Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmmt24m04
(346 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
DQ118293-1|AAZ99029.1| 2391|Homo sapiens filaggrin 2 protein. 29 3.9
BC034942-1|AAH34942.1| 660|Homo sapiens DDX3Y protein protein. 29 3.9
BC007861-1|AAH07861.1| 199|Homo sapiens KIAA1450 protein protein. 29 3.9
AY827490-1|AAX12417.1| 2391|Homo sapiens ifapsoriasin protein. 29 3.9
AL356504-2|CAC13173.2| 2391|Homo sapiens filaggrin 2 protein. 29 3.9
AK022968-1|BAB14338.1| 440|Homo sapiens protein ( Homo sapiens ... 29 5.2
AB040883-1|BAA95974.1| 1139|Homo sapiens KIAA1450 protein protein. 29 5.2
AF000985-1|AAC51832.1| 660|Homo sapiens dead box, Y isoform pro... 28 6.8
AF000984-1|AAC51831.1| 660|Homo sapiens dead box, Y isoform pro... 28 6.8
X55721-1|CAA39253.1| 836|Homo sapiens granulocyte colony stimul... 28 9.0
X55720-1|CAA39252.1| 783|Homo sapiens granulocyte colony stimul... 28 9.0
U93868-1|AAB63676.1| 233|Homo sapiens RNA polymerase III subuni... 28 9.0
U93239-1|AAB51391.1| 399|Homo sapiens Sec62 protein. 28 9.0
M59820-1|AAA63178.1| 863|Homo sapiens granulocyte colony-stimul... 28 9.0
M59819-1|AAA63177.1| 771|Homo sapiens granulocyte colony-stimul... 28 9.0
M59818-1|AAA63176.1| 836|Homo sapiens granulocyte colony-stimul... 28 9.0
D87127-1|BAA13254.1| 399|Homo sapiens translocation protein-1 p... 28 9.0
DQ424902-1|ABD83667.1| 836|Homo sapiens granulocyte colony-stim... 28 9.0
BC053585-1|AAH53585.1| 836|Homo sapiens colony stimulating fact... 28 9.0
BC012035-1|AAH12035.1| 399|Homo sapiens TLOC1 protein protein. 28 9.0
AY148100-1|AAN05790.1| 836|Homo sapiens colony stimulating fact... 28 9.0
AB024586-1|BAB12685.1| 399|Homo sapiens translocation protein 1... 28 9.0
>DQ118293-1|AAZ99029.1| 2391|Homo sapiens filaggrin 2 protein.
Length = 2391
Score = 29.1 bits (62), Expect = 3.9
Identities = 18/54 (33%), Positives = 27/54 (50%), Gaps = 2/54 (3%)
Frame = -1
Query: 214 GLGKSDSGSRDDRGTNNYGLDDFGEDRAGELHGFRNVDFRKY--GSGENNNFGQ 59
G G S S G+N+ FG+ R G ++ F +Y GSG+++ FGQ
Sbjct: 1080 GSGSSQSSGYGQHGSNSGQTSGFGQHRPG---SGQSSGFGQYGSGSGQSSGFGQ 1130
>BC034942-1|AAH34942.1| 660|Homo sapiens DDX3Y protein protein.
Length = 660
Score = 29.1 bits (62), Expect = 3.9
Identities = 20/70 (28%), Positives = 29/70 (41%), Gaps = 5/70 (7%)
Frame = -1
Query: 208 GKSDSGSRDDRGTNNYGLDDFGEDRAGELHGF---RNVDFRKYGSGENNN--FGQRLFGN 44
G S S+ +R + +G D+ + GF R R G G N+ FG +G
Sbjct: 580 GGSRGRSKSNRFSGGFGARDYRQSSGSSSSGFGASRGSSSRSGGGGYGNSRGFGGGGYGG 639
Query: 43 VLNINGISGN 14
N +G GN
Sbjct: 640 FYNSDGYGGN 649
>BC007861-1|AAH07861.1| 199|Homo sapiens KIAA1450 protein protein.
