Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmmt24f07
(711 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
03_06_0198 - 32299480-32299643,32300084-32300126,32300843-323009... 195 3e-50
12_01_0662 + 5601147-5601176,5601419-5601517,5601601-5601651,560... 146 2e-35
10_06_0127 - 11027692-11027826,11027925-11027993,11029925-110300... 128 6e-30
03_02_0244 + 6750973-6751041,6751216-6751258,6751349-6751410,675... 85 4e-17
01_03_0243 + 14154122-14154190,14154373-14154415,14154491-141545... 79 3e-15
08_02_0565 + 18751383-18751676,18751739-18751825,18752593-18752895 69 3e-12
03_06_0413 + 33756151-33756475,33756837-33756945,33757004-337570... 69 5e-12
01_06_1282 + 35972234-35972244,35972451-35972522,35972714-359727... 42 5e-04
05_05_0116 - 22496535-22496576,22496974-22497058,22497468-224975... 40 0.002
07_03_1297 + 25587445-25587502,25587646-25587740,25588426-255886... 36 0.024
01_06_0412 + 29159918-29160046,29160148-29160297,29160385-291604... 35 0.055
05_06_0262 - 26746180-26746278,26746371-26746493,26746584-267467... 34 0.13
02_05_0373 + 28374298-28374380,28375126-28375303,28375975-283760... 34 0.13
02_02_0646 + 12606569-12606582,12608702-12608750,12609387-126095... 33 0.22
05_04_0141 - 18364065-18364176,18364722-18364948,18365183-183653... 33 0.30
05_06_0063 + 25289117-25290643 28 8.4
03_01_0555 + 4132630-4132923,4133514-4133771,4134125-4134249,413... 28 8.4
>03_06_0198 -
32299480-32299643,32300084-32300126,32300843-32300929,
32301063-32301098,32301187-32301295,32301408-32301499,
32302029-32302115,32303887-32304222
Length = 317
Score = 195 bits (475), Expect = 3e-50
Identities = 86/137 (62%), Positives = 110/137 (80%)
Frame = +3
Query: 135 MQFMLLFSRQGKLRLQKWYVAHPDKLKKKITRELITTVLARKPKMCSFLEWKDVKVVYKR 314
+ F+LL SRQGK+RL KWY + K + K+ REL +L R PK+C+F+EWK KVVY+R
Sbjct: 113 INFVLLISRQGKVRLTKWYSPYTQKERTKVIRELSGLILTRGPKLCNFVEWKGYKVVYRR 172
Query: 315 YASLYFCCAMEQEDNELLTLELIHRYVELLDKYFGSVCELDIIFNFEKAYFILDELVLGG 494
YASLYFC ++ EDNEL LE+IH +VE+LD+YFGSVCELD+IFNF KAY+ILDE+++ G
Sbjct: 173 YASLYFCMCIDAEDNELEVLEIIHHFVEVLDRYFGSVCELDLIFNFHKAYYILDEILIAG 232
Query: 495 ELQETSKKNVLKAIAAQ 545
ELQE+SKKNV + IAAQ
Sbjct: 233 ELQESSKKNVARLIAAQ 249
>12_01_0662 +
5601147-5601176,5601419-5601517,5601601-5601651,
5602822-5602995,5603869-5603928,5604759-5604800
Length = 151
Score = 146 bits (353), Expect = 2e-35
Identities = 67/143 (46%), Positives = 99/143 (69%)
Frame = +3
Query: 129 KMMQFMLLFSRQGKLRLQKWYVAHPDKLKKKITRELITTVLARKPKMCSFLEWKDVKVVY 308
+ ++F+LL +RQGK RL K+YV D K K+ E+ V+ R PK +F+E++ KV+Y
