Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmmt24j01
(670 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BC132972-1|AAI32973.1| 297|Homo sapiens ribosomal protein L5 pr... 198 1e-50
BC132970-1|AAI32971.1| 297|Homo sapiens ribosomal protein L5 pr... 198 1e-50
BC109370-1|AAI09371.1| 297|Homo sapiens ribosomal protein L5 pr... 198 1e-50
AL162740-1|CAI22505.1| 297|Homo sapiens ribosomal protein L5 pr... 198 1e-50
AK222604-1|BAD96324.1| 297|Homo sapiens ribosomal protein L5 va... 198 1e-50
AB208980-1|BAD92217.1| 303|Homo sapiens ribosomal protein L5 va... 198 1e-50
U14966-1|AAA85654.1| 297|Homo sapiens ribosomal protein L5 prot... 196 4e-50
BC001882-1|AAH01882.1| 101|Homo sapiens RPL5 protein protein. 192 1e-48
U76609-1|AAB18361.1| 145|Homo sapiens ribosomal L5 protein prot... 115 1e-25
AL162740-2|CAI22506.1| 126|Homo sapiens ribosomal protein L5 pr... 96 1e-19
X76061-1|CAA53661.1| 1139|Homo sapiens 130K protein protein. 32 2.1
X74594-1|CAA52671.1| 1082|Homo sapiens Rb2/p130 protein protein. 32 2.1
S67171-1|AAB29227.1| 1139|Homo sapiens p130 protein. 32 2.1
BX537767-1|CAD97830.1| 849|Homo sapiens hypothetical protein pr... 32 2.1
BC034490-1|AAH34490.1| 1139|Homo sapiens retinoblastoma-like 2 (... 32 2.1
>BC132972-1|AAI32973.1| 297|Homo sapiens ribosomal protein L5
protein.
Length = 297
Score = 198 bits (484), Expect = 1e-50
Identities = 87/102 (85%), Positives = 98/102 (96%)
Frame = +2
Query: 56 MGFVKVVKNKQYFKRYQVKFKRRREGKTDYYARKRLVVQDKNKYNTPKYRLIVRLSNKDV 235
MGFVKVVKNK YFKRYQVKF+RRREGKTDYYARKRLV+QDKNKYNTPKYR+IVR++N+D+
Sbjct: 1 MGFVKVVKNKAYFKRYQVKFRRRREGKTDYYARKRLVIQDKNKYNTPKYRMIVRVTNRDI 60
Query: 236 TCQVAYSRIEGDHIVCAAYSHELPRYGVKVGLTNYAAAYSTG 361
CQ+AY+RIEGD IVCAAY+HELP+YGVKVGLTNYAAAY TG
Sbjct: 61 ICQIAYARIEGDMIVCAAYAHELPKYGVKVGLTNYAAAYCTG 102
Score = 133 bits (322), Expect = 5e-31
Identities = 57/78 (73%), Positives = 70/78 (89%)
Frame = +1
Query: 436 CYLDVGLARTTTGARVFGAMKGAVDGGLNVPHSIKRFPGYDAESKKFNAEVHRAHIFGLH 615
CYLD GLARTTTG +VFGA+KGAVDGGL++PHS KRFPGYD+ESK+FNAEVHR HI G +
Sbjct: 144 CYLDAGLARTTTGNKVFGALKGAVDGGLSIPHSTKRFPGYDSESKEFNAEVHRKHIMGQN 203
Query: 616 VAEYMRSLEQDDEDSFKR 669
VA+YMR L ++DED++K+
Sbjct: 204 VADYMRYLMEEDEDAYKK 221
>BC132970-1|AAI32971.1| 297|Homo sapiens ribosomal protein L5
protein.
