Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmmt24e08
(713 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
05_07_0239 - 28599452-28599564,28599685-28599799,28600051-286001... 38 0.006
01_01_0216 + 1843413-1843509,1844583-1844694,1844841-1844908,184... 38 0.006
05_07_0152 + 28044733-28045032,28045131-28045220,28045770-280458... 37 0.014
05_07_0151 + 28038178-28038480,28038578-28038667,28039130-280391... 37 0.018
03_03_0039 - 13986844-13986907,13987219-13987273,13987492-139876... 37 0.018
09_04_0005 + 13612060-13612291,13612381-13612510,13612726-136129... 36 0.024
10_01_0055 - 785172-785997,786859-787394,787478-787695,787789-78... 34 0.097
10_01_0052 - 750902-751697,753077-753603,753696-753913,754012-75... 34 0.13
04_04_0593 - 26480036-26481438,26481915-26482083 33 0.23
10_06_0142 - 11175732-11176545,11176924-11177450,11177544-111777... 33 0.30
04_04_0481 - 25541355-25541849,25541933-25542535,25542730-255428... 33 0.30
11_06_0262 + 21771577-21772059,21772167-21773252 32 0.52
04_04_1022 + 30195703-30195753,30195925-30195987,30197535-301978... 31 0.69
07_01_0365 + 2718707-2718839,2719335-2719405,2719512-2719955,272... 31 1.2
10_08_1057 + 22594419-22594466,22594710-22594776,22595053-225952... 30 1.6
10_08_0784 + 20529526-20529604,20529996-20530562,20530687-205316... 30 1.6
01_06_1703 + 39301075-39301829,39302735-39303560 30 1.6
10_01_0053 - 767131-767962,768517-769037,769384-769601,769720-76... 30 2.1
07_01_0635 + 4753919-4754090,4754200-4754258,4754377-4754432,475... 30 2.1
10_01_0061 + 815761-816117,817298-818002 29 2.8
04_04_1460 + 33764106-33764303,33764675-33766201 29 2.8
10_08_0925 + 21604871-21605021,21605562-21605881,21606899-216078... 29 3.7
10_08_1053 - 22575281-22575409,22575516-22575653,22575786-225758... 29 4.8
05_03_0570 - 15587147-15587209,15588249-15588446 29 4.8
04_04_0345 - 24542869-24543540,24543725-24543805,24543845-245439... 29 4.8
03_02_0179 - 6201393-6202365,6202470-6202610,6202728-6202767,620... 29 4.8
02_01_0455 + 3266123-3266258,3266348-3266670,3267083-3267661,326... 29 4.8
12_02_0674 - 21745321-21746223,21746229-21747608 28 8.5
01_05_0390 - 21720118-21720573,21720667-21721296,21721427-217217... 28 8.5
>05_07_0239 -
28599452-28599564,28599685-28599799,28600051-28600116,
28600270-28600329,28600571-28600617,28601118-28601202,
28601554-28601646,28601727-28601791,28601942-28602017,
28602110-28602175,28603082-28603141,28603400-28603489,
28603594-28603893
Length = 411
Score = 38.3 bits (85), Expect = 0.006
Identities = 24/73 (32%), Positives = 40/73 (54%)
Frame = +2
Query: 467 GWPSPTLLYLESEESSIPTTAYQGSWIVSIMILCSALTPIPSAYLADKFGRKTTLLLGAI 646
