Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmmt24g22
         (732 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AK094511-1|BAC04371.1|  397|Homo sapiens protein ( Homo sapiens ...    31   3.2  

>AK094511-1|BAC04371.1|  397|Homo sapiens protein ( Homo sapiens
           cDNA FLJ37192 fis, clone BRALZ2003525, highly similar to
           LIM/HOMEOBOX PROTEIN LHX2. ).
          Length = 397

 Score = 31.5 bits (68), Expect = 3.2
 Identities = 31/113 (27%), Positives = 50/113 (44%), Gaps = 4/113 (3%)
 Frame = +2

Query: 14  ELTTEEVLSCNQQEEAYYCK--LRTPILHLRPETKFCKIKLNSNVCKLKYSNCETKIIAL 187
           +L  E  L+C  ++ + YCK    +P LH  P  +F   +     C L  S  E  ++  
Sbjct: 67  KLNLESELTCFSKDGSIYCKEDYYSPSLH-GPYRRFSVQRCAR--CHLGISASE--MVMR 121

Query: 188 THPSLYLYHC--CGTCEVKVMCGEHIALKQLNNTGRLYLEPGCLIKGSDYTLH 340
               +Y  +C  C TC   +  G+H  +K      RL+ E   L++G +Y  H
Sbjct: 122 ARDLVYHLNCFTCTTCNKMLTTGDHFGMKDSLVYCRLHFE--ALLQG-EYPAH 171


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 91,287,740
Number of Sequences: 237096
Number of extensions: 1740362
Number of successful extensions: 2996
Number of sequences better than 10.0: 1
Number of HSP's better than 10.0 without gapping: 2943
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2996
length of database: 76,859,062
effective HSP length: 88
effective length of database: 55,994,614
effective search space used: 8679165170
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)