Length = 297
Score = 198 bits (484), Expect = 1e-50
Identities = 87/102 (85%), Positives = 98/102 (96%)
Frame = +2
Query: 56 MGFVKVVKNKQYFKRYQVKFKRRREGKTDYYARKRLVVQDKNKYNTPKYRLIVRLSNKDV 235
MGFVKVVKNK YFKRYQVKF+RRREGKTDYYARKRLV+QDKNKYNTPKYR+IVR++N+D+
Sbjct: 1 MGFVKVVKNKAYFKRYQVKFRRRREGKTDYYARKRLVIQDKNKYNTPKYRMIVRVTNRDI 60
Query: 236 TCQVAYSRIEGDHIVCAAYSHELPRYGVKVGLTNYAAAYSTG 361
CQ+AY+RIEGD IVCAAY+HELP+YGVKVGLTNYAAAY TG
Sbjct: 61 ICQIAYARIEGDMIVCAAYAHELPKYGVKVGLTNYAAAYCTG 102
Score = 133 bits (322), Expect = 5e-31
Identities = 57/78 (73%), Positives = 70/78 (89%)
Frame = +1
Query: 436 CYLDVGLARTTTGARVFGAMKGAVDGGLNVPHSIKRFPGYDAESKKFNAEVHRAHIFGLH 615
CYLD GLARTTTG +VFGA+KGAVDGGL++PHS KRFPGYD+ESK+FNAEVHR HI G +
Sbjct: 144 CYLDAGLARTTTGNKVFGALKGAVDGGLSIPHSTKRFPGYDSESKEFNAEVHRKHIMGQN 203
Query: 616 VAEYMRSLEQDDEDSFKR 669
VA+YMR L ++DED++K+
Sbjct: 204 VADYMRYLMEEDEDAYKK 221
>BC109370-1|AAI09371.1| 297|Homo sapiens ribosomal protein L5
protein.
Length = 297
Score = 198 bits (484), Expect = 1e-50
Identities = 87/102 (85%), Positives = 98/102 (96%)
Frame = +2
Query: 56 MGFVKVVKNKQYFKRYQVKFKRRREGKTDYYARKRLVVQDKNKYNTPKYRLIVRLSNKDV 235
MGFVKVVKNK YFKRYQVKF+RRREGKTDYYARKRLV+QDKNKYNTPKYR+IVR++N+D+
Sbjct: 1 MGFVKVVKNKAYFKRYQVKFRRRREGKTDYYARKRLVIQDKNKYNTPKYRMIVRVTNRDI 60
Query: 236 TCQVAYSRIEGDHIVCAAYSHELPRYGVKVGLTNYAAAYSTG 361
CQ+AY+RIEGD IVCAAY+HELP+YGVKVGLTNYAAAY TG
Sbjct: 61 ICQIAYARIEGDMIVCAAYAHELPKYGVKVGLTNYAAAYCTG 102
Score = 134 bits (323), Expect = 4e-31
Identities = 57/78 (73%), Positives = 70/78 (89%)
Frame = +1
Query: 436 CYLDVGLARTTTGARVFGAMKGAVDGGLNVPHSIKRFPGYDAESKKFNAEVHRAHIFGLH 615
CYLD GLARTTTG +VFGA+KGAVDGGL++PHS KRFPGYD+ESK+FNAEVHR HI G +
Sbjct: 144 CYLDAGLARTTTGNKVFGALKGAVDGGLSIPHSTKRFPGYDSESKEFNAEVHRKHIMGQN 203
Query: 616 VAEYMRSLEQDDEDSFKR 669
VA+YMR L ++DED++K+
Sbjct: 204 VADYMRCLMEEDEDAYKK 221
>AL162740-1|CAI22505.1| 297|Homo sapiens ribosomal protein L5
protein.
Length = 297
Score = 198 bits (484), Expect = 1e-50
Identities = 87/102 (85%), Positives = 98/102 (96%)
Frame = +2
Query: 56 MGFVKVVKNKQYFKRYQVKFKRRREGKTDYYARKRLVVQDKNKYNTPKYRLIVRLSNKDV 235
MGFVKVVKNK YFKRYQVKF+RRREGKTDYYARKRLV+QDKNKYNTPKYR+IVR++N+D+
Sbjct: 1 MGFVKVVKNKAYFKRYQVKFRRRREGKTDYYARKRLVIQDKNKYNTPKYRMIVRVTNRDI 60
Query: 236 TCQVAYSRIEGDHIVCAAYSHELPRYGVKVGLTNYAAAYSTG 361
CQ+AY+RIEGD IVCAAY+HELP+YGVKVGLTNYAAAY TG
Sbjct: 61 ICQIAYARIEGDMIVCAAYAHELPKYGVKVGLTNYAAAYCTG 102
Score = 133 bits (322), Expect = 5e-31
Identities = 57/78 (73%), Positives = 70/78 (89%)
Frame = +1
Query: 436 CYLDVGLARTTTGARVFGAMKGAVDGGLNVPHSIKRFPGYDAESKKFNAEVHRAHIFGLH 615
CYLD GLARTTTG +VFGA+KGAVDGGL++PHS KRFPGYD+ESK+FNAEVHR HI G +
Sbjct: 144 CYLDAGLARTTTGNKVFGALKGAVDGGLSIPHSTKRFPGYDSESKEFNAEVHRKHIMGQN 203
Query: 616 VAEYMRSLEQDDEDSFKR 669
VA+YMR L ++DED++K+
Sbjct: 204 VADYMRYLMEEDEDAYKK 221
>AK222604-1|BAD96324.1| 297|Homo sapiens ribosomal protein L5
variant protein.
