Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmmt24n22
(264 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
DQ325075-1|ABD14089.1| 181|Apis mellifera complementary sex det... 22 1.5
DQ325074-1|ABD14088.1| 181|Apis mellifera complementary sex det... 22 1.5
DQ325073-1|ABD14087.1| 181|Apis mellifera complementary sex det... 22 1.5
DQ325072-1|ABD14086.1| 181|Apis mellifera complementary sex det... 22 1.5
DQ325071-1|ABD14085.1| 181|Apis mellifera complementary sex det... 22 1.5
DQ325070-1|ABD14084.1| 181|Apis mellifera complementary sex det... 22 1.5
DQ325069-1|ABD14083.1| 181|Apis mellifera complementary sex det... 22 1.5
DQ325068-1|ABD14082.1| 181|Apis mellifera complementary sex det... 22 1.5
AY569696-1|AAS86649.1| 414|Apis mellifera complementary sex det... 22 1.5
AY569695-1|AAS86648.1| 414|Apis mellifera complementary sex det... 22 1.5
DQ325133-1|ABD14147.1| 181|Apis mellifera complementary sex det... 21 1.9
DQ067178-1|AAZ20250.1| 448|Apis mellifera conserved ATPase doma... 21 2.6
DQ325103-1|ABD14117.1| 182|Apis mellifera complementary sex det... 21 3.4
DQ325089-1|ABD14103.1| 185|Apis mellifera complementary sex det... 21 3.4
DQ325088-1|ABD14102.1| 185|Apis mellifera complementary sex det... 21 3.4
DQ667184-1|ABG75736.1| 489|Apis mellifera GABA-gated ion channe... 20 4.5
AF159569-1|AAF70859.1| 1124|Apis mellifera period clock protein ... 20 4.5
DQ435326-1|ABD92641.1| 132|Apis mellifera OBP9 protein. 20 5.9
AY569697-1|AAS86650.1| 413|Apis mellifera complementary sex det... 20 5.9
AJ968562-1|CAI91546.1| 998|Apis mellifera protein ( Apis mellif... 20 5.9
AM420631-1|CAM06631.1| 153|Apis mellifera bursicon subunit alph... 19 7.8
>DQ325075-1|ABD14089.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 21.8 bits (44), Expect = 1.5
Identities = 8/26 (30%), Positives = 13/26 (50%)
Frame = +1
Query: 88 ICSTDRLIFDTQTYSKIYNRYEKKNF 165
I S + + + Y+ YN Y K N+
Sbjct: 81 IISNNNSLSNNYNYNNNYNNYNKHNY 106
>DQ325074-1|ABD14088.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 21.8 bits (44), Expect = 1.5
Identities = 8/26 (30%), Positives = 13/26 (50%)
Frame = +1
Query: 88 ICSTDRLIFDTQTYSKIYNRYEKKNF 165
I S + + + Y+ YN Y K N+
Sbjct: 81 IISNNNSLSNNYNYNNNYNNYNKHNY 106
>DQ325073-1|ABD14087.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 21.8 bits (44), Expect = 1.5
Identities = 8/26 (30%), Positives = 13/26 (50%)
Frame = +1
Query: 88 ICSTDRLIFDTQTYSKIYNRYEKKNF 165
I S + + + Y+ YN Y K N+
Sbjct: 81 IISNNNSLSNNYNYNNNYNNYNKHNY 106
>DQ325072-1|ABD14086.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 21.8 bits (44), Expect = 1.5
Identities = 8/26 (30%), Positives = 13/26 (50%)
Frame = +1