G+ SPT ++ S + T + S S+ + + + I S +A+ GRK +L++ AI
Sbjct: 81 GFSSPTQ---DAIISDLGLTLSEFSLFGSLSNVGAMVGAIASGQIAEYIGRKGSLMIAAI 137
Query: 647 PFIIGWILVIVAK 685
P IIGW+ + AK
Sbjct: 138 PNIIGWLAISFAK 150
>01_01_0216 +
1843413-1843509,1844583-1844694,1844841-1844908,
1845165-1845297,1845404-1845503,1845562-1845722,
1846095-1846188,1846273-1846426,1846597-1846743,
1846819-1846892,1846985-1847073,1847161-1847275,
1847569-1847751
Length = 508
Score = 38.3 bits (85), Expect = 0.006
Identities = 23/66 (34%), Positives = 29/66 (43%)
Frame = +2
Query: 485 LLYLESEESSIPTTAYQGSWIVSIMILCSALTPIPSAYLADKFGRKTTLLLGAIPFIIGW 664
L YL + QG W+VS + + LADKFGR T +L AIP +G
Sbjct: 76 LEYLAKDLGISENAVLQG-WVVSTTLAGATAGSFTGGALADKFGRTRTFILDAIPLAVGA 134
Query: 665 ILVIVA 682
L A
Sbjct: 135 FLSATA 140
>05_07_0152 +
28044733-28045032,28045131-28045220,28045770-28045829,
28045912-28045977,28046161-28046226,28046330-28046405,
28046721-28046785,28046879-28046971,28047302-28047322,
28047600-28047692,28047939-28047998,28048157-28048222,
28048314-28048373,28048498-28048612,28048738-28048850
Length = 447
Score = 37.1 bits (82), Expect = 0.014
Identities = 16/34 (47%), Positives = 23/34 (67%)
Frame = +2
Query: 584 IPSAYLADKFGRKTTLLLGAIPFIIGWILVIVAK 685
I S +A+ GRK +L++ AIP IIGW+ + AK
Sbjct: 117 IASGQMAEYIGRKGSLMIAAIPNIIGWLAISFAK 150
>05_07_0151 +
28038178-28038480,28038578-28038667,28039130-28039189,
28039274-28039339,28039562-28039627,28039719-28039794,
28039972-28040036,28040115-28040192,28040362-28040442,
28040526-28040610,28040702-28040748,28040969-28041028,
28041179-28041244,28041327-28041386,28041524-28041638,
28041733-28041845
Length = 476
Score = 36.7 bits (81), Expect = 0.018
Identities = 15/34 (44%), Positives = 23/34 (67%)
Frame = +2
Query: 584 IPSAYLADKFGRKTTLLLGAIPFIIGWILVIVAK 685
I S +A+ GRK +L++ A+P IIGW+ + AK
Sbjct: 118 IASGQMAEYIGRKGSLIIAAVPNIIGWLAISFAK 151
>03_03_0039 - 13986844-13986907,13987219-13987273,13987492-13987606,
13987652-13987774,13987962-13988015,13988352-13988411,
13988522-13988584,13988790-13988863,13989177-13989261,
13989376-13989456,13989764-13989856,13990275-13990339,
13990407-13990482,13990570-13990635,13991094-13991153,
13991233-13991322,13991755-13991817,13992502-13992625,
13993031-13993271,13993355-13993624,13993715-13994089,
13994178-13994381,13994455-13995136,13995231-13995279,
13995362-13995488,13995564-13996258,13996718-13996965
Length = 1433
Score = 36.7 bits (81), Expect = 0.018
Identities = 17/44 (38%), Positives = 26/44 (59%)
Frame = +2
Query: 551 SIMILCSALTPIPSAYLADKFGRKTTLLLGAIPFIIGWILVIVA 682
S++ + + + + S LAD GRKTT+ L AI I+GW + A
