Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmmt24g08
(658 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z97634-6|CAI95596.1| 218|Homo sapiens mitochondrial ribosomal p... 108 1e-23
Z97634-5|CAM26404.1| 194|Homo sapiens mitochondrial ribosomal p... 108 1e-23
Z97634-3|CAI95594.1| 256|Homo sapiens mitochondrial ribosomal p... 108 1e-23
Z97634-2|CAM26403.1| 240|Homo sapiens mitochondrial ribosomal p... 108 1e-23
BC000990-1|AAH00990.2| 256|Homo sapiens mitochondrial ribosomal... 108 1e-23
BC000507-1|AAH00507.2| 256|Homo sapiens mitochondrial ribosomal... 108 1e-23
Z97634-4|CAI95595.1| 256|Homo sapiens mitochondrial ribosomal p... 103 4e-22
AK096844-1|BAC04874.1| 158|Homo sapiens protein ( Homo sapiens ... 56 8e-08
U19796-1|AAC50181.1| 128|Homo sapiens melanoma antigen p15 prot... 43 0.001
CR541751-1|CAG46551.1| 128|Homo sapiens MRPL28 protein. 42 0.002
BT009857-1|AAP88859.1| 128|Homo sapiens mitochondrial ribosomal... 42 0.002
AE006463-6|AAK61226.1| 131|Homo sapiens melanoma-associated ant... 36 0.13
>Z97634-6|CAI95596.1| 218|Homo sapiens mitochondrial ribosomal
protein L28 protein.
Length = 218
Score = 108 bits (260), Expect = 1e-23
Identities = 59/165 (35%), Positives = 87/165 (52%), Gaps = 2/165 (1%)
Frame = +1
Query: 169 KKGRFEIGIASELPPAYKKFWREWKVLKPAAVHFVPQEGKWKRDELTGETYPIQNIPIPL 348
K+ + GI S LP Y + E + P VH+ P K+K + G+ ++++PIP+
Sbjct: 12 KRLQLREGICSRLPGHYLRSLEEERT--PTPVHYRPHGAKFKINPKNGQRERVEDVPIPI 69
Query: 349 KFPAEINEGIWGGEAVVKG--FQKRDDRRRRVPHYWVPVLKRTVVRSEVLNTHLSVTVTD 522
FP E G+WGGE + G + D +R+ W P L SE+L+ +VTVT
Sbjct: 70 YFPPESQRGLWGGEGWILGQIYANNDKLSKRLKKVWKPQLFEREFYSEILDKKFTVTVTM 129
Query: 523 RTISLINDHYGFDHYLLKTPACDLVSVLALKLKKQILTELMNGCP 657
RT+ LI++ YG D Y+LKTP DL S + LK+ +L L P
Sbjct: 130 RTLDLIDEAYGLDFYILKTPKEDLCSKFGMDLKRGMLLRLARQDP 174
>Z97634-5|CAM26404.1| 194|Homo sapiens mitochondrial ribosomal
protein L28 protein.
Length = 194
Score = 108 bits (260), Expect = 1e-23
Identities = 59/165 (35%), Positives = 87/165 (52%), Gaps = 2/165 (1%)
Frame = +1
Query: 169 KKGRFEIGIASELPPAYKKFWREWKVLKPAAVHFVPQEGKWKRDELTGETYPIQNIPIPL 348
K+ + GI S LP Y + E + P VH+ P K+K + G+ ++++PIP+
Sbjct: 12 KRLQLREGICSRLPGHYLRSLEEERT--PTPVHYRPHGAKFKINPKNGQRERVEDVPIPI 69
Query: 349 KFPAEINEGIWGGEAVVKG--FQKRDDRRRRVPHYWVPVLKRTVVRSEVLNTHLSVTVTD 522
FP E G+WGGE + G + D +R+ W P L SE+L+ +VTVT
Sbjct: 70 YFPPESQRGLWGGEGWILGQIYANNDKLSKRLKKVWKPQLFEREFYSEILDKKFTVTVTM 129
Query: 523 RTISLINDHYGFDHYLLKTPACDLVSVLALKLKKQILTELMNGCP 657
RT+ LI++ YG D Y+LKTP DL S + LK+ +L L P
Sbjct: 130 RTLDLIDEAYGLDFYILKTPKEDLCSKFGMDLKRGMLLRLARQDP 174
>Z97634-3|CAI95594.1| 256|Homo sapiens mitochondrial ribosomal
protein L28 protein.
