Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmmt24k01
(324 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPBC530.10c |anc1||adenine nucleotide carrier Anc1|Schizosacchar... 49 2e-07
SPAC328.09 |||2-oxoadipate and 2-oxoglutarate transporter |Schiz... 33 0.008
SPAC19G12.05 |||mitochondrial citrate transporter|Schizosaccharo... 33 0.008
SPAC4G9.20c |||mitochondrial carrier with solute carrier repeats... 30 0.075
SPAC227.03c |||mitochondrial NAD+ transporter|Schizosaccharomyce... 30 0.100
SPAC139.02c |oac1||anion transporter|Schizosaccharomyces pombe|c... 29 0.13
SPAPB17E12.12c |||mitochondrial transporter|Schizosaccharomyces ... 29 0.17
SPAC8C9.12c |||iron ion transporter |Schizosaccharomyces pombe|c... 28 0.30
SPCC1442.03 ||SPCC1450.19|ATP-Mg/Pi carrier homolog|Schizosaccha... 28 0.40
SPBC12D12.05c |||mitochondrial carrier, calcium binding subfamil... 27 0.70
SPAC823.10c |||mitochondrial carrier with solute carrier repeats... 27 0.93
SPAC23A1.17 |||WIP homolog|Schizosaccharomyces pombe|chr 1|||Manual 26 1.6
SPAC688.09 |||pyrimidine nucletide transporter |Schizosaccharomy... 25 2.1
SPBC83.03c |tas3||RITS complex subunit 3 |Schizosaccharomyces po... 25 3.7
SPAC57A7.11 |mip1||WD repeat protein Mip1|Schizosaccharomyces po... 24 4.9
SPBC146.01 |med15|SPBP35G2.15|mediator complex subunit Med15 |Sc... 24 4.9
SPCC550.09 |||peroxin Pex32 |Schizosaccharomyces pombe|chr 3|||M... 24 6.5
SPAC6F6.06c |rax2||cell polarity factor Rax2|Schizosaccharomyces... 23 8.6
SPBC21C3.14c |||sequence orphan|Schizosaccharomyces pombe|chr 2|... 23 8.6
>SPBC530.10c |anc1||adenine nucleotide carrier
Anc1|Schizosaccharomyces pombe|chr 2|||Manual
Length = 322
Score = 48.8 bits (111), Expect = 2e-07
Identities = 20/50 (40%), Positives = 32/50 (64%)
Frame = +2
Query: 26 ILYKNTIHCWATIAKTEGTSAFFKGAFSNVLRGTGGAFVLVLYDEIKKVL 175
+ Y ++ C I EG +FFKGA +N+LRG GA VL +YD+++ ++
Sbjct: 268 VKYSSSFECGRQILAKEGARSFFKGAGANILRGVAGAGVLSIYDQVQLLM 317
Score = 24.6 bits (51), Expect = 3.7
Identities = 11/30 (36%), Positives = 16/30 (53%)
Frame = +2
Query: 32 YKNTIHCWATIAKTEGTSAFFKGAFSNVLR 121
YK C+ A EG + ++G +NVLR
Sbjct: 71 YKGIGECFKRTAAEEGVISLWRGNTANVLR 100
>SPAC328.09 |||2-oxoadipate and 2-oxoglutarate transporter
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 298
Score = 33.5 bits (73), Expect = 0.008
Identities = 15/36 (41%), Positives = 24/36 (66%), Gaps = 1/36 (2%)
Frame = +2
Query: 59 TIAKTEGTSAFFKGAFSNVLR-GTGGAFVLVLYDEI 163
T+A+ EG +A +KG VLR G GG +LV+++ +
Sbjct: 249 TVAREEGFTALYKGFVPKVLRLGPGGGILLVVFNSV 284
>SPAC19G12.05 |||mitochondrial citrate
transporter|Schizosaccharomyces pombe|chr 1|||Manual
Length = 291
Score = 33.5 bits (73), Expect = 0.008
Identities = 16/49 (32%), Positives = 26/49 (53%), Gaps = 1/49 (2%)
Frame = +2
Query: 32 YKNTIHCWATIAKTEGTSAFFKGAFSNVLR-GTGGAFVLVLYDEIKKVL 175
YKN+IHC I +G F+ GA + R G V +Y+++ ++L
Sbjct: 240 YKNSIHCAYKILTQDGLLRFWSGATPRLARLILSGGIVFTVYEKVMEIL 288
>SPAC4G9.20c |||mitochondrial carrier with solute carrier
repeats|Schizosaccharomyces pombe|chr 1|||Manual