Sbjct: 1032 SVLTIGAMIGALTSGRLADSLGRKTTMGLAAIIGIVGWFTIYFA 1075
>09_04_0005 +
13612060-13612291,13612381-13612510,13612726-13612926,
13613086-13613185,13613513-13613559,13613871-13613964,
13614042-13614192,13614777-13614923,13614994-13615067,
13615288-13615376,13615840-13615954,13616104-13616301
Length = 525
Score = 36.3 bits (80), Expect = 0.024
Identities = 20/49 (40%), Positives = 29/49 (59%)
Frame = +2
Query: 545 IVSIMILCSALTPIPSAYLADKFGRKTTLLLGAIPFIIGWILVIVAKSL 691
+VSI I+ + + S+ L D FG K TL + +IP I+G +L A SL
Sbjct: 146 VVSIFIVGAFFGSLGSSALVDNFGCKRTLQIDSIPLILGALLSAQADSL 194
>10_01_0055 -
785172-785997,786859-787394,787478-787695,787789-787891,
788723-788770
Length = 576
Score = 34.3 bits (75), Expect = 0.097
Identities = 19/50 (38%), Positives = 30/50 (60%), Gaps = 1/50 (2%)
Frame = +2
Query: 548 VSIMILCSALTPIPSAYLADKF-GRKTTLLLGAIPFIIGWILVIVAKSLP 694
VS + LTP+ A+LAD + GR T+++ +I G ++V V+ SLP
Sbjct: 86 VSAWVGACFLTPVVGAFLADTYWGRYWTIVVFLPVYITGMLIVTVSASLP 135
>10_01_0052 -
750902-751697,753077-753603,753696-753913,754012-754114,
754337-754393
Length = 566
Score = 33.9 bits (74), Expect = 0.13
Identities = 20/48 (41%), Positives = 28/48 (58%), Gaps = 1/48 (2%)
Frame = +2
Query: 548 VSIMILCSALTPIPSAYLADKF-GRKTTLLLGAIPFIIGWILVIVAKS 688
VSI I S TP+ A+LAD + GR T ++ IIG ++V V+ S
Sbjct: 89 VSIWIGTSFFTPLIGAFLADTYWGRYWTTVISLFIIIIGMLIVTVSSS 136
>04_04_0593 - 26480036-26481438,26481915-26482083
Length = 523
Score = 33.1 bits (72), Expect = 0.23
Identities = 21/74 (28%), Positives = 36/74 (48%)
Frame = +2
Query: 467 GWPSPTLLYLESEESSIPTTAYQGSWIVSIMILCSALTPIPSAYLADKFGRKTTLLLGAI 646
G S ++Y++ + + T +Q +V + + S L + +D GRK T+ LGAI
Sbjct: 59 GVMSGAIIYIQKD---LHITEFQEEILVGCLSVVSLLGSLSGGRTSDAIGRKWTMALGAI 115
Query: 647 PFIIGWILVIVAKS 688
F G ++ A S
Sbjct: 116 VFQAGAAIMTFAPS 129
>10_06_0142 -
11175732-11176545,11176924-11177450,11177544-11177761,
11177916-11177961,11178203-11178253
Length = 551
Score = 32.7 bits (71), Expect = 0.30
Identities = 25/76 (32%), Positives = 37/76 (48%), Gaps = 1/76 (1%)
Frame = +2
Query: 464 YGWPSPTLLYLESEESSIPTTAYQGSWIVSIMILCSALTPIPSAYLADKF-GRKTTLLLG 640
YG + YL S A Q VSI I TP+ A+LAD + GR T+++
Sbjct: 43 YGVSKNLVTYLTSVLHESNVNAAQS---VSIWIGSCFFTPLIGAFLADTYWGRYWTVVMS 99
Query: 641 AIPFIIGWILVIVAKS 688
+ I+G I++ V+ S
Sbjct: 100 ILVIILGMIVLTVSAS 115
>04_04_0481 -
25541355-25541849,25541933-25542535,25542730-25542837,
25542925-25543260,25543391-25543461,25543692-25543824
Length = 581
Score = 32.7 bits (71), Expect = 0.30
Identities = 17/69 (24%), Positives = 37/69 (53%)
Frame = +2
Query: 476 SPTLLYLESEESSIPTTAYQGSWIVSIMILCSALTPIPSAYLADKFGRKTTLLLGAIPFI 655
S LLY+ + +++ + IVS+ + + + ++ DKFGRK ++L+ F+