Sbjct: 9 QQIRFILLQNRQGKTRLAKYYVPLEDSEKHKVEYEVHRLVVNRDPKFTNFVEFRTHKVIY 68
Query: 309 KRYASLYFCCAMEQEDNELLTLELIHRYVELLDKYFGSVCELDIIFNFEKAYFILDELVL 488
+RYA L+F ++ DNEL LE IH +VE+LD +F +VCELD++FNF K Y ILDE +L
Sbjct: 69 RRYAGLFFSMCVDITDNELAYLECIHLFVEILDHFFSNVCELDLVFNFHKVYLILDEFIL 128
Query: 489 GGELQETSKKNVLKAIAAQDLLQ 557
GELQETSK+ +++ + + L+
Sbjct: 129 AGELQETSKRAIIERMGELEKLE 151
>10_06_0127 -
11027692-11027826,11027925-11027993,11029925-11030011,
11030146-11030286
Length = 143
Score = 128 bits (308), Expect = 6e-30
Identities = 56/134 (41%), Positives = 95/134 (70%)
Frame = +3
Query: 135 MQFMLLFSRQGKLRLQKWYVAHPDKLKKKITRELITTVLARKPKMCSFLEWKDVKVVYKR 314
++F+++ ++QG+ R+ ++Y ++ + E++ LAR CSF+E ++ KVVY+R
Sbjct: 3 IRFVVMVNKQGQTRVAQYYEHLSVDERRALEGEIVRKCLARTDHQCSFVEHRNYKVVYRR 62
Query: 315 YASLYFCCAMEQEDNELLTLELIHRYVELLDKYFGSVCELDIIFNFEKAYFILDELVLGG 494
YASL+F ++ ++NEL LE IH VE +D++FG+VCELDI+F+ EK +F+L+E+V+ G
Sbjct: 63 YASLFFLVGVDNDENELAILEFIHLLVETMDRHFGNVCELDIMFHLEKVHFMLEEMVMNG 122
Query: 495 ELQETSKKNVLKAI 536
+ ETSK+N+L I
Sbjct: 123 CIVETSKQNILAPI 136
>03_02_0244 +
6750973-6751041,6751216-6751258,6751349-6751410,
6751779-6751875,6752380-6752450,6752503-6752586,
6753040-6753294
Length = 226
Score = 85.4 bits (202), Expect = 4e-17
Identities = 44/115 (38%), Positives = 69/115 (60%), Gaps = 5/115 (4%)
Frame = +3
Query: 132 MMQFMLLFSRQGKLRLQKWYVAHPDKLKKKITRELITTVLARKPKMCSFLEWKDV----- 296
M+Q +++ S QGK RL K+Y P + + + R + + AR + +F++ +
Sbjct: 1 MIQAVMVMSTQGKPRLLKFYSYQPPEKHQDLVRGVFQLLSARPDSVSNFVKVDAIFGPGA 60
Query: 297 KVVYKRYASLYFCCAMEQEDNELLTLELIHRYVELLDKYFGSVCELDIIFNFEKA 461
K+VYK A+LYF + +NEL L+L+ +VE LD+ F +VCELDI+FNF KA
Sbjct: 61 KLVYKHLATLYFVFVFDSSENELAVLDLVQVFVETLDRCFKNVCELDIVFNFNKA 115
>01_03_0243 +
14154122-14154190,14154373-14154415,14154491-14154552,
14155214-14155310,14157663-14157733,14158338-14158694
Length = 232
Score = 79.4 bits (187), Expect = 3e-15
Identities = 41/115 (35%), Positives = 68/115 (59%), Gaps = 5/115 (4%)
Frame = +3
Query: 132 MMQFMLLFSRQGKLRLQKWYVAHPDKLKKKITRELITTVLARKPKMCSFLEWKDV----- 296
M+Q +++ S QGK RL K+Y H + +++ R + + AR + +F++ +
Sbjct: 1 MIQAVMVMSTQGKPRLLKFYSYHAPEKHQELVRAVFQLLSARPDSVSNFVKVDAIFGPGA 60
Query: 297 KVVYKRYASLYFCCAMEQEDNELLTLELIHRYVELLDKYFGSVCELDIIFNFEKA 461
K++YK A+LY + +NEL L+L+ +VE LD+ F +VCEL I+FNF KA
Sbjct: 61 KLIYKHLATLYLGFVFDGSENELAVLDLVQVFVETLDRCFKNVCELHIVFNFNKA 115
>08_02_0565 + 18751383-18751676,18751739-18751825,18752593-18752895
Length = 227
Score = 69.3 bits (162), Expect = 3e-12
Identities = 33/77 (42%), Positives = 49/77 (63%)
