Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmmt24l19
(690 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BC020490-1|AAH20490.1| 223|Homo sapiens twisted gastrulation ho... 53 1e-06
AJ297391-1|CAC05581.1| 223|Homo sapiens twisted gastrulation pr... 53 1e-06
AF294628-1|AAG10076.1| 223|Homo sapiens twisted gastrulation pr... 53 1e-06
AF196834-1|AAG43468.1| 223|Homo sapiens twisted gastrulation-li... 53 1e-06
AK075550-1|BAC11693.1| 223|Homo sapiens protein ( Homo sapiens ... 50 6e-06
AK027629-1|BAB55246.1| 148|Homo sapiens protein ( Homo sapiens ... 40 0.008
Z15005-1|CAA78727.1| 2663|Homo sapiens CENP-E protein. 34 0.55
AB209996-1|BAE06078.1| 2585|Homo sapiens CENPE variant protein p... 34 0.55
D63998-1|BAA10017.1| 1143|Homo sapiens golgi alpha-mannosidaseII... 32 2.2
>BC020490-1|AAH20490.1| 223|Homo sapiens twisted gastrulation
homolog 1 (Drosophila) protein.
Length = 223
Score = 52.8 bits (121), Expect = 1e-06
Identities = 35/117 (29%), Positives = 54/117 (46%), Gaps = 2/117 (1%)
Frame = +2
Query: 284 IVALICVVPIAYACNEAICASVVSKCMLTQXXXXXXXXXXXXXXXXXXXXXXXXXXXXX- 460
I+ + +P + +CN+A+CAS VSKC++ +
Sbjct: 13 ILMFLTWLPESLSCNKALCASDVSKCLIQELCQCRPGEGNCSCCKECMLCLGALWDECCD 72
Query: 461 -VDMCPKPNDTQTELSKTSYVEELGDGVPGLFAALTSDPDAQQRWLSMTYPVDIDLS 628
V MC N + T + S VEEL + +P LF ALT + D Q W +++PV +LS
Sbjct: 73 CVGMCNPRNYSDTPPTSKSTVEELHEPIPSLFRALT-EGDTQLNWNIVSFPVAEELS 128
>AJ297391-1|CAC05581.1| 223|Homo sapiens twisted gastrulation
protein protein.
Length = 223
Score = 52.8 bits (121), Expect = 1e-06
Identities = 35/117 (29%), Positives = 54/117 (46%), Gaps = 2/117 (1%)
Frame = +2
Query: 284 IVALICVVPIAYACNEAICASVVSKCMLTQXXXXXXXXXXXXXXXXXXXXXXXXXXXXX- 460
I+ + +P + +CN+A+CAS VSKC++ +
Sbjct: 13 ILMFLTWLPESLSCNKALCASDVSKCLIQELCQCRPGEGNCSCCKECMLCLGALWDECCD 72
Query: 461 -VDMCPKPNDTQTELSKTSYVEELGDGVPGLFAALTSDPDAQQRWLSMTYPVDIDLS 628
V MC N + T + S VEEL + +P LF ALT + D Q W +++PV +LS
Sbjct: 73 CVGMCNPRNYSDTPPTSKSTVEELHEPIPSLFRALT-EGDTQLNWNIVSFPVAEELS 128
>AF294628-1|AAG10076.1| 223|Homo sapiens twisted gastrulation
protein precursor protein.
Length = 223
Score = 52.8 bits (121), Expect = 1e-06
Identities = 35/117 (29%), Positives = 54/117 (46%), Gaps = 2/117 (1%)
Frame = +2
Query: 284 IVALICVVPIAYACNEAICASVVSKCMLTQXXXXXXXXXXXXXXXXXXXXXXXXXXXXX- 460
I+ + +P + +CN+A+CAS VSKC++ +
Sbjct: 13 ILMFLTWLPESLSCNKALCASDVSKCLIQELCQCRPGEGNCSCCKECMLCLGALWDECCD 72
Query: 461 -VDMCPKPNDTQTELSKTSYVEELGDGVPGLFAALTSDPDAQQRWLSMTYPVDIDLS 628
V MC N + T + S VEEL + +P LF ALT + D Q W +++PV +LS
Sbjct: 73 CVGMCNPRNYSDTPPTSKSTVEELHEPIPSLFRALT-EGDTQLNWNIVSFPVAEELS 128
>AF196834-1|AAG43468.1| 223|Homo sapiens twisted gastrulation-like
protein precursor protein.