Sbjct: 48 SGALLYIRDDFTAVEKSTVLRETIVSMAVAGAIVGAGFGGWMNDKFGRKPSILIADSLFL 107
Query: 656 IGWILVIVA 682
G +++ +A
Sbjct: 108 AGALIMALA 116
>11_06_0262 + 21771577-21772059,21772167-21773252
Length = 522
Score = 31.9 bits (69), Expect = 0.52
Identities = 12/40 (30%), Positives = 24/40 (60%)
Frame = +2
Query: 554 IMILCSALTPIPSAYLADKFGRKTTLLLGAIPFIIGWILV 673
I+++ S+ + + S +L D+FGR+ LL G ++ L+
Sbjct: 339 ILVVVSSASTLASMFLVDRFGRRALLLAGGAQMLVSEALI 378
>04_04_1022 +
30195703-30195753,30195925-30195987,30197535-30197843,
30197934-30199292
Length = 593
Score = 31.5 bits (68), Expect = 0.69
Identities = 16/43 (37%), Positives = 26/43 (60%), Gaps = 1/43 (2%)
Frame = +2
Query: 569 SALTPIPSAYLADKF-GRKTTLLLGAIPFIIGWILVIVAKSLP 694
S LTP+ A +AD F G T+L+ + +++G +LV + LP
Sbjct: 111 SYLTPVFGAIIADTFWGNYNTILVSLVFYLLGMMLVTFSAFLP 153
>07_01_0365 +
2718707-2718839,2719335-2719405,2719512-2719955,
2720660-2721802
Length = 596
Score = 30.7 bits (66), Expect = 1.2
Identities = 15/62 (24%), Positives = 30/62 (48%)
Frame = +2
Query: 476 SPTLLYLESEESSIPTTAYQGSWIVSIMILCSALTPIPSAYLADKFGRKTTLLLGAIPFI 655
S LLY+ + S+ + IVS+ + + + + D++GR+T++L+ F
Sbjct: 48 SGALLYIRDDFPSVDKNTWLQEMIVSMAVAGAIIGAAIGGWANDRYGRRTSILVADALFF 107
Query: 656 IG 661
G
Sbjct: 108 AG 109
>10_08_1057 +
22594419-22594466,22594710-22594776,22595053-22595270,
22595425-22595981,22596398-22597217
Length = 569
Score = 30.3 bits (65), Expect = 1.6
Identities = 12/41 (29%), Positives = 26/41 (63%), Gaps = 1/41 (2%)
Frame = +2
Query: 575 LTPIPSAYLADKF-GRKTTLLLGAIPFIIGWILVIVAKSLP 694
LTP+ A+LAD + G+ T+ + + ++IG +++ + +P
Sbjct: 83 LTPVLGAFLADTYWGKYKTIAISTVFYLIGLLVITASAVIP 123
>10_08_0784 +
20529526-20529604,20529996-20530562,20530687-20531639,
20532292-20532479,20532578-20533013
Length = 740
Score = 30.3 bits (65), Expect = 1.6
Identities = 18/79 (22%), Positives = 40/79 (50%), Gaps = 4/79 (5%)
Frame = +2
Query: 467 GWPSPTL----LYLESEESSIPTTAYQGSWIVSIMILCSALTPIPSAYLADKFGRKTTLL 634
GW + T+ LY++ E + +G + +I + +T A +AD FGR+ L+
Sbjct: 19 GWDNATIAGAVLYIKKEFNLQSEPLIEGLIVAMSLIGATIITTFSGA-VADSFGRRPMLI 77
Query: 635 LGAIPFIIGWILVIVAKSL 691
A+ + + ++++ A ++
Sbjct: 78 ASAVLYFVSGLVMLWAPNV 96
>01_06_1703 + 39301075-39301829,39302735-39303560
Length = 526
Score = 30.3 bits (65), Expect = 1.6
Identities = 16/48 (33%), Positives = 28/48 (58%), Gaps = 1/48 (2%)
Frame = +2
Query: 572 ALTPIPSAYLADKF-GRKTTLLLGAIPFIIGWILVIVAKSLPCCTSRG 712
++TP+ +AYLAD F GR T+LL ++G+ ++ + + P G
Sbjct: 47 SITPLVAAYLADAFLGRYWTILLFMAISVLGYGVLAASAAAPALLHGG 94
>10_01_0053 -
767131-767962,768517-769037,769384-769601,769720-769825,
769958-770017
Length = 578