Length = 199
Score = 29.1 bits (62), Expect = 3.9
Identities = 19/55 (34%), Positives = 28/55 (50%)
Frame = -1
Query: 217 EGLGKSDSGSRDDRGTNNYGLDDFGEDRAGELHGFRNVDFRKYGSGENNNFGQRL 53
E G+SD G +DRG+ N D D AG+L ++ +G+G G+RL
Sbjct: 2 EDEGESDKGFAEDRGSRN----DMAADIAGQLSHAADLGTASHGAGGTG--GRRL 50
>AY827490-1|AAX12417.1| 2391|Homo sapiens ifapsoriasin protein.
Length = 2391
Score = 29.1 bits (62), Expect = 3.9
Identities = 18/54 (33%), Positives = 27/54 (50%), Gaps = 2/54 (3%)
Frame = -1
Query: 214 GLGKSDSGSRDDRGTNNYGLDDFGEDRAGELHGFRNVDFRKY--GSGENNNFGQ 59
G G S S G+N+ FG+ R G ++ F +Y GSG+++ FGQ
Sbjct: 1080 GSGSSQSSGYGQHGSNSGQTSGFGQHRPG---SGQSSGFGQYGSGSGQSSGFGQ 1130
>AL356504-2|CAC13173.2| 2391|Homo sapiens filaggrin 2 protein.
Length = 2391
Score = 29.1 bits (62), Expect = 3.9
Identities = 18/54 (33%), Positives = 27/54 (50%), Gaps = 2/54 (3%)
Frame = -1
Query: 214 GLGKSDSGSRDDRGTNNYGLDDFGEDRAGELHGFRNVDFRKY--GSGENNNFGQ 59
G G S S G+N+ FG+ R G ++ F +Y GSG+++ FGQ
Sbjct: 1080 GSGSSQSSGYGQHGSNSGQTSGFGQHRPG---SGQSSGFGQYGSGSGQSSGFGQ 1130
>AK022968-1|BAB14338.1| 440|Homo sapiens protein ( Homo sapiens
cDNA FLJ12906 fis, clone NT2RP2004373. ).
Length = 440
Score = 28.7 bits (61), Expect = 5.2
Identities = 18/52 (34%), Positives = 27/52 (51%)
Frame = -1
Query: 208 GKSDSGSRDDRGTNNYGLDDFGEDRAGELHGFRNVDFRKYGSGENNNFGQRL 53
G+SD G +DRG+ N D D AG+L ++ +G+G G+RL
Sbjct: 115 GESDKGFAEDRGSRN----DMAADIAGQLSHAADLGTASHGAGGTG--GRRL 160
>AB040883-1|BAA95974.1| 1139|Homo sapiens KIAA1450 protein protein.
Length = 1139
Score = 28.7 bits (61), Expect = 5.2
Identities = 18/52 (34%), Positives = 27/52 (51%)
Frame = -1
Query: 208 GKSDSGSRDDRGTNNYGLDDFGEDRAGELHGFRNVDFRKYGSGENNNFGQRL 53
G+SD G +DRG+ N D D AG+L ++ +G+G G+RL
Sbjct: 814 GESDKGFAEDRGSRN----DMAADIAGQLSHAADLGTASHGAGGTG--GRRL 859
>AF000985-1|AAC51832.1| 660|Homo sapiens dead box, Y isoform
protein.
Length = 660
Score = 28.3 bits (60), Expect = 6.8
Identities = 19/70 (27%), Positives = 29/70 (41%), Gaps = 5/70 (7%)
Frame = -1
Query: 208 GKSDSGSRDDRGTNNYGLDDFGEDRAGELHGF---RNVDFRKYGSG--ENNNFGQRLFGN 44
G S S+ +R + +G D+ + GF R R G G ++ FG +G
Sbjct: 580 GGSRGRSKSNRFSGGFGARDYRQSSGSSSSGFGASRGSSSRSGGGGYGDSRGFGGGGYGG 639
Query: 43 VLNINGISGN 14
N +G GN
Sbjct: 640 FYNSDGYGGN 649
>AF000984-1|AAC51831.1| 660|Homo sapiens dead box, Y isoform
protein.