Length = 297
Score = 198 bits (484), Expect = 1e-50
Identities = 87/102 (85%), Positives = 98/102 (96%)
Frame = +2
Query: 56 MGFVKVVKNKQYFKRYQVKFKRRREGKTDYYARKRLVVQDKNKYNTPKYRLIVRLSNKDV 235
MGFVKVVKNK YFKRYQVKF+RRREGKTDYYARKRLV+QDKNKYNTPKYR+IVR++N+D+
Sbjct: 1 MGFVKVVKNKAYFKRYQVKFRRRREGKTDYYARKRLVIQDKNKYNTPKYRMIVRVTNRDI 60
Query: 236 TCQVAYSRIEGDHIVCAAYSHELPRYGVKVGLTNYAAAYSTG 361
CQ+AY+RIEGD IVCAAY+HELP+YGVKVGLTNYAAAY TG
Sbjct: 61 ICQIAYARIEGDMIVCAAYAHELPKYGVKVGLTNYAAAYCTG 102
Score = 133 bits (322), Expect = 5e-31
Identities = 57/78 (73%), Positives = 70/78 (89%)
Frame = +1
Query: 436 CYLDVGLARTTTGARVFGAMKGAVDGGLNVPHSIKRFPGYDAESKKFNAEVHRAHIFGLH 615
CYLD GLARTTTG +VFGA+KGAVDGGL++PHS KRFPGYD+ESK+FNAEVHR HI G +
Sbjct: 144 CYLDAGLARTTTGNKVFGALKGAVDGGLSIPHSTKRFPGYDSESKEFNAEVHRKHIMGQN 203
Query: 616 VAEYMRSLEQDDEDSFKR 669
VA+YMR L ++DED++K+
Sbjct: 204 VADYMRYLMEEDEDAYKK 221
>AB208980-1|BAD92217.1| 303|Homo sapiens ribosomal protein L5
variant protein.
Length = 303
Score = 198 bits (484), Expect = 1e-50
Identities = 87/102 (85%), Positives = 98/102 (96%)
Frame = +2
Query: 56 MGFVKVVKNKQYFKRYQVKFKRRREGKTDYYARKRLVVQDKNKYNTPKYRLIVRLSNKDV 235
MGFVKVVKNK YFKRYQVKF+RRREGKTDYYARKRLV+QDKNKYNTPKYR+IVR++N+D+
Sbjct: 8 MGFVKVVKNKAYFKRYQVKFRRRREGKTDYYARKRLVIQDKNKYNTPKYRMIVRVTNRDI 67
Query: 236 TCQVAYSRIEGDHIVCAAYSHELPRYGVKVGLTNYAAAYSTG 361
CQ+AY+RIEGD IVCAAY+HELP+YGVKVGLTNYAAAY TG
Sbjct: 68 ICQIAYARIEGDMIVCAAYAHELPKYGVKVGLTNYAAAYCTG 109
Score = 133 bits (322), Expect = 5e-31
Identities = 57/78 (73%), Positives = 70/78 (89%)
Frame = +1
Query: 436 CYLDVGLARTTTGARVFGAMKGAVDGGLNVPHSIKRFPGYDAESKKFNAEVHRAHIFGLH 615
CYLD GLARTTTG +VFGA+KGAVDGGL++PHS KRFPGYD+ESK+FNAEVHR HI G +
Sbjct: 151 CYLDAGLARTTTGNKVFGALKGAVDGGLSIPHSTKRFPGYDSESKEFNAEVHRKHIMGQN 210
Query: 616 VAEYMRSLEQDDEDSFKR 669
VA+YMR L ++DED++K+
Sbjct: 211 VADYMRYLMEEDEDAYKK 228
>U14966-1|AAA85654.1| 297|Homo sapiens ribosomal protein L5
protein.