Query: 88 ICSTDRLIFDTQTYSKIYNRYEKKNF 165
I S + + + Y+ YN Y K N+
Sbjct: 81 IISNNNSLSNNYNYNNNYNNYNKHNY 106
>DQ325071-1|ABD14085.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 21.8 bits (44), Expect = 1.5
Identities = 8/26 (30%), Positives = 13/26 (50%)
Frame = +1
Query: 88 ICSTDRLIFDTQTYSKIYNRYEKKNF 165
I S + + + Y+ YN Y K N+
Sbjct: 81 IISNNNSLSNNYNYNNNYNNYNKHNY 106
>DQ325070-1|ABD14084.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 21.8 bits (44), Expect = 1.5
Identities = 8/26 (30%), Positives = 13/26 (50%)
Frame = +1
Query: 88 ICSTDRLIFDTQTYSKIYNRYEKKNF 165
I S + + + Y+ YN Y K N+
Sbjct: 81 IISNNNSLSNNYNYNNNYNNYNKHNY 106
>DQ325069-1|ABD14083.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 21.8 bits (44), Expect = 1.5
Identities = 8/26 (30%), Positives = 13/26 (50%)
Frame = +1
Query: 88 ICSTDRLIFDTQTYSKIYNRYEKKNF 165
I S + + + Y+ YN Y K N+
Sbjct: 81 IISNNNSLSNNYNYNNNYNNYNKHNY 106
>DQ325068-1|ABD14082.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 21.8 bits (44), Expect = 1.5
Identities = 8/26 (30%), Positives = 13/26 (50%)
Frame = +1
Query: 88 ICSTDRLIFDTQTYSKIYNRYEKKNF 165
I S + + + Y+ YN Y K N+
Sbjct: 81 IISNNNSLSNNYNYNNNYNNYNKHNY 106
>AY569696-1|AAS86649.1| 414|Apis mellifera complementary sex
determiner protein.
Length = 414
Score = 21.8 bits (44), Expect = 1.5
Identities = 8/26 (30%), Positives = 13/26 (50%)
Frame = +1
Query: 88 ICSTDRLIFDTQTYSKIYNRYEKKNF 165
I S + + + Y+ YN Y K N+
Sbjct: 314 IISNNNSLSNNYNYNNNYNNYNKHNY 339
>AY569695-1|AAS86648.1| 414|Apis mellifera complementary sex
determiner protein.
Length = 414
Score = 21.8 bits (44), Expect = 1.5
Identities = 8/26 (30%), Positives = 13/26 (50%)
Frame = +1
Query: 88 ICSTDRLIFDTQTYSKIYNRYEKKNF 165
I S + + + Y+ YN Y K N+
Sbjct: 314 IISNNNSLSNNYNYNNNYNNYNKHNY 339
>DQ325133-1|ABD14147.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 21.4 bits (43), Expect = 1.9
Identities = 8/26 (30%), Positives = 13/26 (50%)
Frame = +1
Query: 88 ICSTDRLIFDTQTYSKIYNRYEKKNF 165
I S + + + Y+ YN Y K N+
Sbjct: 81 IISNNNPLSNNYNYNNNYNNYNKHNY 106
>DQ067178-1|AAZ20250.1| 448|Apis mellifera conserved ATPase domain
protein protein.
Length = 448
Score = 21.0 bits (42), Expect = 2.6
Identities = 6/10 (60%), Positives = 8/10 (80%)
Frame = +2
Query: 2 ACLDPTLPYC 31
AC +P+L YC
Sbjct: 171 ACFEPSLDYC 180
>DQ325103-1|ABD14117.1| 182|Apis mellifera complementary sex
determiner protein.
Length = 182
Score = 20.6 bits (41), Expect = 3.4
Identities = 7/17 (41%), Positives = 10/17 (58%)
Frame = +1
Query: 127 YSKIYNRYEKKNFFGKN 177
Y+ YN Y KK ++ N
Sbjct: 97 YNNNYNNYNKKLYYNIN 113
>DQ325089-1|ABD14103.1| 185|Apis mellifera complementary sex
determiner protein.