Length = 660
Score = 28.3 bits (60), Expect = 6.8
Identities = 19/70 (27%), Positives = 29/70 (41%), Gaps = 5/70 (7%)
Frame = -1
Query: 208 GKSDSGSRDDRGTNNYGLDDFGEDRAGELHGF---RNVDFRKYGSG--ENNNFGQRLFGN 44
G S S+ +R + +G D+ + GF R R G G ++ FG +G
Sbjct: 580 GGSRGRSKSNRFSGGFGARDYRQSSGSSSSGFGASRGSSSRSGGGGYGDSRGFGGGGYGG 639
Query: 43 VLNINGISGN 14
N +G GN
Sbjct: 640 FYNSDGYGGN 649
>X55721-1|CAA39253.1| 836|Homo sapiens granulocyte colony
stimulating factor receptor 25-1 protein.
Length = 836
Score = 27.9 bits (59), Expect = 9.0
Identities = 11/36 (30%), Positives = 18/36 (50%), Gaps = 4/36 (11%)
Frame = +1
Query: 124 APQPCPPRSRQARNCWYPYHPG----SRCHSSRDPQ 219
+P+ PP++ + CW P+ PG +C PQ
Sbjct: 238 SPEAAPPQAGCLQLCWEPWQPGLHINQKCELRHKPQ 273
>X55720-1|CAA39252.1| 783|Homo sapiens granulocyte colony
stimulating factor receptor D-7 protein.
Length = 783
Score = 27.9 bits (59), Expect = 9.0
Identities = 11/36 (30%), Positives = 18/36 (50%), Gaps = 4/36 (11%)
Frame = +1
Query: 124 APQPCPPRSRQARNCWYPYHPG----SRCHSSRDPQ 219
+P+ PP++ + CW P+ PG +C PQ
Sbjct: 238 SPEAAPPQAGCLQLCWEPWQPGLHINQKCELRHKPQ 273
>U93868-1|AAB63676.1| 233|Homo sapiens RNA polymerase III subunit
protein.
Length = 233
Score = 27.9 bits (59), Expect = 9.0
Identities = 10/18 (55%), Positives = 14/18 (77%)
Frame = +2
Query: 53 EPLPEVVILPTPVFPEID 106
E LP+VV+ P P+FP+ D
Sbjct: 25 EKLPDVVLKPPPLFPDTD 42
>U93239-1|AAB51391.1| 399|Homo sapiens Sec62 protein.
Length = 399
Score = 27.9 bits (59), Expect = 9.0
Identities = 17/52 (32%), Positives = 26/52 (50%), Gaps = 5/52 (9%)
Frame = -1
Query: 205 KSDSGSRDDR----GTNNYGLDDFGEDRAGELHGFRNVDFR-KYGSGENNNF 65
KSDS ++D G N+G + G +R + R D R ++ SG N+F
Sbjct: 312 KSDSEKKEDEEGKVGPGNHGTEGSGGERHSDTDSDRREDDRSQHSSGNGNDF 363
>M59820-1|AAA63178.1| 863|Homo sapiens granulocyte
colony-stimulating factor receptor protein.
Length = 863
Score = 27.9 bits (59), Expect = 9.0
Identities = 11/36 (30%), Positives = 18/36 (50%), Gaps = 4/36 (11%)
Frame = +1
Query: 124 APQPCPPRSRQARNCWYPYHPG----SRCHSSRDPQ 219
+P+ PP++ + CW P+ PG +C PQ
Sbjct: 238 SPEAAPPQAGCLQLCWEPWQPGLHINQKCELRHKPQ 273
>M59819-1|AAA63177.1| 771|Homo sapiens granulocyte
colony-stimulating factor receptor protein.
Length = 771
Score = 27.9 bits (59), Expect = 9.0
Identities = 11/36 (30%), Positives = 18/36 (50%), Gaps = 4/36 (11%)
Frame = +1
Query: 124 APQPCPPRSRQARNCWYPYHPG----SRCHSSRDPQ 219
+P+ PP++ + CW P+ PG +C PQ
Sbjct: 238 SPEAAPPQAGCLQLCWEPWQPGLHINQKCELRHKPQ 273
>M59818-1|AAA63176.1| 836|Homo sapiens granulocyte
colony-stimulating factor receptor protein.
Length = 836
Score = 27.9 bits (59), Expect = 9.0
Identities = 11/36 (30%), Positives = 18/36 (50%), Gaps = 4/36 (11%)
Frame = +1
Query: 124 APQPCPPRSRQARNCWYPYHPG----SRCHSSRDPQ 219
+P+ PP++ + CW P+ PG +C PQ
Sbjct: 238 SPEAAPPQAGCLQLCWEPWQPGLHINQKCELRHKPQ 273
>D87127-1|BAA13254.1| 399|Homo sapiens translocation protein-1
protein.
