BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmmt24m10
(149 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AM050259-1|CAJ18340.1| 683|Apis mellifera putative H3K9 methylt... 22 0.58
DQ325076-1|ABD14090.1| 191|Apis mellifera complementary sex det... 21 1.3
DQ325102-1|ABD14116.1| 183|Apis mellifera complementary sex det... 21 1.8
DQ325101-1|ABD14115.1| 182|Apis mellifera complementary sex det... 21 1.8
DQ325100-1|ABD14114.1| 183|Apis mellifera complementary sex det... 21 1.8
DQ325099-1|ABD14113.1| 183|Apis mellifera complementary sex det... 21 1.8
DQ325098-1|ABD14112.1| 183|Apis mellifera complementary sex det... 21 1.8
DQ325097-1|ABD14111.1| 183|Apis mellifera complementary sex det... 21 1.8
DQ325096-1|ABD14110.1| 183|Apis mellifera complementary sex det... 21 1.8
DQ325095-1|ABD14109.1| 183|Apis mellifera complementary sex det... 21 1.8
DQ325077-1|ABD14091.1| 181|Apis mellifera complementary sex det... 21 1.8
DQ232888-1|ABB36783.1| 499|Apis mellifera cytochrome P450 monoo... 19 5.4
M29493-1|AAA27728.1| 74|Apis mellifera protein ( Bee homeobox-... 18 9.4
DQ667194-1|ABG75746.1| 391|Apis mellifera cys-loop ligand-gated... 18 9.4
DQ325094-1|ABD14108.1| 175|Apis mellifera complementary sex det... 18 9.4
DQ325093-1|ABD14107.1| 175|Apis mellifera complementary sex det... 18 9.4
DQ325092-1|ABD14106.1| 175|Apis mellifera complementary sex det... 18 9.4
DQ325091-1|ABD14105.1| 175|Apis mellifera complementary sex det... 18 9.4
AY569716-1|AAS86669.1| 406|Apis mellifera complementary sex det... 18 9.4
AY569710-1|AAS86663.1| 408|Apis mellifera complementary sex det... 18 9.4
AY569709-1|AAS86662.1| 408|Apis mellifera complementary sex det... 18 9.4
AY569708-1|AAS86661.1| 408|Apis mellifera complementary sex det... 18 9.4
AY569707-1|AAS86660.1| 408|Apis mellifera complementary sex det... 18 9.4
AY569706-1|AAS86659.1| 397|Apis mellifera complementary sex det... 18 9.4
AY569704-1|AAS86657.1| 426|Apis mellifera complementary sex det... 18 9.4
AJ276511-1|CAC06383.1| 352|Apis mellifera Antennapedia protein ... 18 9.4
>AM050259-1|CAJ18340.1| 683|Apis mellifera putative H3K9
methyltransferase protein.
Length = 683
Score = 22.2 bits (45), Expect = 0.58
Identities = 11/48 (22%), Positives = 22/48 (45%)
Frame = +2
Query: 5 TSLLIDLEFFLVNVQKFVEXXXXXXXXXXKVFQSKTLLIELITTHKKK 148
TS+ ++ +N+ KF++ KV + L + +I KK+
Sbjct: 330 TSISVESNTMFINILKFLKQKYVKNSKLEKVIKHDILRMLIIDLRKKQ 377
>DQ325076-1|ABD14090.1| 191|Apis mellifera complementary sex
determiner protein.
Length = 191
Score = 21.0 bits (42), Expect = 1.3
Identities = 9/26 (34%), Positives = 15/26 (57%)
Frame = -3
Query: 126 NSINKVFD*NTFNYNRYKTMISSTNF 49
N+ N ++ N NYN YK + + N+
Sbjct: 99 NNYNN-YNYNNNNYNNYKKLYYNINY 123
>DQ325102-1|ABD14116.1| 183|Apis mellifera complementary sex
determiner protein.
Length = 183
Score = 20.6 bits (41), Expect = 1.8
Identities = 7/17 (41%), Positives = 10/17 (58%)
Frame = -3
Query: 99 NTFNYNRYKTMISSTNF 49
N NYN YK + + N+
Sbjct: 99 NNNNYNNYKKLYYNINY 115
>DQ325101-1|ABD14115.1| 182|Apis mellifera complementary sex
determiner protein.
Length = 182
Score = 20.6 bits (41), Expect = 1.8
Identities = 7/17 (41%), Positives = 10/17 (58%)
Frame = -3
Query: 99 NTFNYNRYKTMISSTNF 49
N NYN YK + + N+
Sbjct: 99 NNNNYNNYKKLYYNINY 115
>DQ325100-1|ABD14114.1| 183|Apis mellifera complementary sex
determiner protein.
