Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmmt24m08
         (612 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BT001655-1|AAN71410.1|  122|Drosophila melanogaster RE45155p pro...   127   1e-29
AE014134-1461|AAF52641.2|  122|Drosophila melanogaster CG7787-PA...   127   1e-29
AY089412-1|AAL90150.1|  249|Drosophila melanogaster AT23505p pro...    31   1.6  
AY061453-1|AAL29001.1|  985|Drosophila melanogaster LD39136p pro...    31   1.6  
AE013599-1040|AAF58831.2|  985|Drosophila melanogaster CG18011-P...    31   1.6  

>BT001655-1|AAN71410.1|  122|Drosophila melanogaster RE45155p
           protein.
          Length = 122

 Score =  127 bits (306), Expect = 1e-29
 Identities = 56/116 (48%), Positives = 79/116 (68%), Gaps = 1/116 (0%)
 Frame = +2

Query: 140 ETEQREYVEDGKNKLVVQCKFCGSKILDKKSSNYIAQEKDLPLMQQASNNDREVQN-ETI 316
           E +  E + DGKNK  V+C+FC   +L  +   Y  +E D+PLM Q  +   +  N E +
Sbjct: 4   EADFSEQITDGKNKSNVRCQFCNCLMLKAQEGTYNQEEVDVPLMTQKQDRTADSLNSEPL 63

Query: 317 KEFYHVENMYTFENIGFTHTVDNHKYLSCADCDAGPVGYHDTNTRHSYVAISRIVH 484
           K+F+ V++M TFENIGF++TVD  K+L CADC+ GPVGYHD +TRH Y+A+ R+VH
Sbjct: 64  KDFWLVKDMMTFENIGFSNTVDGRKFLVCADCERGPVGYHDLSTRHCYLALKRVVH 119


>AE014134-1461|AAF52641.2|  122|Drosophila melanogaster CG7787-PA
           protein.
          Length = 122

 Score =  127 bits (306), Expect = 1e-29
 Identities = 56/116 (48%), Positives = 79/116 (68%), Gaps = 1/116 (0%)
 Frame = +2

Query: 140 ETEQREYVEDGKNKLVVQCKFCGSKILDKKSSNYIAQEKDLPLMQQASNNDREVQN-ETI 316
           E +  E + DGKNK  V+C+FC   +L  +   Y  +E D+PLM Q  +   +  N E +
Sbjct: 4   EADFSEQITDGKNKSNVRCQFCNCLMLKAQEGTYNQEEVDVPLMTQKQDRTADSLNSEPL 63

Query: 317 KEFYHVENMYTFENIGFTHTVDNHKYLSCADCDAGPVGYHDTNTRHSYVAISRIVH 484
           K+F+ V++M TFENIGF++TVD  K+L CADC+ GPVGYHD +TRH Y+A+ R+VH
Sbjct: 64  KDFWLVKDMMTFENIGFSNTVDGRKFLVCADCERGPVGYHDLSTRHCYLALKRVVH 119


>AY089412-1|AAL90150.1|  249|Drosophila melanogaster AT23505p
           protein.
          Length = 249

 Score = 30.7 bits (66), Expect = 1.6
 Identities = 11/34 (32%), Positives = 21/34 (61%), Gaps = 3/34 (8%)
 Frame = -2

Query: 461 HSCVLC---LYHGTQLDPHHNLHNSNIYDCQRCA 369
           +SC +C    YH ++++ H  LH  + Y C++C+
Sbjct: 71  YSCSVCQKGFYHKSEMEAHQKLHGQS-YSCEQCS 103


>AY061453-1|AAL29001.1|  985|Drosophila melanogaster LD39136p
           protein.
          Length = 985

 Score = 30.7 bits (66), Expect = 1.6
 Identities = 11/34 (32%), Positives = 21/34 (61%), Gaps = 3/34 (8%)
 Frame = -2

Query: 461 HSCVLC---LYHGTQLDPHHNLHNSNIYDCQRCA 369
           +SC +C    YH ++++ H  LH  + Y C++C+
Sbjct: 807 YSCSVCQKGFYHKSEMEAHQKLHGQS-YSCEQCS 839


>AE013599-1040|AAF58831.2|  985|Drosophila melanogaster CG18011-PA
           protein.
          Length = 985

 Score = 30.7 bits (66), Expect = 1.6
 Identities = 11/34 (32%), Positives = 21/34 (61%), Gaps = 3/34 (8%)
 Frame = -2

Query: 461 HSCVLC---LYHGTQLDPHHNLHNSNIYDCQRCA 369
           +SC +C    YH ++++ H  LH  + Y C++C+
Sbjct: 807 YSCSVCQKGFYHKSEMEAHQKLHGQS-YSCEQCS 839


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 27,189,561
Number of Sequences: 53049
Number of extensions: 591809
Number of successful extensions: 1260
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 1220
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1258
length of database: 24,988,368
effective HSP length: 82
effective length of database: 20,638,350
effective search space used: 2497240350
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)