Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmmt24f06
         (132 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U80842-1|AAB37946.2| 1000|Caenorhabditis elegans Guanylyl cyclas...    25   9.8  
AF016681-14|AAB66169.1| 1119|Caenorhabditis elegans Guanylyl cyc...    25   9.8  
AC006830-5|AAK68612.2|  569|Caenorhabditis elegans Hypothetical ...    25   9.8  

>U80842-1|AAB37946.2| 1000|Caenorhabditis elegans Guanylyl cyclase
           protein 15 protein.
          Length = 1000

 Score = 24.6 bits (51), Expect = 9.8
 Identities = 12/34 (35%), Positives = 17/34 (50%)
 Frame = -1

Query: 105 YFFIYLKNNVSTLNIFTIINIPGTNKTKAFNRSP 4
           +FFI   NN S++N  +I N   T +   F   P
Sbjct: 395 HFFIEDYNNASSINASSIFNTGSTARAGPFGPIP 428


>AF016681-14|AAB66169.1| 1119|Caenorhabditis elegans Guanylyl
           cyclase protein 21 protein.
          Length = 1119

 Score = 24.6 bits (51), Expect = 9.8
 Identities = 12/34 (35%), Positives = 17/34 (50%)
 Frame = -1

Query: 105 YFFIYLKNNVSTLNIFTIINIPGTNKTKAFNRSP 4
           +FFI   NN S++N  +I N   T +   F   P
Sbjct: 456 HFFIEDYNNASSINASSIFNTGSTARAGPFGPIP 489


>AC006830-5|AAK68612.2|  569|Caenorhabditis elegans Hypothetical
           protein ZK105.5 protein.
          Length = 569

 Score = 24.6 bits (51), Expect = 9.8
 Identities = 8/17 (47%), Positives = 11/17 (64%)
 Frame = +1

Query: 7   ASIESFCFIGTRNINNC 57
           A I  FCF+   N++NC
Sbjct: 87  ACIREFCFLTQMNVDNC 103


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,551,306
Number of Sequences: 27780
Number of extensions: 29347
Number of successful extensions: 71
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 71
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 71
length of database: 12,740,198
effective HSP length: 24
effective length of database: 12,073,478
effective search space used: 229396082
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)