Length = 223
Score = 52.8 bits (121), Expect = 1e-06
Identities = 35/117 (29%), Positives = 54/117 (46%), Gaps = 2/117 (1%)
Frame = +2
Query: 284 IVALICVVPIAYACNEAICASVVSKCMLTQXXXXXXXXXXXXXXXXXXXXXXXXXXXXX- 460
I+ + +P + +CN+A+CAS VSKC++ +
Sbjct: 13 ILMFLTWLPESLSCNKALCASDVSKCLIQELCQCRPGEGNCSCCKECMLCLGALWDECCD 72
Query: 461 -VDMCPKPNDTQTELSKTSYVEELGDGVPGLFAALTSDPDAQQRWLSMTYPVDIDLS 628
V MC N + T + S VEEL + +P LF ALT + D Q W +++PV +LS
Sbjct: 73 CVGMCNPRNYSDTPPTSKSTVEELHEPIPSLFRALT-EGDTQLNWNIVSFPVAEELS 128
>AK075550-1|BAC11693.1| 223|Homo sapiens protein ( Homo sapiens
cDNA PSEC0250 fis, clone NT2RP3001874, highly similar to
Twisted gastrulation. ).
Length = 223
Score = 50.4 bits (115), Expect = 6e-06
Identities = 34/117 (29%), Positives = 53/117 (45%), Gaps = 2/117 (1%)
Frame = +2
Query: 284 IVALICVVPIAYACNEAICASVVSKCMLTQXXXXXXXXXXXXXXXXXXXXXXXXXXXXX- 460
I+ + +P + +CN+A+CAS SKC++ +
Sbjct: 13 ILMFLTWLPESLSCNKALCASDESKCLIQELCQCRPGEGNCSCCKECMLCLGALWDECCD 72
Query: 461 -VDMCPKPNDTQTELSKTSYVEELGDGVPGLFAALTSDPDAQQRWLSMTYPVDIDLS 628
V MC N + T + S VEEL + +P LF ALT + D Q W +++PV +LS
Sbjct: 73 CVGMCNPRNYSDTPPTSKSTVEELHEPIPSLFRALT-EGDTQLNWNIVSFPVAEELS 128
>AK027629-1|BAB55246.1| 148|Homo sapiens protein ( Homo sapiens
cDNA FLJ14723 fis, clone NT2RP3001708, weakly similar to
TWISTED GASTRULATION PROTEIN PRECURSOR. ).
Length = 148
Score = 39.9 bits (89), Expect = 0.008
Identities = 22/54 (40%), Positives = 31/54 (57%)
Frame = +2
Query: 467 MCPKPNDTQTELSKTSYVEELGDGVPGLFAALTSDPDAQQRWLSMTYPVDIDLS 628
MC N + T + S VEEL + +P LF ALT + D Q W +++PV +LS
Sbjct: 1 MCNPRNYSDTPPTSKSTVEELHEPIPSLFRALT-EGDTQLNWNIVSFPVAEELS 53
>Z15005-1|CAA78727.1| 2663|Homo sapiens CENP-E protein.
Length = 2663
Score = 33.9 bits (74), Expect = 0.55
Identities = 16/30 (53%), Positives = 23/30 (76%), Gaps = 1/30 (3%)
Frame = -1
Query: 435 ELRQLKQSLQHEQS-FKSHLHDWVNMHFDT 349
+L+QL++SLQ E+ KS +HD VNM+ DT
Sbjct: 933 DLKQLQESLQIERDQLKSDIHDTVNMNIDT 962
>AB209996-1|BAE06078.1| 2585|Homo sapiens CENPE variant protein
protein.
Length = 2585
Score = 33.9 bits (74), Expect = 0.55
Identities = 16/30 (53%), Positives = 23/30 (76%), Gaps = 1/30 (3%)
Frame = -1
Query: 435 ELRQLKQSLQHEQS-FKSHLHDWVNMHFDT 349
+L+QL++SLQ E+ KS +HD VNM+ DT
Sbjct: 913 DLKQLQESLQIERDQLKSDIHDTVNMNIDT 942
>D63998-1|BAA10017.1| 1143|Homo sapiens golgi alpha-mannosidaseII
protein.
Length = 1143
Score = 31.9 bits (69), Expect = 2.2
Identities = 25/96 (26%), Positives = 41/96 (42%), Gaps = 4/96 (4%)
Frame = -1
Query: 468 ISTQLQHSLYKELRQLKQSL---QHEQSFKSHLHDWVNMHFDTTLAHIASLHAYAIGTTQ 298
I+ L SLY L + +++L QH + DWV + + T L H + IG +
Sbjct: 544 INKFLSSSLYTALTEARRNLGLFQHHDAITGTAKDWVVVDYGTRLFHSLMVLEKIIGNSA 603
Query: 297 ISATIK*DLLHMARFNETIKEC-LKNKQRSNFKDVN 193
+K L + + +T E LK K + + N
Sbjct: 604 FLLILKDKLTYDSYSPDTFLEMDLKQKSQDSLPQKN 639
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 86,321,285
Number of Sequences: 237096
Number of extensions: 1625920
Number of successful extensions: 4160
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 4038
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4160
length of database: 76,859,062
effective HSP length: 88
effective length of database: 55,994,614
effective search space used: 7895240574
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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