Length = 183
Score = 20.6 bits (41), Expect = 1.8
Identities = 7/17 (41%), Positives = 10/17 (58%)
Frame = -3
Query: 99 NTFNYNRYKTMISSTNF 49
N NYN YK + + N+
Sbjct: 99 NNNNYNNYKKLYYNINY 115
>DQ325099-1|ABD14113.1| 183|Apis mellifera complementary sex
determiner protein.
Length = 183
Score = 20.6 bits (41), Expect = 1.8
Identities = 7/17 (41%), Positives = 10/17 (58%)
Frame = -3
Query: 99 NTFNYNRYKTMISSTNF 49
N NYN YK + + N+
Sbjct: 99 NNNNYNNYKKLYYNINY 115
>DQ325098-1|ABD14112.1| 183|Apis mellifera complementary sex
determiner protein.
Length = 183
Score = 20.6 bits (41), Expect = 1.8
Identities = 7/17 (41%), Positives = 10/17 (58%)
Frame = -3
Query: 99 NTFNYNRYKTMISSTNF 49
N NYN YK + + N+
Sbjct: 99 NNNNYNNYKKLYYNINY 115
>DQ325097-1|ABD14111.1| 183|Apis mellifera complementary sex
determiner protein.
Length = 183
Score = 20.6 bits (41), Expect = 1.8
Identities = 7/17 (41%), Positives = 10/17 (58%)
Frame = -3
Query: 99 NTFNYNRYKTMISSTNF 49
N NYN YK + + N+
Sbjct: 99 NNNNYNNYKKLYYNINY 115
>DQ325096-1|ABD14110.1| 183|Apis mellifera complementary sex
determiner protein.
Length = 183
Score = 20.6 bits (41), Expect = 1.8
Identities = 7/17 (41%), Positives = 10/17 (58%)
Frame = -3
Query: 99 NTFNYNRYKTMISSTNF 49
N NYN YK + + N+
Sbjct: 99 NNNNYNNYKKLYYNINY 115
>DQ325095-1|ABD14109.1| 183|Apis mellifera complementary sex
determiner protein.
Length = 183
Score = 20.6 bits (41), Expect = 1.8
Identities = 7/17 (41%), Positives = 10/17 (58%)
Frame = -3
Query: 99 NTFNYNRYKTMISSTNF 49
N NYN YK + + N+
Sbjct: 99 NNNNYNNYKKLYYNINY 115
>DQ325077-1|ABD14091.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 20.6 bits (41), Expect = 1.8
Identities = 7/17 (41%), Positives = 10/17 (58%)
Frame = -3
Query: 99 NTFNYNRYKTMISSTNF 49
N NYN YK + + N+
Sbjct: 97 NNNNYNNYKKLYYNINY 113
>DQ232888-1|ABB36783.1| 499|Apis mellifera cytochrome P450
monooxygenase protein.
Length = 499
Score = 19.0 bits (37), Expect = 5.4
Identities = 7/16 (43%), Positives = 11/16 (68%)
Frame = +2
Query: 95 VFQSKTLLIELITTHK 142
V+Q+K LI ++ HK
Sbjct: 451 VYQTKVGLITILRNHK 466
>M29493-1|AAA27728.1| 74|Apis mellifera protein ( Bee
homeobox-containing gene,partial cds, clone H90. ).
Length = 74
Score = 18.2 bits (35), Expect = 9.4
Identities = 6/8 (75%), Positives = 7/8 (87%)
Frame = -3
Query: 93 FNYNRYKT 70
F+YNRY T
Sbjct: 27 FHYNRYLT 34
>DQ667194-1|ABG75746.1| 391|Apis mellifera cys-loop ligand-gated
ion channel subunit protein.
Length = 391
Score = 18.2 bits (35), Expect = 9.4
Identities = 7/23 (30%), Positives = 10/23 (43%)
Frame = +1
Query: 22 PGIFFGQCSEICGANHSFIPIVI 90
P + SEI NH F + +
Sbjct: 76 PYFLNAKVSEIAALNHKFSSVTL 98
>DQ325094-1|ABD14108.1| 175|Apis mellifera complementary sex
determiner protein.