Length = 302
Score = 30.3 bits (65), Expect = 0.075
Identities = 11/24 (45%), Positives = 16/24 (66%)
Frame = +2
Query: 29 LYKNTIHCWATIAKTEGTSAFFKG 100
+Y N + C I+K EG +AF+KG
Sbjct: 54 IYNNALDCVKKISKNEGLAAFYKG 77
>SPAC227.03c |||mitochondrial NAD+ transporter|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 371
Score = 29.9 bits (64), Expect = 0.100
Identities = 15/48 (31%), Positives = 22/48 (45%)
Frame = +2
Query: 32 YKNTIHCWATIAKTEGTSAFFKGAFSNVLRGTGGAFVLVLYDEIKKVL 175
Y NT + I K EG +AF++G F ++ LY+ K L
Sbjct: 230 YNNTFDAFRKIYKYEGLAAFYRGLFPSLFGTLHVGIQFPLYEYFKSFL 277
>SPAC139.02c |oac1||anion transporter|Schizosaccharomyces pombe|chr
1|||Manual
Length = 320
Score = 29.5 bits (63), Expect = 0.13
Identities = 15/49 (30%), Positives = 27/49 (55%), Gaps = 1/49 (2%)
Frame = +2
Query: 32 YKNTIHCWATIAKTEGTSAFFKGAFSNVLRGTGGAFV-LVLYDEIKKVL 175
YK+ + ++ I K G F GA + +LR G+ V L +Y+ K+++
Sbjct: 171 YKHIFNAFSRIIKENGVKGLFVGADAAILRTVSGSSVQLPIYNWAKRMI 219
Score = 27.5 bits (58), Expect = 0.53
Identities = 13/35 (37%), Positives = 20/35 (57%)
Frame = +2
Query: 17 KSDILYKNTIHCWATIAKTEGTSAFFKGAFSNVLR 121
K+ LYKN I C ++EG A +KG +++ R
Sbjct: 261 KNKELYKNPIDCILKTIRSEGFFALYKGFGAHLAR 295
>SPAPB17E12.12c |||mitochondrial transporter|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 317
Score = 29.1 bits (62), Expect = 0.17
Identities = 14/30 (46%), Positives = 18/30 (60%)
Frame = +2
Query: 32 YKNTIHCWATIAKTEGTSAFFKGAFSNVLR 121
YKN I KTEG + FF+G SN+L+
Sbjct: 266 YKNIKSAIFHIYKTEGINGFFRGYSSNMLK 295
>SPAC8C9.12c |||iron ion transporter |Schizosaccharomyces pombe|chr
1|||Manual
Length = 303
Score = 28.3 bits (60), Expect = 0.30
Identities = 9/21 (42%), Positives = 14/21 (66%)
Frame = +2
Query: 32 YKNTIHCWATIAKTEGTSAFF 94
YK+ +HC T+ + EG AF+
Sbjct: 148 YKSALHCATTVFRNEGLGAFY 168
>SPCC1442.03 ||SPCC1450.19|ATP-Mg/Pi carrier
homolog|Schizosaccharomyces pombe|chr 3|||Manual
Length = 338
Score = 27.9 bits (59), Expect = 0.40
Identities = 14/38 (36%), Positives = 22/38 (57%), Gaps = 1/38 (2%)
Frame = +2
Query: 62 IAKTEGTSAFFKGAFSNVLRGTG-GAFVLVLYDEIKKV 172
IAK EG FF G + +LR F L+ Y+++++V
Sbjct: 165 IAKQEGMKTFFYGYRATILRDIPFSGFQLLFYEKLRQV 202
>SPBC12D12.05c |||mitochondrial carrier, calcium binding
subfamily|Schizosaccharomyces pombe|chr 2|||Manual
Length = 426
Score = 27.1 bits (57), Expect = 0.70
Identities = 16/57 (28%), Positives = 24/57 (42%), Gaps = 1/57 (1%)
Frame = +2
Query: 8 GRAKSDILYKNTIHCWATIAKTEGTSAFFKGAFSNVLR-GTGGAFVLVLYDEIKKVL 175
G + Y I C+ K EG +KG N+L+ A ++Y+ KK L
Sbjct: 367 GTSAHPATYDGFIDCFYKTTKNEGFRGLYKGLSPNLLKVAPSVAISYLVYENCKKWL 423
>SPAC823.10c |||mitochondrial carrier with solute carrier
repeats|Schizosaccharomyces pombe|chr 1|||Manual
Length = 296
Score = 26.6 bits (56), Expect = 0.93
Identities = 12/31 (38%), Positives = 15/31 (48%)
Frame = +2
Query: 29 LYKNTIHCWATIAKTEGTSAFFKGAFSNVLR 121
+YKN +H + EG F G F VLR
Sbjct: 244 IYKNFLHSAKLVYANEGFRGFLDGFFLRVLR 274
>SPAC23A1.17 |||WIP homolog|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1611