Frame = +3
Query: 246 VLARKPKMCSFLEWKDVKVVYKRYASLYFCCAMEQEDNELLTLELIHRYVELLDKYFGSV 425
VL CSF+E ++ KVVY+RYASL+F ++ ++NEL LE IH +VE +D++FG+V
Sbjct: 91 VLGSGSVQCSFVEHRNYKVVYRRYASLFFLVGVDNDENELAILEFIHLFVETMDRHFGNV 150
Query: 426 CELDIIFNFEKAYFILD 476
+ F+ YF D
Sbjct: 151 ----VFFSNPNNYFSCD 163
Score = 49.2 bits (112), Expect = 3e-06
Identities = 22/41 (53%), Positives = 32/41 (78%)
Frame = +3
Query: 414 FGSVCELDIIFNFEKAYFILDELVLGGELQETSKKNVLKAI 536
FG CELDI+F+ EK +F+L+E+V+ G + ETSK+N+L I
Sbjct: 181 FGQ-CELDIMFHLEKVHFMLEEMVMNGCIVETSKQNILAPI 220
>03_06_0413 +
33756151-33756475,33756837-33756945,33757004-33757058,
33757059-33757094,33757196-33757282,33757737-33757808
Length = 227
Score = 68.5 bits (160), Expect = 5e-12
Identities = 31/46 (67%), Positives = 38/46 (82%)
Frame = +3
Query: 423 VCELDIIFNFEKAYFILDELVLGGELQETSKKNVLKAIAAQDLLQE 560
VCELD+IFNF KAYFILDE+++ GELQE++KK VL+ I QD L E
Sbjct: 164 VCELDLIFNFHKAYFILDEVLIAGELQESNKKAVLRLITTQDNLVE 209
>01_06_1282 +
35972234-35972244,35972451-35972522,35972714-35972747,
35973247-35973360,35974833-35975036,35975290-35975449,
35976093-35976240,35976345-35976422,35976854-35976938,
35977142-35977213
Length = 325
Score = 41.9 bits (94), Expect = 5e-04
Identities = 38/142 (26%), Positives = 62/142 (43%), Gaps = 6/142 (4%)
Frame = +3
Query: 144 MLLFSRQGKLRLQKWYVAHPDKLKKKITRELITTVLARKPKMCSFLEWKDVK-----VVY 308
+L+ +GK K+Y L K E +V A+ K + E + V VVY
Sbjct: 154 ILVLDSEGKRVAVKYYSDDWPSLSSKQAFE--KSVFAKTQKTSARTEAEIVMFDSYFVVY 211
Query: 309 KRYASLYFCCAMEQEDNELLTLELIHRYVELLDKYF-GSVCELDIIFNFEKAYFILDELV 485
K L+F E+NEL+ ++ + E +D V + N + + LDE+V
Sbjct: 212 KFIQDLHFFVTGGDEENELILASVLQGFSEAIDYLLRNKVHRRAALENLDLIFLCLDEVV 271
Query: 486 LGGELQETSKKNVLKAIAAQDL 551
GG + ET K +L+ ++ L
Sbjct: 272 DGGIVLETDAKAILEKVSGHGL 293
>05_05_0116 -
22496535-22496576,22496974-22497058,22497468-22497545,
22497656-22497803,22498612-22498771,22499056-22499058
Length = 171
Score = 39.9 bits (89), Expect = 0.002
Identities = 33/140 (23%), Positives = 60/140 (42%), Gaps = 4/140 (2%)
Frame = +3
Query: 144 MLLFSRQGKLRLQKWYVAHPDKLKKKITRE---LITTVLARKPKMCSFLEWKDVKVVYKR 314
+LL +GK K+Y L K+ E + T A + + VVYK
Sbjct: 10 ILLLDSEGKRVAVKYYTDDWPTLSAKLAFEKSVFVKTQKATAGAEAEIVMFDGHIVVYKF 69
Query: 315 YASLYFCCAMEQEDNELLTLELIHRYVELLDKYF-GSVCELDIIFNFEKAYFILDELVLG 491
L+F +E+NEL+ ++ + + +D +V + + N + LDE+V G
Sbjct: 70 IQDLHFFVTGGEEENELILASVLQGFTDAVDIILRNNVDKRTALENLDLILLCLDEIVDG 129
Query: 492 GELQETSKKNVLKAIAAQDL 551
G + ET + + ++A +
Sbjct: 130 GIVLETEGSVIAEKVSAHGI 149
>07_03_1297 +
