Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmmt24f06
         (132 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

X16709-1|CAA34681.1|  162|Apis mellifera phospholipase A-2 protein.    21   1.8  
EF373554-1|ABQ28728.1|  167|Apis mellifera phospholipase A2 prot...    21   1.8  
AF438408-1|AAL30844.1|  167|Apis mellifera phospholipase A2 prot...    21   1.8  
DQ667183-1|ABG75735.1|  463|Apis mellifera GABA-gated ion channe...    20   2.4  
AF388659-4|AAK71996.1| 1308|Apis mellifera NFRKB-like protein pr...    20   2.4  
DQ435328-1|ABD92643.1|  143|Apis mellifera OBP11 protein.              20   3.1  
AY273778-1|AAP33487.1|  427|Apis mellifera ultraspiracle protein...    18   9.6  
AF263459-1|AAF73057.1|  427|Apis mellifera ultraspiracle protein...    18   9.6  

>X16709-1|CAA34681.1|  162|Apis mellifera phospholipase A-2 protein.
          Length = 162

 Score = 20.6 bits (41), Expect = 1.8
 Identities = 7/14 (50%), Positives = 10/14 (71%)
 Frame = +3

Query: 72  CLHYFLSR*RNKVY 113
           CLHY + + + KVY
Sbjct: 141 CLHYTVDKSKPKVY 154


>EF373554-1|ABQ28728.1|  167|Apis mellifera phospholipase A2
           protein.
          Length = 167

 Score = 20.6 bits (41), Expect = 1.8
 Identities = 7/14 (50%), Positives = 10/14 (71%)
 Frame = +3

Query: 72  CLHYFLSR*RNKVY 113
           CLHY + + + KVY
Sbjct: 146 CLHYTVDKSKPKVY 159


>AF438408-1|AAL30844.1|  167|Apis mellifera phospholipase A2
           protein.
          Length = 167

 Score = 20.6 bits (41), Expect = 1.8
 Identities = 7/14 (50%), Positives = 10/14 (71%)
 Frame = +3

Query: 72  CLHYFLSR*RNKVY 113
           CLHY + + + KVY
Sbjct: 146 CLHYTVDKSKPKVY 159


>DQ667183-1|ABG75735.1|  463|Apis mellifera GABA-gated ion channel
           protein.
          Length = 463

 Score = 20.2 bits (40), Expect = 2.4
 Identities = 11/32 (34%), Positives = 17/32 (53%)
 Frame = -1

Query: 129 FF*YKNILYFFIYLKNNVSTLNIFTIINIPGT 34
           FF   N+ Y+F YL  +   +N +  +N  GT
Sbjct: 434 FFLAINVFYWFAYLSRS-ERINYYN-VNSNGT 463


>AF388659-4|AAK71996.1| 1308|Apis mellifera NFRKB-like protein
           protein.
          Length = 1308

 Score = 20.2 bits (40), Expect = 2.4
 Identities = 10/29 (34%), Positives = 15/29 (51%)
 Frame = -1

Query: 117 KNILYFFIYLKNNVSTLNIFTIINIPGTN 31
           KNI    +  + +V   N+ T IN P T+
Sbjct: 817 KNINDHCVTTEQSVVVTNVTTTINTPTTS 845


>DQ435328-1|ABD92643.1|  143|Apis mellifera OBP11 protein.
          Length = 143

 Score = 19.8 bits (39), Expect = 3.1
 Identities = 8/17 (47%), Positives = 11/17 (64%)
 Frame = +1

Query: 16  ESFCFIGTRNINNCENV 66
           E+F  IG   I++C NV
Sbjct: 100 EAFKEIGVEMIDSCSNV 116


>AY273778-1|AAP33487.1|  427|Apis mellifera ultraspiracle protein
           protein.
          Length = 427

 Score = 18.2 bits (35), Expect = 9.6
 Identities = 7/20 (35%), Positives = 8/20 (40%)
 Frame = +1

Query: 1   YRASIESFCFIGTRNINNCE 60
           Y    E  C I  R  N C+
Sbjct: 144 YACREEKSCIIDKRQRNRCQ 163


>AF263459-1|AAF73057.1|  427|Apis mellifera ultraspiracle protein
           protein.
          Length = 427

 Score = 18.2 bits (35), Expect = 9.6
 Identities = 7/20 (35%), Positives = 8/20 (40%)
 Frame = +1

Query: 1   YRASIESFCFIGTRNINNCE 60
           Y    E  C I  R  N C+
Sbjct: 144 YACREEKSCIIDKRQRNRCQ 163


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 31,648
Number of Sequences: 438
Number of extensions: 398
Number of successful extensions: 8
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8
length of database: 146,343
effective HSP length: 24
effective length of database: 135,831
effective search space used:  2580789
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 35 (18.9 bits)