Length = 399
Score = 27.9 bits (59), Expect = 9.0
Identities = 17/52 (32%), Positives = 26/52 (50%), Gaps = 5/52 (9%)
Frame = -1
Query: 205 KSDSGSRDDR----GTNNYGLDDFGEDRAGELHGFRNVDFR-KYGSGENNNF 65
KSDS ++D G N+G + G +R + R D R ++ SG N+F
Sbjct: 312 KSDSEKKEDEEGKVGPGNHGTEGSGGERHSDTDSDRREDDRSQHSSGNGNDF 363
>DQ424902-1|ABD83667.1| 836|Homo sapiens granulocyte
colony-stimulating factor receptor protein.
Length = 836
Score = 27.9 bits (59), Expect = 9.0
Identities = 11/36 (30%), Positives = 18/36 (50%), Gaps = 4/36 (11%)
Frame = +1
Query: 124 APQPCPPRSRQARNCWYPYHPG----SRCHSSRDPQ 219
+P+ PP++ + CW P+ PG +C PQ
Sbjct: 238 SPEAAPPQAGCLQLCWEPWQPGLHINQKCELRHKPQ 273
>BC053585-1|AAH53585.1| 836|Homo sapiens colony stimulating factor
3 receptor (granulocyte) protein.
Length = 836
Score = 27.9 bits (59), Expect = 9.0
Identities = 11/36 (30%), Positives = 18/36 (50%), Gaps = 4/36 (11%)
Frame = +1
Query: 124 APQPCPPRSRQARNCWYPYHPG----SRCHSSRDPQ 219
+P+ PP++ + CW P+ PG +C PQ
Sbjct: 238 SPEAAPPQAGCLQLCWEPWQPGLHINQKCELRHKPQ 273
>BC012035-1|AAH12035.1| 399|Homo sapiens TLOC1 protein protein.
Length = 399
Score = 27.9 bits (59), Expect = 9.0
Identities = 17/52 (32%), Positives = 26/52 (50%), Gaps = 5/52 (9%)
Frame = -1
Query: 205 KSDSGSRDDR----GTNNYGLDDFGEDRAGELHGFRNVDFR-KYGSGENNNF 65
KSDS ++D G N+G + G +R + R D R ++ SG N+F
Sbjct: 312 KSDSEKKEDEEGKVGPGNHGTEGSGGERHSDTDSDRREDDRSQHSSGNGNDF 363
>AY148100-1|AAN05790.1| 836|Homo sapiens colony stimulating factor
3 receptor (granulocyte) protein.
Length = 836
Score = 27.9 bits (59), Expect = 9.0
Identities = 11/36 (30%), Positives = 18/36 (50%), Gaps = 4/36 (11%)
Frame = +1
Query: 124 APQPCPPRSRQARNCWYPYHPG----SRCHSSRDPQ 219
+P+ PP++ + CW P+ PG +C PQ
Sbjct: 238 SPEAAPPQAGCLQLCWEPWQPGLHINQKCELRHKPQ 273
>AB024586-1|BAB12685.1| 399|Homo sapiens translocation protein 1
protein.
Length = 399
Score = 27.9 bits (59), Expect = 9.0
Identities = 17/52 (32%), Positives = 26/52 (50%), Gaps = 5/52 (9%)
Frame = -1
Query: 205 KSDSGSRDDR----GTNNYGLDDFGEDRAGELHGFRNVDFR-KYGSGENNNF 65
KSDS ++D G N+G + G +R + R D R ++ SG N+F
Sbjct: 312 KSDSEKKEDEEGKVGPGNHGTEGSGGERHSDTDSDRREDDRSQHSSGNGNDF 363
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 41,642,193
Number of Sequences: 237096
Number of extensions: 857030
Number of successful extensions: 2161
Number of sequences better than 10.0: 22
Number of HSP's better than 10.0 without gapping: 2058
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2158
length of database: 76,859,062
effective HSP length: 80
effective length of database: 57,891,382
effective search space used: 1968306988
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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