Length = 256
Score = 108 bits (260), Expect = 1e-23
Identities = 59/165 (35%), Positives = 87/165 (52%), Gaps = 2/165 (1%)
Frame = +1
Query: 169 KKGRFEIGIASELPPAYKKFWREWKVLKPAAVHFVPQEGKWKRDELTGETYPIQNIPIPL 348
K+ + GI S LP Y + E + P VH+ P K+K + G+ ++++PIP+
Sbjct: 12 KRLQLREGICSRLPGHYLRSLEEERT--PTPVHYRPHGAKFKINPKNGQRERVEDVPIPI 69
Query: 349 KFPAEINEGIWGGEAVVKG--FQKRDDRRRRVPHYWVPVLKRTVVRSEVLNTHLSVTVTD 522
FP E G+WGGE + G + D +R+ W P L SE+L+ +VTVT
Sbjct: 70 YFPPESQRGLWGGEGWILGQIYANNDKLSKRLKKVWKPQLFEREFYSEILDKKFTVTVTM 129
Query: 523 RTISLINDHYGFDHYLLKTPACDLVSVLALKLKKQILTELMNGCP 657
RT+ LI++ YG D Y+LKTP DL S + LK+ +L L P
Sbjct: 130 RTLDLIDEAYGLDFYILKTPKEDLCSKFGMDLKRGMLLRLARQDP 174
>Z97634-2|CAM26403.1| 240|Homo sapiens mitochondrial ribosomal
protein L28 protein.
Length = 240
Score = 108 bits (260), Expect = 1e-23
Identities = 59/165 (35%), Positives = 87/165 (52%), Gaps = 2/165 (1%)
Frame = +1
Query: 169 KKGRFEIGIASELPPAYKKFWREWKVLKPAAVHFVPQEGKWKRDELTGETYPIQNIPIPL 348
K+ + GI S LP Y + E + P VH+ P K+K + G+ ++++PIP+
Sbjct: 12 KRLQLREGICSRLPGHYLRSLEEERT--PTPVHYRPHGAKFKINPKNGQRERVEDVPIPI 69
Query: 349 KFPAEINEGIWGGEAVVKG--FQKRDDRRRRVPHYWVPVLKRTVVRSEVLNTHLSVTVTD 522
FP E G+WGGE + G + D +R+ W P L SE+L+ +VTVT
Sbjct: 70 YFPPESQRGLWGGEGWILGQIYANNDKLSKRLKKVWKPQLFEREFYSEILDKKFTVTVTM 129
Query: 523 RTISLINDHYGFDHYLLKTPACDLVSVLALKLKKQILTELMNGCP 657
RT+ LI++ YG D Y+LKTP DL S + LK+ +L L P
Sbjct: 130 RTLDLIDEAYGLDFYILKTPKEDLCSKFGMDLKRGMLLRLARQDP 174
>BC000990-1|AAH00990.2| 256|Homo sapiens mitochondrial ribosomal
protein L28 protein.
Length = 256
Score = 108 bits (260), Expect = 1e-23
Identities = 59/165 (35%), Positives = 87/165 (52%), Gaps = 2/165 (1%)
Frame = +1
Query: 169 KKGRFEIGIASELPPAYKKFWREWKVLKPAAVHFVPQEGKWKRDELTGETYPIQNIPIPL 348
K+ + GI S LP Y + E + P VH+ P K+K + G+ ++++PIP+
Sbjct: 12 KRLQLREGICSRLPGYYLRSLEEERT--PTPVHYRPHGAKFKINPKNGQRERVEDVPIPI 69
Query: 349 KFPAEINEGIWGGEAVVKG--FQKRDDRRRRVPHYWVPVLKRTVVRSEVLNTHLSVTVTD 522
FP E G+WGGE + G + D +R+ W P L SE+L+ +VTVT
Sbjct: 70 YFPPESQRGLWGGEGWILGQIYANNDKLSKRLKKVWKPQLFEREFYSEILDKKFTVTVTM 129
Query: 523 RTISLINDHYGFDHYLLKTPACDLVSVLALKLKKQILTELMNGCP 657
RT+ LI++ YG D Y+LKTP DL S + LK+ +L L P
Sbjct: 130 RTLDLIDEAYGLDFYILKTPKEDLCSKFGMDLKRGMLLRLARQDP 174
>BC000507-1|AAH00507.2| 256|Homo sapiens mitochondrial ribosomal
protein L28 protein.
Length = 256
Score = 108 bits (260), Expect = 1e-23
Identities = 59/165 (35%), Positives = 87/165 (52%), Gaps = 2/165 (1%)
Frame = +1
Query: 169 KKGRFEIGIASELPPAYKKFWREWKVLKPAAVHFVPQEGKWKRDELTGETYPIQNIPIPL 348
K+ + GI S LP Y + E + P VH+ P K+K + G+ ++++PIP+
Sbjct: 12 KRLQLREGICSRLPGHYLRSLEEERT--PTPVHYRPHGAKFKINPKNGQRERVEDVPIPI 69
Query: 349 KFPAEINEGIWGGEAVVKG--FQKRDDRRRRVPHYWVPVLKRTVVRSEVLNTHLSVTVTD 522
FP E G+WGGE + G + D +R+ W P L SE+L+ +VTVT
Sbjct: 70 YFPPESQRGLWGGEGWILGQIYANNDKLSKRLKKVWKPQLFEREFYSEILDKKFTVTVTM 129
Query: 523 RTISLINDHYGFDHYLLKTPACDLVSVLALKLKKQILTELMNGCP 657
RT+ LI++ YG D Y+LKTP DL S + LK+ +L L P
Sbjct: 130 RTLDLIDEAYGLDFYILKTPKEDLCSKFGMDLKRGMLLRLARQDP 174
>Z97634-4|CAI95595.1| 256|Homo sapiens mitochondrial ribosomal
protein L28 protein.
