Expect = 4.8
Identities = 12/42 (28%), Positives = 18/42 (42%)
Frame = -1
Query: 264 ISPVSCNNSMFSSTSGRRCMNVVAKSTPPPNANSPITS*FED 139
I V N F T CM ++ PP +P+T+ F +
Sbjct: 272 IDGVDANGFNFRRTGRFSCMQLLTSPAPPTTTQAPVTTCFNN 313
>Z66566-5|CAA91487.2| 2103|Caenorhabditis elegans Hypothetical
protein T25C12.3 protein.
Length = 2103
Score = 27.9 bits (59), Expect = 4.8
Identities = 12/42 (28%), Positives = 18/42 (42%)
Frame = -1
Query: 264 ISPVSCNNSMFSSTSGRRCMNVVAKSTPPPNANSPITS*FED 139
I V N F T CM ++ PP +P+T+ F +
Sbjct: 272 IDGVDANGFNFRRTGRFSCMQLLTSPAPPTTTQAPVTTCFNN 313
>Z95559-8|CAB54437.1| 720|Caenorhabditis elegans Hypothetical
protein Y41E3.16 protein.
Length = 720
Score = 27.5 bits (58), Expect = 6.4
Identities = 11/39 (28%), Positives = 22/39 (56%)
Frame = +1
Query: 334 RISSLVHTRQGAQTIREERRQTVQPKEEHLGERSRNKPR 450
++ S+ + +GAQ ++EE + + +EE E R P+
Sbjct: 86 KVDSIRRSTRGAQQVKEEEPEEEEEEEEEQDEPVRETPK 124
>Z81017-11|CAC70095.2| 1158|Caenorhabditis elegans Hypothetical
protein F58A3.2c protein.
Length = 1158
Score = 27.1 bits (57), Expect = 8.5
Identities = 10/29 (34%), Positives = 18/29 (62%)
Frame = +1
Query: 109 VHEIPRSKPAVFESAGDGTVGVWWRSTFR 195
V E+ RSK ++ G+G G W++T++
Sbjct: 632 VWEVERSKLSLVHMLGEGAFGEVWKATYK 660
>Z81017-10|CAE47468.1| 1051|Caenorhabditis elegans Hypothetical
protein F58A3.2e protein.
Length = 1051
Score = 27.1 bits (57), Expect = 8.5
Identities = 10/29 (34%), Positives = 18/29 (62%)
Frame = +1
Query: 109 VHEIPRSKPAVFESAGDGTVGVWWRSTFR 195
V E+ RSK ++ G+G G W++T++
Sbjct: 632 VWEVERSKLSLVHMLGEGAFGEVWKATYK 660
>Z81017-9|CAD44136.1| 1096|Caenorhabditis elegans Hypothetical
protein F58A3.2d protein.
Length = 1096
Score = 27.1 bits (57), Expect = 8.5
Identities = 10/29 (34%), Positives = 18/29 (62%)
Frame = +1
Query: 109 VHEIPRSKPAVFESAGDGTVGVWWRSTFR 195
V E+ RSK ++ G+G G W++T++
Sbjct: 632 VWEVERSKLSLVHMLGEGAFGEVWKATYK 660
>Z81017-8|CAC70094.2| 988|Caenorhabditis elegans Hypothetical
protein F58A3.2b protein.
Length = 988
Score = 27.1 bits (57), Expect = 8.5
Identities = 10/29 (34%), Positives = 18/29 (62%)
Frame = +1
Query: 109 VHEIPRSKPAVFESAGDGTVGVWWRSTFR 195
V E+ RSK ++ G+G G W++T++
Sbjct: 580 VWEVERSKLSLVHMLGEGAFGEVWKATYK 608
>Z81017-7|CAB02673.2| 1040|Caenorhabditis elegans Hypothetical
protein F58A3.2a protein.
Length = 1040
Score = 27.1 bits (57), Expect = 8.5
Identities = 10/29 (34%), Positives = 18/29 (62%)
Frame = +1
Query: 109 VHEIPRSKPAVFESAGDGTVGVWWRSTFR 195
V E+ RSK ++ G+G G W++T++
Sbjct: 632 VWEVERSKLSLVHMLGEGAFGEVWKATYK 660
>U39761-1|AAC46934.1| 1040|Caenorhabditis elegans EGL-15 protein.
Length = 1040
Score = 27.1 bits (57), Expect = 8.5
Identities = 10/29 (34%), Positives = 18/29 (62%)
Frame = +1
Query: 109 VHEIPRSKPAVFESAGDGTVGVWWRSTFR 195
V E+ RSK ++ G+G G W++T++
Sbjct: 632 VWEVERSKLSLVHMLGEGAFGEVWKATYK 660
>U13642-4|AAG00043.2| 687|Caenorhabditis elegans Hypothetical
protein ZC395.8 protein.
Length = 687
Score = 27.1 bits (57), Expect = 8.5
Identities = 15/59 (25%), Positives = 28/59 (47%)
Frame = -1
Query: 339 NSSTKYIMKNPPHIIKPARNTGTSGISPVSCNNSMFSSTSGRRCMNVVAKSTPPPNANS 163
N + + P + K A++ GTS SP + N +++ C N + S P +++S
Sbjct: 117 NKRSSVVTPTSPPVPKKAKS-GTSTTSPFAFLNRRTNNSESSLCPNASSTSAQPASSSS 174
>AY288941-1|AAP44084.1| 987|Caenorhabditis elegans EGL-15 protein.
Length = 987
Score = 27.1 bits (57), Expect = 8.5
Identities = 10/29 (34%), Positives = 18/29 (62%)
Frame = +1
Query: 109 VHEIPRSKPAVFESAGDGTVGVWWRSTFR 195
V E+ RSK ++ G+G G W++T++
Sbjct: 579 VWEVERSKLSLVHMLGEGAFGEVWKATYK 607
>AF039720-1|AAB96694.1| 437|Caenorhabditis elegans Hypothetical
protein F33D11.5 protein.
Length = 437
Score = 27.1 bits (57), Expect = 8.5
Identities = 11/20 (55%), Positives = 15/20 (75%)
Frame = +2
Query: 440 INQETKQIENETNSGHSHLV 499
I Q KQIENET +G+++ V
Sbjct: 65 IRQRYKQIENETTTGYAYAV 84
>AF003136-5|AAK21372.1| 203|Caenorhabditis elegans Hypothetical
protein F28B3.4 protein.
Length = 203
Score = 27.1 bits (57), Expect = 8.5
Identities = 14/35 (40%), Positives = 18/35 (51%)
Frame = -1
Query: 306 PHIIKPARNTGTSGISPVSCNNSMFSSTSGRRCMN 202
P +KP R GTS S S S+ SGRR ++
Sbjct: 152 PQPVKPHRRNGTSVSRSSSAQKSKRSNHSGRRMLS 186
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,161,800
Number of Sequences: 27780
Number of extensions: 299616
Number of successful extensions: 1244
Number of sequences better than 10.0: 26
Number of HSP's better than 10.0 without gapping: 1152
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1244
length of database: 12,740,198
effective HSP length: 77
effective length of database: 10,601,138
effective search space used: 1060113800
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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