Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmmt25a07
         (616 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

05_07_0181 - 28225396-28225587,28226009-28226068,28226150-282264...    29   2.2  
02_02_0700 + 13058446-13058790,13059352-13059582,13060083-130602...    28   6.8  

>05_07_0181 -
           28225396-28225587,28226009-28226068,28226150-28226416,
           28227167-28227232,28228164-28228963,28229565-28229673,
           28230391-28232097
          Length = 1066

 Score = 29.5 bits (63), Expect = 2.2
 Identities = 11/23 (47%), Positives = 15/23 (65%)
 Frame = -1

Query: 127 GAISSGTCLCTVKKRFLVSRPFY 59
           GA+  G   CTV++RF  + PFY
Sbjct: 491 GALWQGNSSCTVRERFKAAEPFY 513


>02_02_0700 +
           13058446-13058790,13059352-13059582,13060083-13060241,
           13060483-13060635,13061619-13061702,13061847-13061915,
           13062374-13062421,13062487-13062621
          Length = 407

 Score = 27.9 bits (59), Expect = 6.8
 Identities = 12/23 (52%), Positives = 14/23 (60%)
 Frame = -3

Query: 110 HMFVYSEETFSSFTTILLICQSA 42
           HM +YS  +F S  TI  ICQ A
Sbjct: 349 HMHIYSLLSFCSINTIAAICQEA 371


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,869,181
Number of Sequences: 37544
Number of extensions: 254688
Number of successful extensions: 601
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 587
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 601
length of database: 14,793,348
effective HSP length: 79
effective length of database: 11,827,372
effective search space used: 1478421500
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)