25587445-25587502,25587646-25587740,25588426-25588629,
25588843-25588959,25589084-25589212,25589591-25589717,
25590174-25590277,25590369-25590473,25590969-25591190,
25591869-25591967
Length = 419
Score = 36.3 bits (80), Expect = 0.024
Identities = 25/80 (31%), Positives = 39/80 (48%)
Frame = +3
Query: 294 VKVVYKRYASLYFCCAMEQEDNELLTLELIHRYVELLDKYFGSVCELDIIFNFEKAYFIL 473
V ++ + A L+F + L LEL+ R + Y G + E + NF Y +L
Sbjct: 56 VNYIHVKVAGLFFVVTTMVNVSPSLLLELLQRIARVTKDYLGVLNEDSLRKNFILVYELL 115
Query: 474 DELVLGGELQETSKKNVLKA 533
DE++ G Q TS + VLK+
Sbjct: 116 DEVIDFGYPQTTSTE-VLKS 134
>01_06_0412 +
29159918-29160046,29160148-29160297,29160385-29160447,
29160540-29160716,29160796-29160899,29162142-29162249,
29162336-29162432,29162540-29162637,29162718-29162859,
29162941-29163063,29163161-29163259
Length = 429
Score = 35.1 bits (77), Expect = 0.055
Identities = 21/75 (28%), Positives = 36/75 (48%)
Frame = +3
Query: 294 VKVVYKRYASLYFCCAMEQEDNELLTLELIHRYVELLDKYFGSVCELDIIFNFEKAYFIL 473
V ++ ++ +++ A Q N L +HR V++ YF + E + NF Y +L
Sbjct: 59 VTYMFIQHNNVFLLTASRQNCNAASILLFLHRVVDVFKHYFEELEEESLRDNFVVVYELL 118
Query: 474 DELVLGGELQETSKK 518
DE++ G Q T K
Sbjct: 119 DEMMDFGYPQYTEAK 133
>05_06_0262 -
26746180-26746278,26746371-26746493,26746584-26746725,
26746824-26746921,26747012-26747108,26747215-26747322,
26747900-26748003,26748170-26748268,26748373-26748435,
26748538-26748687,26748769-26748900
Length = 404
Score = 33.9 bits (74), Expect = 0.13
Identities = 20/72 (27%), Positives = 35/72 (48%)
Frame = +3
Query: 294 VKVVYKRYASLYFCCAMEQEDNELLTLELIHRYVELLDKYFGSVCELDIIFNFEKAYFIL 473
V ++ ++ +++ A Q N L +HR V++ YF + E + NF Y +L
Sbjct: 60 VSYMFIQHNNVFLLTASRQNCNAASILLFLHRVVDVFKHYFEELEEESLRDNFVVVYELL 119
Query: 474 DELVLGGELQET 509
DE++ G Q T
Sbjct: 120 DEMMDFGYPQYT 131
>02_05_0373 +
28374298-28374380,28375126-28375303,28375975-28376065,
28376162-28376256,28376379-28376468,28376789-28376837,
28376941-28377079,28377224-28377340,28377437-28377527,
28377604-28377746,28378009-28378123,28378439-28378483,
28378565-28378645
Length = 438
Score = 33.9 bits (74), Expect = 0.13
Identities = 23/83 (27%), Positives = 37/83 (44%), Gaps = 1/83 (1%)
Frame = +3
Query: 303 VYKRYASLYFCCAMEQEDNELLTLELIHRYVELLDKYFGSVCELDII-FNFEKAYFILDE 479
+Y R +++Y + N + + V L YFG + D I NF Y +LDE
Sbjct: 59 LYMRISNVYIVIVVSSNANVACAFKFVVEAVALFKSYFGGAFDEDAIRNNFVLIYELLDE 118
Query: 480 LVLGGELQETSKKNVLKAIAAQD 548
++ G Q S + +LK Q+
Sbjct: 119 IMDFGYPQNLSPE-ILKLYITQE 140
>02_02_0646 +
12606569-12606582,12608702-12608750,12609387-12609546,
12610372-12610519,12610610-12610687,12611935-12612019,
