Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmmt24f14
         (622 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

M95678-1|AAA36453.1| 1181|Homo sapiens phospholipase C-beta-2 pr...    31   3.3  
AB209583-1|BAD92820.1|  901|Homo sapiens phospholipase C, beta 2...    31   3.3  

>M95678-1|AAA36453.1| 1181|Homo sapiens phospholipase C-beta-2
           protein.
          Length = 1181

 Score = 31.1 bits (67), Expect = 3.3
 Identities = 24/86 (27%), Positives = 36/86 (41%)
 Frame = +2

Query: 332 SRDWVVSTSTPDLLFHHFSMKSRVYSNYNKLHSTRIYNLNNHGGINSRQSARRMNCWWN* 511
           +R +V+S+ T    +   S  S  + +YNK   +RIY      G     S      +WN 
Sbjct: 564 NRSYVISSFTELKAYDLLSKASVQFVDYNKRQMSRIY----PKGTRMDSSNYMPQMFWNA 619

Query: 512 HMQLGILNLYFHILLMQTNFKIIVYN 589
             Q+  LN     L MQ N  +  +N
Sbjct: 620 GCQMVALNFQTMDLPMQQNMAVFEFN 645


>AB209583-1|BAD92820.1|  901|Homo sapiens phospholipase C, beta 2
           variant protein.
          Length = 901

 Score = 31.1 bits (67), Expect = 3.3
 Identities = 24/86 (27%), Positives = 36/86 (41%)
 Frame = +2

Query: 332 SRDWVVSTSTPDLLFHHFSMKSRVYSNYNKLHSTRIYNLNNHGGINSRQSARRMNCWWN* 511
           +R +V+S+ T    +   S  S  + +YNK   +RIY      G     S      +WN 
Sbjct: 575 NRSYVISSFTELKAYDLLSKASVQFVDYNKRQMSRIY----PKGTRMDSSNYMPQMFWNA 630

Query: 512 HMQLGILNLYFHILLMQTNFKIIVYN 589
             Q+  LN     L MQ N  +  +N
Sbjct: 631 GCQMVALNFQTMDLPMQQNMAVFEFN 656


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 79,210,360
Number of Sequences: 237096
Number of extensions: 1546311
Number of successful extensions: 2579
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 2517
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2572
length of database: 76,859,062
effective HSP length: 87
effective length of database: 56,231,710
effective search space used: 6691573490
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)