Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmmt24p14
         (721 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ002535-1|CAC44768.1| 6620|Homo sapiens obscurin protein.             31   4.1  
AB040958-1|BAA96049.2| 1135|Homo sapiens KIAA1525 protein protein.     30   7.3  

>AJ002535-1|CAC44768.1| 6620|Homo sapiens obscurin protein.
          Length = 6620

 Score = 31.1 bits (67), Expect = 4.1
 Identities = 11/34 (32%), Positives = 20/34 (58%)
 Frame = -2

Query: 258  GRIAVTIPIAAGVTPSCRPNTFICGNSGPRAAKK 157
            G +  T+ +A  ++P+C    + CGN+ PR  K+
Sbjct: 1820 GELGGTVTLACELSPACAEVVWRCGNTQPRVGKR 1853


>AB040958-1|BAA96049.2| 1135|Homo sapiens KIAA1525 protein protein.
          Length = 1135

 Score = 30.3 bits (65), Expect = 7.3
 Identities = 14/33 (42%), Positives = 19/33 (57%)
 Frame = -2

Query: 270  AHSRGRIAVTIPIAAGVTPSCRPNTFICGNSGP 172
            AH RGR AV   +  G+TP+ RP+   C +  P
Sbjct: 1055 AHVRGRTAVETDLTFGLTPN-RPSLSACSSEAP 1086


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 102,198,358
Number of Sequences: 237096
Number of extensions: 2187167
Number of successful extensions: 5055
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 4874
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5054
length of database: 76,859,062
effective HSP length: 88
effective length of database: 55,994,614
effective search space used: 8455186714
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)