12612098-12612157
Length = 197
Score = 33.1 bits (72), Expect = 0.22
Identities = 20/81 (24%), Positives = 37/81 (45%), Gaps = 1/81 (1%)
Frame = +3
Query: 300 VVYKRYASLYFCCAMEQEDNELLTLELIHRYVELLDKYF-GSVCELDIIFNFEKAYFILD 476
VVYK L+F ++NEL+ ++ + + + G V + + N + +D
Sbjct: 85 VVYKFVQDLHFFVTAGDDENELIIANVLQGFSDSVGLLLRGDVEKRTALENLDLILLCID 144
Query: 477 ELVLGGELQETSKKNVLKAIA 539
E+V GG + ET + +A
Sbjct: 145 EIVDGGIILETDANTIAGKVA 165
>05_04_0141 -
18364065-18364176,18364722-18364948,18365183-18365390,
18365497-18365706,18366078-18366180,18366214-18366325,
18367061-18367204,18367835-18367936,18368081-18368186,
18368301-18368335
Length = 452
Score = 32.7 bits (71), Expect = 0.30
Identities = 20/62 (32%), Positives = 32/62 (51%)
Frame = +3
Query: 357 NELLTLELIHRYVELLDKYFGSVCELDIIFNFEKAYFILDELVLGGELQETSKKNVLKAI 536
N + + + R ++L Y G + E I NF Y ILDE++ G T++ N+LK +
Sbjct: 93 NMICDFQFLSRVADVLTDYLGDLNEDIIKDNFVLVYQILDEMMDNG-FPLTTEPNILKEM 151
Query: 537 AA 542
A
Sbjct: 152 IA 153
>05_06_0063 + 25289117-25290643
Length = 508
Score = 27.9 bits (59), Expect = 8.4
Identities = 18/55 (32%), Positives = 27/55 (49%)
Frame = +3
Query: 435 DIIFNFEKAYFILDELVLGGELQETSKKNVLKAIAAQDLLQEEETPQGFFEDHGL 599
+++ K YF++ ELV GGEL K LK A+ Q+ + GF G+
Sbjct: 102 EVMATKSKIYFVM-ELVRGGELFGRVAKGRLKEDTARRYFQQLVSAVGFCHARGV 155
>03_01_0555 +
4132630-4132923,4133514-4133771,4134125-4134249,
4134789-4134990,4135172-4135297,4135404-4135660,
4135968-4136075,4136142-4136310,4136378-4136543,
4136967-4136998,4137256-4137579,4137683-4137757,
4138093-4138162,4138228-4138385,4138872-4139021
Length = 837
Score = 27.9 bits (59), Expect = 8.4
Identities = 23/83 (27%), Positives = 38/83 (45%), Gaps = 1/83 (1%)
Frame = +3
Query: 321 SLYFCCAMEQEDNELLTLELIH-RYVELLDKYFGSVCELDIIFNFEKAYFILDELVLGGE 497
+L FC + DN + E I + LD + +L ++F+ K +L + G
Sbjct: 253 ALGFCGDIIGADNPCSSAESIPLENIASLDLSDRCIHKLPVVFSPRKLSSLLSLNIRGNP 312
Query: 498 LQETSKKNVLKAIAAQDLLQEEE 566
L + S ++LK I+ LQE E
Sbjct: 313 LDQMSSDDLLKLISGFTQLQELE 335
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,103,119
Number of Sequences: 37544
Number of extensions: 360908
Number of successful extensions: 1017
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 979
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1014
length of database: 14,793,348
effective HSP length: 80
effective length of database: 11,789,828
effective search space used: 1839213168
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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