Length = 297
Score = 196 bits (479), Expect = 4e-50
Identities = 86/102 (84%), Positives = 97/102 (95%)
Frame = +2
Query: 56 MGFVKVVKNKQYFKRYQVKFKRRREGKTDYYARKRLVVQDKNKYNTPKYRLIVRLSNKDV 235
MGFVKVVKNK YFKRYQVKF+RRREGKTDYYARKRLV+QDKNKYNTPKYR+IVR++N+D+
Sbjct: 1 MGFVKVVKNKAYFKRYQVKFRRRREGKTDYYARKRLVIQDKNKYNTPKYRMIVRVTNRDI 60
Query: 236 TCQVAYSRIEGDHIVCAAYSHELPRYGVKVGLTNYAAAYSTG 361
CQ+AY+RIEGD IVCA Y+HELP+YGVKVGLTNYAAAY TG
Sbjct: 61 ICQIAYARIEGDMIVCARYAHELPKYGVKVGLTNYAAAYCTG 102
Score = 133 bits (322), Expect = 5e-31
Identities = 57/78 (73%), Positives = 70/78 (89%)
Frame = +1
Query: 436 CYLDVGLARTTTGARVFGAMKGAVDGGLNVPHSIKRFPGYDAESKKFNAEVHRAHIFGLH 615
CYLD GLARTTTG +VFGA+KGAVDGGL++PHS KRFPGYD+ESK+FNAEVHR HI G +
Sbjct: 144 CYLDAGLARTTTGNKVFGALKGAVDGGLSIPHSTKRFPGYDSESKEFNAEVHRKHIMGQN 203
Query: 616 VAEYMRSLEQDDEDSFKR 669
VA+YMR L ++DED++K+
Sbjct: 204 VADYMRYLMEEDEDAYKK 221
>BC001882-1|AAH01882.1| 101|Homo sapiens RPL5 protein protein.
Length = 101
Score = 192 bits (467), Expect = 1e-48
Identities = 84/98 (85%), Positives = 95/98 (96%)
Frame = +2
Query: 56 MGFVKVVKNKQYFKRYQVKFKRRREGKTDYYARKRLVVQDKNKYNTPKYRLIVRLSNKDV 235
MGFVKVVKNK YFKRYQVKF+RRREGKTDYYARKRLV+QDKNKYNTPKYR+IVR++N+D+
Sbjct: 1 MGFVKVVKNKAYFKRYQVKFRRRREGKTDYYARKRLVIQDKNKYNTPKYRMIVRVTNRDI 60
Query: 236 TCQVAYSRIEGDHIVCAAYSHELPRYGVKVGLTNYAAA 349
CQ+AY+RIEGD IVCAAY+HELP+YGVKVGLTNYAAA
Sbjct: 61 ICQIAYARIEGDMIVCAAYAHELPKYGVKVGLTNYAAA 98
>U76609-1|AAB18361.1| 145|Homo sapiens ribosomal L5 protein
protein.
Length = 145
Score = 115 bits (277), Expect = 1e-25
Identities = 49/69 (71%), Positives = 62/69 (89%)
Frame = +1
Query: 463 TTTGARVFGAMKGAVDGGLNVPHSIKRFPGYDAESKKFNAEVHRAHIFGLHVAEYMRSLE 642
TTTG +VFGA+KGAVDGGL++PHS KRFPGYD+ESK+FNAEVHR HI G +VA+YMR L
Sbjct: 1 TTTGNKVFGALKGAVDGGLSIPHSTKRFPGYDSESKEFNAEVHRKHIMGQNVADYMRYLM 60
Query: 643 QDDEDSFKR 669
++DED++K+
Sbjct: 61 EEDEDAYKK 69
>AL162740-2|CAI22506.1| 126|Homo sapiens ribosomal protein L5
protein.
Length = 126
Score = 95.9 bits (228), Expect = 1e-19
Identities = 40/52 (76%), Positives = 49/52 (94%)
Frame = +2
Query: 206 LIVRLSNKDVTCQVAYSRIEGDHIVCAAYSHELPRYGVKVGLTNYAAAYSTG 361
+IVR++N+D+ CQ+AY+RIEGD IVCAAY+HELP+YGVKVGLTNYAAAY TG
Sbjct: 1 MIVRVTNRDIICQIAYARIEGDMIVCAAYAHELPKYGVKVGLTNYAAAYCTG 52
Score = 63.7 bits (148), Expect = 6e-10
Identities = 26/32 (81%), Positives = 30/32 (93%)
Frame = +1
Query: 436 CYLDVGLARTTTGARVFGAMKGAVDGGLNVPH 531
CYLD GLARTTTG +VFGA+KGAVDGGL++PH
Sbjct: 94 CYLDAGLARTTTGNKVFGALKGAVDGGLSIPH 125
>X76061-1|CAA53661.1| 1139|Homo sapiens 130K protein protein.
