Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmmt25a15
         (128 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

X05016-1|CAA28672.1|  113|Drosophila melanogaster r-protein prot...    38   0.002
AE013599-2313|AAS64838.1|  113|Drosophila melanogaster CG4918-PB...    38   0.002
AE013599-2312|AAF57979.1|  113|Drosophila melanogaster CG4918-PA...    38   0.002
X05466-1|CAA29026.1|  113|Drosophila melanogaster r ribosomal pr...    38   0.003
AY119253-1|AAM51113.1|  113|Drosophila melanogaster SD22208p pro...    38   0.003
BT025042-1|ABE73213.1| 2313|Drosophila melanogaster LD27386p pro...    28   1.6  
BT003783-1|AAO41464.1|  994|Drosophila melanogaster LP02833p pro...    28   1.6  
AY050232-1|AAK84931.1| 1443|Drosophila melanogaster SD01656p pro...    28   1.6  
AE014298-1909|AAF48273.2| 2362|Drosophila melanogaster CG1716-PA...    28   1.6  
AE014297-1651|AAF54925.1|  988|Drosophila melanogaster CG8773-PA...    28   1.6  

>X05016-1|CAA28672.1|  113|Drosophila melanogaster r-protein
           protein.
          Length = 113

 Score = 37.9 bits (84), Expect = 0.002
 Identities = 17/23 (73%), Positives = 20/23 (86%)
 Frame = +1

Query: 58  MRYVAAYLLAVLGGXTTPAAADV 126
           MRYVAAYLLAVLGG  +PA +D+
Sbjct: 1   MRYVAAYLLAVLGGKDSPANSDL 23


>AE013599-2313|AAS64838.1|  113|Drosophila melanogaster CG4918-PB,
           isoform B protein.
          Length = 113

 Score = 37.9 bits (84), Expect = 0.002
 Identities = 17/23 (73%), Positives = 20/23 (86%)
 Frame = +1

Query: 58  MRYVAAYLLAVLGGXTTPAAADV 126
           MRYVAAYLLAVLGG  +PA +D+
Sbjct: 1   MRYVAAYLLAVLGGKDSPANSDL 23


>AE013599-2312|AAF57979.1|  113|Drosophila melanogaster CG4918-PA,
           isoform A protein.
          Length = 113

 Score = 37.9 bits (84), Expect = 0.002
 Identities = 17/23 (73%), Positives = 20/23 (86%)
 Frame = +1

Query: 58  MRYVAAYLLAVLGGXTTPAAADV 126
           MRYVAAYLLAVLGG  +PA +D+
Sbjct: 1   MRYVAAYLLAVLGGKDSPANSDL 23


>X05466-1|CAA29026.1|  113|Drosophila melanogaster r ribosomal
           protein protein.
          Length = 113

 Score = 37.5 bits (83), Expect = 0.003
 Identities = 17/23 (73%), Positives = 19/23 (82%)
 Frame = +1

Query: 58  MRYVAAYLLAVLGGXTTPAAADV 126
           MRYVAAYLLAVLGG  +PA  D+
Sbjct: 1   MRYVAAYLLAVLGGKDSPANGDL 23


>AY119253-1|AAM51113.1|  113|Drosophila melanogaster SD22208p
           protein.
          Length = 113

 Score = 37.5 bits (83), Expect = 0.003
 Identities = 17/23 (73%), Positives = 19/23 (82%)
 Frame = +1

Query: 58  MRYVAAYLLAVLGGXTTPAAADV 126
           MRYVAAYLLAVLGG  +PA  D+
Sbjct: 1   MRYVAAYLLAVLGGKDSPANGDL 23


>BT025042-1|ABE73213.1| 2313|Drosophila melanogaster LD27386p protein.
          Length = 2313

 Score = 28.3 bits (60), Expect = 1.6
 Identities = 12/23 (52%), Positives = 14/23 (60%)
 Frame = -3

Query: 78   IRGHVTHFLSPNXHETCNAERIT 10
            I GHV +FL P   E+C   RIT
Sbjct: 2228 ISGHVANFLRPYRKESCTLGRIT 2250


>BT003783-1|AAO41464.1|  994|Drosophila melanogaster LP02833p
           protein.
          Length = 994

 Score = 28.3 bits (60), Expect = 1.6
 Identities = 11/34 (32%), Positives = 19/34 (55%)
 Frame = +2

Query: 17  LSALHVSCXLGLKKCVTWPRIYWLCWVXRPRXLP 118
           ++AL  +C LGL+ C+T     +  W+ +P   P
Sbjct: 783 VTALSAACSLGLESCLTEAGEQFNAWLAKPEDRP 816


>AY050232-1|AAK84931.1| 1443|Drosophila melanogaster SD01656p protein.
          Length = 1443

 Score = 28.3 bits (60), Expect = 1.6
 Identities = 12/23 (52%), Positives = 14/23 (60%)
 Frame = -3

Query: 78   IRGHVTHFLSPNXHETCNAERIT 10
            I GHV +FL P   E+C   RIT
Sbjct: 1358 ISGHVANFLRPYRKESCTLGRIT 1380


>AE014298-1909|AAF48273.2| 2362|Drosophila melanogaster CG1716-PA
            protein.
          Length = 2362

 Score = 28.3 bits (60), Expect = 1.6
 Identities = 12/23 (52%), Positives = 14/23 (60%)
 Frame = -3

Query: 78   IRGHVTHFLSPNXHETCNAERIT 10
            I GHV +FL P   E+C   RIT
Sbjct: 2277 ISGHVANFLRPYRKESCTLGRIT 2299


>AE014297-1651|AAF54925.1|  988|Drosophila melanogaster CG8773-PA
           protein.
          Length = 988

 Score = 28.3 bits (60), Expect = 1.6
 Identities = 11/34 (32%), Positives = 19/34 (55%)
 Frame = +2

Query: 17  LSALHVSCXLGLKKCVTWPRIYWLCWVXRPRXLP 118
           ++AL  +C LGL+ C+T     +  W+ +P   P
Sbjct: 777 VTALSAACSLGLESCLTEAGEQFNAWLAKPEDRP 810


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 4,813,475
Number of Sequences: 53049
Number of extensions: 45188
Number of successful extensions: 152
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 152
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 152
length of database: 24,988,368
effective HSP length: 23
effective length of database: 23,768,241
effective search space used: 451596579
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)