Length = 256
Score = 103 bits (248), Expect = 4e-22
Identities = 57/165 (34%), Positives = 85/165 (51%), Gaps = 2/165 (1%)
Frame = +1
Query: 169 KKGRFEIGIASELPPAYKKFWREWKVLKPAAVHFVPQEGKWKRDELTGETYPIQNIPIPL 348
K+ + GI S LP Y + E + P VH+ P K+K + G+ ++++PIP+
Sbjct: 12 KRLQLREGICSRLPGHYLRSLEEERT--PTPVHYRPHGAKFKINPKNGQRERVEDVPIPI 69
Query: 349 KFPAEINEGIWGGEAVVKG--FQKRDDRRRRVPHYWVPVLKRTVVRSEVLNTHLSVTVTD 522
FP E G+WGGE + G + D +R+ W P L SE+L+ +VTVT
Sbjct: 70 YFPPESQRGLWGGEGWILGQIYANNDKLSKRLKKVWKPQLFEREFYSEILDKKFTVTVTM 129
Query: 523 RTISLINDHYGFDHYLLKTPACDLVSVLALKLKKQILTELMNGCP 657
RT+ LI++ YG D Y+LK DL S + LK+ +L L P
Sbjct: 130 RTLDLIDEAYGLDFYILKASGEDLCSKFGMDLKRGMLLRLARQDP 174
>AK096844-1|BAC04874.1| 158|Homo sapiens protein ( Homo sapiens
cDNA FLJ39525 fis, clone PUAEN2002758. ).
Length = 158
Score = 56.4 bits (130), Expect = 8e-08
Identities = 27/79 (34%), Positives = 42/79 (53%)
Frame = +1
Query: 169 KKGRFEIGIASELPPAYKKFWREWKVLKPAAVHFVPQEGKWKRDELTGETYPIQNIPIPL 348
K+ + GI S LP Y + E + P VH+ P K+K + G+ ++++PIP+
Sbjct: 12 KRLQLREGICSRLPGHYLRSLEEERT--PTPVHYRPHGAKFKINPKNGQRERVEDVPIPI 69
Query: 349 KFPAEINEGIWGGEAVVKG 405
FP E G+WGGE + G
Sbjct: 70 YFPPESQRGLWGGEGWILG 88
>U19796-1|AAC50181.1| 128|Homo sapiens melanoma antigen p15
protein.
Length = 128
Score = 42.7 bits (96), Expect = 0.001
Identities = 20/45 (44%), Positives = 28/45 (62%)
Frame = +1
Query: 523 RTISLINDHYGFDHYLLKTPACDLVSVLALKLKKQILTELMNGCP 657
RT+ LI++ YG D Y+LKTP DL S ++LK+ +L L P
Sbjct: 2 RTLDLIDEAYGLDFYILKTPKEDLCSKFGMELKRGMLLRLARQDP 46
>CR541751-1|CAG46551.1| 128|Homo sapiens MRPL28 protein.
Length = 128
Score = 41.9 bits (94), Expect = 0.002
Identities = 20/45 (44%), Positives = 27/45 (60%)
Frame = +1
Query: 523 RTISLINDHYGFDHYLLKTPACDLVSVLALKLKKQILTELMNGCP 657
RT+ LI++ YG D Y+LKTP DL S + LK+ +L L P
Sbjct: 2 RTLDLIDEAYGLDFYILKTPKEDLCSKFGMDLKRGMLLRLARQDP 46
>BT009857-1|AAP88859.1| 128|Homo sapiens mitochondrial ribosomal
protein L28 protein.
Length = 128
Score = 41.9 bits (94), Expect = 0.002
Identities = 20/45 (44%), Positives = 27/45 (60%)
Frame = +1
Query: 523 RTISLINDHYGFDHYLLKTPACDLVSVLALKLKKQILTELMNGCP 657
RT+ LI++ YG D Y+LKTP DL S + LK+ +L L P
Sbjct: 2 RTLDLIDEAYGLDFYILKTPKEDLCSKFGMDLKRGMLLRLARQDP 46
>AE006463-6|AAK61226.1| 131|Homo sapiens melanoma-associated
antigen recgonized by T lymphocytes ; P15 protein.
Length = 131
Score = 35.9 bits (79), Expect = 0.13
Identities = 20/48 (41%), Positives = 27/48 (56%), Gaps = 3/48 (6%)
Frame = +1
Query: 523 RTISLINDHYGFDHYLLK---TPACDLVSVLALKLKKQILTELMNGCP 657
RT+ LI++ YG D Y+LK TP DL S + LK+ +L L P
Sbjct: 2 RTLDLIDEAYGLDFYILKASGTPKEDLCSKFGMDLKRGMLLRLARQDP 49
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 89,431,771
Number of Sequences: 237096
Number of extensions: 1875661
Number of successful extensions: 3411
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 3318
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3402
length of database: 76,859,062
effective HSP length: 87
effective length of database: 56,231,710
effective search space used: 7366354010
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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