Score = 25.8 bits (54), Expect = 1.6
Identities = 10/19 (52%), Positives = 14/19 (73%)
Frame = -1
Query: 150 KTSTKAPPVPLRTLEKAPL 94
K S+KAPPVPL + + P+
Sbjct: 1016 KLSSKAPPVPLPSADAPPI 1034
>SPAC688.09 |||pyrimidine nucletide transporter |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 361
Score = 25.4 bits (53), Expect = 2.1
Identities = 12/45 (26%), Positives = 22/45 (48%)
Frame = +2
Query: 32 YKNTIHCWATIAKTEGTSAFFKGAFSNVLRGTGGAFVLVLYDEIK 166
Y+++I C + EG +KG +++L VLY++ K
Sbjct: 202 YRSSIDCIIKTIRLEGFRGLYKGLSASLLGVGESTLQWVLYEKFK 246
>SPBC83.03c |tas3||RITS complex subunit 3 |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 549
Score = 24.6 bits (51), Expect = 3.7
Identities = 8/16 (50%), Positives = 13/16 (81%)
Frame = +1
Query: 4 VWSCQERYPVQEHHPL 51
V+S E++P+QE+ PL
Sbjct: 480 VFSASEKFPIQENQPL 495
>SPAC57A7.11 |mip1||WD repeat protein Mip1|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1313
Score = 24.2 bits (50), Expect = 4.9
Identities = 9/26 (34%), Positives = 17/26 (65%)
Frame = -3
Query: 316 LNHCITLYLTKNKLLKSFSCLIIHDL 239
L+HC++ + + LL+ ++CL I L
Sbjct: 623 LSHCLSHLNSPDSLLRQWACLCISQL 648
>SPBC146.01 |med15|SPBP35G2.15|mediator complex subunit Med15
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 1063
Score = 24.2 bits (50), Expect = 4.9
Identities = 14/34 (41%), Positives = 20/34 (58%)
Frame = +2
Query: 59 TIAKTEGTSAFFKGAFSNVLRGTGGAFVLVLYDE 160
TIAK EG + + A +N L+ AFV V ++E
Sbjct: 875 TIAKEEGMAKAREEAIANPLKYAIDAFVAVDHEE 908
>SPCC550.09 |||peroxin Pex32 |Schizosaccharomyces pombe|chr
3|||Manual
Length = 535
Score = 23.8 bits (49), Expect = 6.5
Identities = 13/41 (31%), Positives = 17/41 (41%)
Frame = -1
Query: 192 FLR*IYRTFLISSYKTSTKAPPVPLRTLEKAPLKKAEVPSV 70
F +Y F+I K K P P AP + + PSV
Sbjct: 307 FFNLLYEKFVIGKTKEPAKPVPQPSSNEPPAPSAENKQPSV 347
>SPAC6F6.06c |rax2||cell polarity factor Rax2|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1155
Score = 23.4 bits (48), Expect = 8.6
Identities = 10/44 (22%), Positives = 21/44 (47%)
Frame = +2
Query: 38 NTIHCWATIAKTEGTSAFFKGAFSNVLRGTGGAFVLVLYDEIKK 169
N ++ W + G S++F G F++ G+ + +Y E +
Sbjct: 586 NGLNGWVSYIYVSGDSSYFGGNFTHTGDGSIKLNYIAMYSETSR 629
>SPBC21C3.14c |||sequence orphan|Schizosaccharomyces pombe|chr
2|||Manual
Length = 841
Score = 23.4 bits (48), Expect = 8.6
Identities = 9/33 (27%), Positives = 17/33 (51%)
Frame = -1
Query: 150 KTSTKAPPVPLRTLEKAPLKKAEVPSVLAMVAQ 52
+T + PVP+ E+ P + +PS + +Q
Sbjct: 283 RTKSVETPVPMEAAEEEPATEYSIPSSVTFNSQ 315
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 1,085,378
Number of Sequences: 5004
Number of extensions: 15577
Number of successful extensions: 66
Number of sequences better than 10.0: 19
Number of HSP's better than 10.0 without gapping: 64
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 66
length of database: 2,362,478
effective HSP length: 64
effective length of database: 2,042,222
effective search space used: 87815546
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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