Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmmt24f01
         (654 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BT015210-1|AAT94439.1|  462|Drosophila melanogaster RE57622p pro...    30   2.4  
AE014298-2831|AAF48946.2|  462|Drosophila melanogaster CG8028-PA...    30   2.4  
AY089394-1|AAL90132.1|  250|Drosophila melanogaster AT21920p pro...    28   9.6  
AE013599-2228|AAF58034.2|  250|Drosophila melanogaster CG15708-P...    28   9.6  

>BT015210-1|AAT94439.1|  462|Drosophila melanogaster RE57622p
           protein.
          Length = 462

 Score = 30.3 bits (65), Expect = 2.4
 Identities = 14/39 (35%), Positives = 21/39 (53%)
 Frame = -2

Query: 212 PSRKHFLFICVEPGSTPRCPSGTPSMSPQKGSPASQPYT 96
           P+ +  L  C  PGST  C    P+  P+KGSP +  ++
Sbjct: 394 PASRRSLDFCA-PGSTFHCLWSLPTTCPRKGSPLAMAFS 431


>AE014298-2831|AAF48946.2|  462|Drosophila melanogaster CG8028-PA
           protein.
          Length = 462

 Score = 30.3 bits (65), Expect = 2.4
 Identities = 14/39 (35%), Positives = 21/39 (53%)
 Frame = -2

Query: 212 PSRKHFLFICVEPGSTPRCPSGTPSMSPQKGSPASQPYT 96
           P+ +  L  C  PGST  C    P+  P+KGSP +  ++
Sbjct: 394 PASRRSLDFCA-PGSTFHCLWSLPTTCPRKGSPLAMAFS 431


>AY089394-1|AAL90132.1|  250|Drosophila melanogaster AT21920p
           protein.
          Length = 250

 Score = 28.3 bits (60), Expect = 9.6
 Identities = 15/36 (41%), Positives = 19/36 (52%), Gaps = 1/36 (2%)
 Frame = +1

Query: 169 LPGSTQINRKCFREGESRRAPSAGPML-PVAAVTRR 273
           L  ST   RKC+R    R AP+ G +  P  A +RR
Sbjct: 132 LENSTSHRRKCYRASIERWAPAEGRIFCPCCATSRR 167


>AE013599-2228|AAF58034.2|  250|Drosophila melanogaster CG15708-PA
           protein.
          Length = 250

 Score = 28.3 bits (60), Expect = 9.6
 Identities = 15/36 (41%), Positives = 19/36 (52%), Gaps = 1/36 (2%)
 Frame = +1

Query: 169 LPGSTQINRKCFREGESRRAPSAGPML-PVAAVTRR 273
           L  ST   RKC+R    R AP+ G +  P  A +RR
Sbjct: 132 LENSTSHRRKCYRASIERWAPAEGRIFCPCCATSRR 167


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 32,541,191
Number of Sequences: 53049
Number of extensions: 720476
Number of successful extensions: 2641
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 2327
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2638
length of database: 24,988,368
effective HSP length: 82
effective length of database: 20,638,350
effective search space used: 2786177250
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)