Length = 185
Score = 20.6 bits (41), Expect = 3.4
Identities = 9/25 (36%), Positives = 17/25 (68%), Gaps = 2/25 (8%)
Frame = +2
Query: 131 RKY--ITDTKKKIFLEKTNKKCNQK 199
R+Y + + K+K+ E+TN+K N +
Sbjct: 16 RRYEKLHNEKEKLLEERTNRKRNSR 40
>DQ325088-1|ABD14102.1| 185|Apis mellifera complementary sex
determiner protein.
Length = 185
Score = 20.6 bits (41), Expect = 3.4
Identities = 9/25 (36%), Positives = 17/25 (68%), Gaps = 2/25 (8%)
Frame = +2
Query: 131 RKY--ITDTKKKIFLEKTNKKCNQK 199
R+Y + + K+K+ E+TN+K N +
Sbjct: 16 RRYEKLHNEKEKLLEERTNRKRNSR 40
>DQ667184-1|ABG75736.1| 489|Apis mellifera GABA-gated ion channel
protein.
Length = 489
Score = 20.2 bits (40), Expect = 4.5
Identities = 12/29 (41%), Positives = 18/29 (62%), Gaps = 3/29 (10%)
Frame = +1
Query: 97 TDRLIFDTQTYSKIYNRYE---KKNFFGK 174
+DRL TQT S+I + Y+ + NF G+
Sbjct: 31 SDRLENVTQTISRILDGYDIRLRPNFGGE 59
>AF159569-1|AAF70859.1| 1124|Apis mellifera period clock protein
protein.
Length = 1124
Score = 20.2 bits (40), Expect = 4.5
Identities = 7/7 (100%), Positives = 7/7 (100%)
Frame = +3
Query: 39 ENAPLPP 59
ENAPLPP
Sbjct: 1106 ENAPLPP 1112
>DQ435326-1|ABD92641.1| 132|Apis mellifera OBP9 protein.
Length = 132
Score = 19.8 bits (39), Expect = 5.9
Identities = 7/11 (63%), Positives = 7/11 (63%)
Frame = +2
Query: 179 NKKCNQKCFFT 211
N KC KCF T
Sbjct: 54 NLKCYLKCFMT 64
>AY569697-1|AAS86650.1| 413|Apis mellifera complementary sex
determiner protein.
Length = 413
Score = 19.8 bits (39), Expect = 5.9
Identities = 6/19 (31%), Positives = 10/19 (52%)
Frame = +1
Query: 112 FDTQTYSKIYNRYEKKNFF 168
++ Y YN Y KK ++
Sbjct: 324 YNNNNYKYNYNNYNKKLYY 342
>AJ968562-1|CAI91546.1| 998|Apis mellifera protein ( Apis mellifera
ORF for hypotheticalprotein. ).
Length = 998
Score = 19.8 bits (39), Expect = 5.9
Identities = 6/19 (31%), Positives = 10/19 (52%)
Frame = -3
Query: 148 ICYIFSSMFEYRILSGRCY 92
ICY+ + Y I +C+
Sbjct: 658 ICYLGKAYLMYAIAGSQCF 676
>AM420631-1|CAM06631.1| 153|Apis mellifera bursicon subunit alpha
protein precursor protein.
Length = 153
Score = 19.4 bits (38), Expect = 7.8
Identities = 13/53 (24%), Positives = 20/53 (37%)
Frame = +2
Query: 41 ECSATPAEGCEPASGASVAPTA*YSILKHTRKYITDTKKKIFLEKTNKKCNQK 199
EC ATP G P Y+ Y+ + KI+ + + C Q+
Sbjct: 28 ECQATPVIHFLQYPGCVPKPIPSYACRGRCSSYLQVSGSKIWQMERSCMCCQE 80
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 64,615
Number of Sequences: 438
Number of extensions: 1041
Number of successful extensions: 22
Number of sequences better than 10.0: 21
Number of HSP's better than 10.0 without gapping: 22
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 22
length of database: 146,343
effective HSP length: 48
effective length of database: 125,319
effective search space used: 4887441
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 37 (19.9 bits)
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