Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmmt24e24
         (671 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z66521-13|CAA91403.1|  444|Caenorhabditis elegans Hypothetical p...    37   0.015
Z68014-1|CAA92023.1|  335|Caenorhabditis elegans Hypothetical pr...    28   5.3  
AC006714-7|AAK29718.3|  612|Caenorhabditis elegans Hypothetical ...    28   6.9  

>Z66521-13|CAA91403.1|  444|Caenorhabditis elegans Hypothetical
           protein W02B12.8a protein.
          Length = 444

 Score = 36.7 bits (81), Expect = 0.015
 Identities = 22/57 (38%), Positives = 25/57 (43%), Gaps = 1/57 (1%)
 Frame = +3

Query: 504 DRLGRPVVVFIGKWFPIG-DIDXXXXXXXXXXXXDPIVRGDYVIAYFHTLASSANHP 671
           DR+GRP+VV      P   +ID            D IV  DY I YFH    S N P
Sbjct: 89  DRVGRPIVVVYAYRLPSSKEIDHARLLQYLVQIIDKIVDQDYTIVYFHYGLRSHNKP 145


>Z68014-1|CAA92023.1|  335|Caenorhabditis elegans Hypothetical
           protein W04G3.1 protein.
          Length = 335

 Score = 28.3 bits (60), Expect = 5.3
 Identities = 10/27 (37%), Positives = 17/27 (62%)
 Frame = +3

Query: 468 VSGIGCLYQSGVDRLGRPVVVFIGKWF 548
           + GIG + +S +D +  P  + +GKWF
Sbjct: 80  LGGIGKMLESKIDTINVPAEMVMGKWF 106


>AC006714-7|AAK29718.3|  612|Caenorhabditis elegans Hypothetical
           protein Y119D3B.11 protein.
          Length = 612

 Score = 27.9 bits (59), Expect = 6.9
 Identities = 10/25 (40%), Positives = 18/25 (72%)
 Frame = -1

Query: 671 RMVRRRGQRVEVRDHVVTAHDRIQE 597
           +++ +  + +EVRDH+VT +D I E
Sbjct: 123 KLLEKSTENLEVRDHLVTENDAIHE 147


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,149,833
Number of Sequences: 27780
Number of extensions: 248295
Number of successful extensions: 473
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 465
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 472
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1518563232
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)