Length = 1139
Score = 31.9 bits (69), Expect = 2.1
Identities = 22/66 (33%), Positives = 29/66 (43%), Gaps = 2/66 (3%)
Frame = -3
Query: 470 VVVRAKPTSK*HL*HLLCQCIRCQVQVFEAVF--VLIADQLNMLQHNLSDQPSHHNVATH 297
+ V AK T + + +C R Q Q V+ VLI + SD SH N T
Sbjct: 896 IYVMAKVTKEDKSFQNIMRCYRTQPQARSQVYRSVLIKGKRKRRNSGSSDSRSHQNSPTE 955
Query: 296 VNKQRT 279
+NK RT
Sbjct: 956 LNKDRT 961
>X74594-1|CAA52671.1| 1082|Homo sapiens Rb2/p130 protein protein.
Length = 1082
Score = 31.9 bits (69), Expect = 2.1
Identities = 22/66 (33%), Positives = 29/66 (43%), Gaps = 2/66 (3%)
Frame = -3
Query: 470 VVVRAKPTSK*HL*HLLCQCIRCQVQVFEAVF--VLIADQLNMLQHNLSDQPSHHNVATH 297
+ V AK T + + +C R Q Q V+ VLI + SD SH N T
Sbjct: 839 IYVMAKVTKEDKSFQNIMRCYRTQPQARSQVYRSVLIKGKRKRRNSGSSDSRSHQNSPTE 898
Query: 296 VNKQRT 279
+NK RT
Sbjct: 899 LNKDRT 904
>S67171-1|AAB29227.1| 1139|Homo sapiens p130 protein.
Length = 1139
Score = 31.9 bits (69), Expect = 2.1
Identities = 22/66 (33%), Positives = 29/66 (43%), Gaps = 2/66 (3%)
Frame = -3
Query: 470 VVVRAKPTSK*HL*HLLCQCIRCQVQVFEAVF--VLIADQLNMLQHNLSDQPSHHNVATH 297
+ V AK T + + +C R Q Q V+ VLI + SD SH N T
Sbjct: 896 IYVMAKVTKEDKSFQNIMRCYRTQPQARSQVYRSVLIKGKRKRRNSGSSDSRSHQNSPTE 955
Query: 296 VNKQRT 279
+NK RT
Sbjct: 956 LNKDRT 961
>BX537767-1|CAD97830.1| 849|Homo sapiens hypothetical protein
protein.
Length = 849
Score = 31.9 bits (69), Expect = 2.1
Identities = 22/66 (33%), Positives = 29/66 (43%), Gaps = 2/66 (3%)
Frame = -3
Query: 470 VVVRAKPTSK*HL*HLLCQCIRCQVQVFEAVF--VLIADQLNMLQHNLSDQPSHHNVATH 297
+ V AK T + + +C R Q Q V+ VLI + SD SH N T
Sbjct: 606 IYVMAKVTKEDKSFQNIMRCYRTQPQARSQVYRSVLIKGKRKRRNSGSSDSRSHQNSPTE 665
Query: 296 VNKQRT 279
+NK RT
Sbjct: 666 LNKDRT 671
>BC034490-1|AAH34490.1| 1139|Homo sapiens retinoblastoma-like 2 (p130)
protein.
Length = 1139
Score = 31.9 bits (69), Expect = 2.1
Identities = 22/66 (33%), Positives = 29/66 (43%), Gaps = 2/66 (3%)
Frame = -3
Query: 470 VVVRAKPTSK*HL*HLLCQCIRCQVQVFEAVF--VLIADQLNMLQHNLSDQPSHHNVATH 297
+ V AK T + + +C R Q Q V+ VLI + SD SH N T
Sbjct: 896 IYVMAKVTKEDKSFQNIMRCYRTQPQARSQVYRSVLIKGKRKRRNSGSSDSRSHQNSPTE 955
Query: 296 VNKQRT 279
+NK RT
Sbjct: 956 LNKDRT 961
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 99,216,810
Number of Sequences: 237096
Number of extensions: 2192871
Number of successful extensions: 4205
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 3990
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4204
length of database: 76,859,062
effective HSP length: 87
effective length of database: 56,231,710
effective search space used: 7591280850
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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