Length = 175
Score = 18.2 bits (35), Expect = 9.4
Identities = 5/8 (62%), Positives = 6/8 (75%)
Frame = -3
Query: 99 NTFNYNRY 76
N +NYN Y
Sbjct: 87 NNYNYNNY 94
>DQ325093-1|ABD14107.1| 175|Apis mellifera complementary sex
determiner protein.
Length = 175
Score = 18.2 bits (35), Expect = 9.4
Identities = 5/8 (62%), Positives = 6/8 (75%)
Frame = -3
Query: 99 NTFNYNRY 76
N +NYN Y
Sbjct: 87 NNYNYNNY 94
>DQ325092-1|ABD14106.1| 175|Apis mellifera complementary sex
determiner protein.
Length = 175
Score = 18.2 bits (35), Expect = 9.4
Identities = 5/8 (62%), Positives = 6/8 (75%)
Frame = -3
Query: 99 NTFNYNRY 76
N +NYN Y
Sbjct: 87 NNYNYNNY 94
>DQ325091-1|ABD14105.1| 175|Apis mellifera complementary sex
determiner protein.
Length = 175
Score = 18.2 bits (35), Expect = 9.4
Identities = 5/8 (62%), Positives = 6/8 (75%)
Frame = -3
Query: 99 NTFNYNRY 76
N +NYN Y
Sbjct: 87 NNYNYNNY 94
>AY569716-1|AAS86669.1| 406|Apis mellifera complementary sex
determiner protein.
Length = 406
Score = 18.2 bits (35), Expect = 9.4
Identities = 5/8 (62%), Positives = 6/8 (75%)
Frame = -3
Query: 99 NTFNYNRY 76
N +NYN Y
Sbjct: 320 NNYNYNNY 327
>AY569710-1|AAS86663.1| 408|Apis mellifera complementary sex
determiner protein.
Length = 408
Score = 18.2 bits (35), Expect = 9.4
Identities = 5/8 (62%), Positives = 6/8 (75%)
Frame = -3
Query: 99 NTFNYNRY 76
N +NYN Y
Sbjct: 320 NNYNYNNY 327
>AY569709-1|AAS86662.1| 408|Apis mellifera complementary sex
determiner protein.
Length = 408
Score = 18.2 bits (35), Expect = 9.4
Identities = 5/8 (62%), Positives = 6/8 (75%)
Frame = -3
Query: 99 NTFNYNRY 76
N +NYN Y
Sbjct: 320 NNYNYNNY 327
>AY569708-1|AAS86661.1| 408|Apis mellifera complementary sex
determiner protein.
Length = 408
Score = 18.2 bits (35), Expect = 9.4
Identities = 5/8 (62%), Positives = 6/8 (75%)
Frame = -3
Query: 99 NTFNYNRY 76
N +NYN Y
Sbjct: 320 NNYNYNNY 327
>AY569707-1|AAS86660.1| 408|Apis mellifera complementary sex
determiner protein.
Length = 408
Score = 18.2 bits (35), Expect = 9.4
Identities = 5/8 (62%), Positives = 6/8 (75%)
Frame = -3
Query: 99 NTFNYNRY 76
N +NYN Y
Sbjct: 320 NNYNYNNY 327
>AY569706-1|AAS86659.1| 397|Apis mellifera complementary sex
determiner protein.
Length = 397
Score = 18.2 bits (35), Expect = 9.4
Identities = 5/8 (62%), Positives = 6/8 (75%)
Frame = -3
Query: 99 NTFNYNRY 76
N +NYN Y
Sbjct: 309 NNYNYNNY 316
>AY569704-1|AAS86657.1| 426|Apis mellifera complementary sex
determiner protein.
Length = 426
Score = 18.2 bits (35), Expect = 9.4
Identities = 6/11 (54%), Positives = 7/11 (63%)
Frame = -3
Query: 99 NTFNYNRYKTM 67
N NYN YK +
Sbjct: 342 NNNNYNNYKKL 352
>AJ276511-1|CAC06383.1| 352|Apis mellifera Antennapedia protein
protein.
Length = 352
Score = 18.2 bits (35), Expect = 9.4
Identities = 6/8 (75%), Positives = 7/8 (87%)
Frame = -3
Query: 93 FNYNRYKT 70
F+YNRY T
Sbjct: 289 FHYNRYLT 296
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 33,705
Number of Sequences: 438
Number of extensions: 397
Number of successful extensions: 26
Number of sequences better than 10.0: 26
Number of HSP's better than 10.0 without gapping: 26
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 26
length of database: 146,343
effective HSP length: 30
effective length of database: 133,203
effective search space used: 2530857
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 35 (18.9 bits)
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