Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmmt24p14
         (721 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB090821-1|BAC57917.1|  353|Anopheles gambiae gag-like protein p...    27   0.77 
CR954256-2|CAJ14143.1|  295|Anopheles gambiae cyclin protein.          25   1.8  
AY500851-1|AAS77205.1|  605|Anopheles gambiae G-protein coupled ...    24   4.1  
AB090813-1|BAC57901.1|  724|Anopheles gambiae gag-like protein p...    24   4.1  
DQ518576-1|ABF66618.1|  276|Anopheles gambiae putative cytoplasm...    24   5.4  
AJ459962-1|CAD31061.1|  685|Anopheles gambiae prophenoloxidase 9...    24   5.4  
AF510715-1|AAP47144.1|  470|Anopheles gambiae Rh-like glycoprote...    24   5.4  

>AB090821-1|BAC57917.1|  353|Anopheles gambiae gag-like protein
           protein.
          Length = 353

 Score = 26.6 bits (56), Expect = 0.77
 Identities = 13/42 (30%), Positives = 21/42 (50%)
 Frame = -3

Query: 656 RLWACTSLAHLELRLSPCSGSDRSNS*RHCPSMPYR*RSCSA 531
           R + C    H     + C+G DRS+   HC +  +R  SC++
Sbjct: 290 RCFRCLERGHTT---ADCAGEDRSSLCLHCGAADHRAASCTS 328


>CR954256-2|CAJ14143.1|  295|Anopheles gambiae cyclin protein.
          Length = 295

 Score = 25.4 bits (53), Expect = 1.8
 Identities = 9/14 (64%), Positives = 11/14 (78%)
 Frame = +1

Query: 382 PAHPGNRRAAPPRI 423
           P+HPG  RAA PR+
Sbjct: 227 PSHPGAHRAAEPRL 240


>AY500851-1|AAS77205.1|  605|Anopheles gambiae G-protein coupled
           receptor 3 protein.
          Length = 605

 Score = 24.2 bits (50), Expect = 4.1
 Identities = 7/27 (25%), Positives = 16/27 (59%)
 Frame = +2

Query: 188 QMNVFGRQLGVTPAAMGIVTAILPLLW 268
           +MN F +QL +    +G++  +  ++W
Sbjct: 260 RMNFFIKQLAIADLCVGLLNVLTDIIW 286


>AB090813-1|BAC57901.1|  724|Anopheles gambiae gag-like protein
           protein.
          Length = 724

 Score = 24.2 bits (50), Expect = 4.1
 Identities = 13/50 (26%), Positives = 26/50 (52%)
 Frame = -1

Query: 277 RSRPQQGQNSCHDSHRCGRDSQLPPEHIHLRQQRPQGGEEKEEMRLYRQQ 128
           + RP+Q Q       +   +  +PP+    RQQ+ Q  +++++ +  RQQ
Sbjct: 276 QQRPRQQQQQQQQQQQQQGERYVPPQLRQQRQQQ-QHQQQQQQQQQQRQQ 324



 Score = 24.2 bits (50), Expect = 4.1
 Identities = 12/47 (25%), Positives = 23/47 (48%)
 Frame = -1

Query: 289 EEWLRSRPQQGQNSCHDSHRCGRDSQLPPEHIHLRQQRPQGGEEKEE 149
           ++W + + QQ Q      HR     QL P     +QQ+ Q  +++++
Sbjct: 367 QQWQQQQQQQQQPRQSLPHRKQTQLQLSPRLQQQQQQQQQSQQQQQQ 413


>DQ518576-1|ABF66618.1|  276|Anopheles gambiae putative cytoplasmic
           carbonic anhydrase protein.
          Length = 276

 Score = 23.8 bits (49), Expect = 5.4
 Identities = 6/11 (54%), Positives = 9/11 (81%)
 Frame = +2

Query: 476 LEKYTCHWNCT 508
           LE++ CHW C+
Sbjct: 91  LEQFHCHWGCS 101


>AJ459962-1|CAD31061.1|  685|Anopheles gambiae prophenoloxidase 9
           protein.
          Length = 685

 Score = 23.8 bits (49), Expect = 5.4
 Identities = 10/25 (40%), Positives = 17/25 (68%)
 Frame = -2

Query: 573 SLSKYAVSMTVVFRRYTSNVPGVQF 499
           +L +YA+++ +V R+ T NVP   F
Sbjct: 123 TLFQYALAVALVHRKDTGNVPVPSF 147


>AF510715-1|AAP47144.1|  470|Anopheles gambiae Rh-like glycoprotein
           protein.
          Length = 470

 Score = 23.8 bits (49), Expect = 5.4
 Identities = 11/26 (42%), Positives = 13/26 (50%)
 Frame = +1

Query: 472 ELRKVHVPLELYSGNVRCVPAEHDRH 549
           E  +VH P E   GN+R  P   D H
Sbjct: 41  ETARVHSPAESEGGNLRKYPHFQDIH 66


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 734,929
Number of Sequences: 2352
Number of extensions: 15719
Number of successful extensions: 39
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 37
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 39
length of database: 563,979
effective HSP length: 63
effective length of database: 415,803
effective search space used: 73181328
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)