Score = 29.9 bits (64), Expect = 2.1
Identities = 15/41 (36%), Positives = 26/41 (63%), Gaps = 1/41 (2%)
Frame = +2
Query: 575 LTPIPSAYLADKFGRKTTLLLGAIP-FIIGWILVIVAKSLP 694
LTP+ A+LAD + K +L +P +I+G + ++ + SLP
Sbjct: 100 LTPLFGAFLADTYWGKYRTVLTFLPIYILGLLTLMASTSLP 140
>07_01_0635 +
4753919-4754090,4754200-4754258,4754377-4754432,
4754698-4754842,4755506-4755580,4755844-4755933,
4756218-4756295,4757879-4758376,4758512-4758997
Length = 552
Score = 29.9 bits (64), Expect = 2.1
Identities = 14/36 (38%), Positives = 18/36 (50%)
Frame = +1
Query: 571 GSNTDSIRLSRRQIRKKNYTASRSYTLHNRLDTCYR 678
G + D++ SRR +R S TL N L CYR
Sbjct: 65 GGDADAVSTSRRALRSAKIPESEFTTLPNGLKFCYR 100
>10_01_0061 + 815761-816117,817298-818002
Length = 353
Score = 29.5 bits (63), Expect = 2.8
Identities = 13/22 (59%), Positives = 18/22 (81%), Gaps = 1/22 (4%)
Frame = +2
Query: 575 LTPIPSAYLADKF-GRKTTLLL 637
LTP+ A++AD F GR+TT+LL
Sbjct: 91 LTPLVGAFIADSFLGRRTTILL 112
>04_04_1460 + 33764106-33764303,33764675-33766201
Length = 574
Score = 29.5 bits (63), Expect = 2.8
Identities = 12/41 (29%), Positives = 26/41 (63%), Gaps = 1/41 (2%)
Frame = +2
Query: 572 ALTPIPSAYLADKF-GRKTTLLLGAIPFIIGWILVIVAKSL 691
+ +P+ A++AD F GR TLL GA+ + +++ ++ ++
Sbjct: 37 SFSPVVGAFVADAFCGRFWTLLFGAVAAFVAMVVITLSATI 77
>10_08_0925 +
21604871-21605021,21605562-21605881,21606899-21607897,
21608085-21608126,21608190-21608249,21608915-21608959
Length = 538
Score = 29.1 bits (62), Expect = 3.7
Identities = 12/37 (32%), Positives = 20/37 (54%)
Frame = +2
Query: 563 LCSALTPIPSAYLADKFGRKTTLLLGAIPFIIGWILV 673
LC+ I + + D+FGR+ L+G I I+ + V
Sbjct: 335 LCATFANIMAMIVVDRFGRRKLFLVGGIQMILSQLAV 371
>10_08_1053 -
22575281-22575409,22575516-22575653,22575786-22575884,
22576281-22576361,22577171-22577233,22577473-22577520,
22577622-22577990,22578082-22578183,22578290-22578414,
22578500-22578566,22578817-22578895,22578928-22579079,
22579182-22579223
Length = 497
Score = 28.7 bits (61), Expect = 4.8
Identities = 11/32 (34%), Positives = 20/32 (62%)
Frame = +2
Query: 599 LADKFGRKTTLLLGAIPFIIGWILVIVAKSLP 694
+AD GR+ L+L ++ ++IG +L A + P
Sbjct: 109 IADFLGRRRELILSSVSYLIGALLTAAAPNFP 140
>05_03_0570 - 15587147-15587209,15588249-15588446
Length = 86
Score = 28.7 bits (61), Expect = 4.8
Identities = 19/67 (28%), Positives = 35/67 (52%), Gaps = 3/67 (4%)
Frame = +2
Query: 464 YGWPSPTLLYLESE--ESSIPTTAYQGSWIVSIMILCSALTPIPSAYLADKF-GRKTTLL 634
YG + ++YL +E E ++ + +W S+ +TPI AY+AD F GR T
Sbjct: 4 YGVAANLVVYLTTELREETVSSVRNVNNWTGSVW-----MTPIAGAYIADAFLGRFWTFT 58
Query: 635 LGAIPFI 655
+ ++ ++
Sbjct: 59 VSSLIYL 65
>04_04_0345 -
24542869-24543540,24543725-24543805,24543845-24543910,
24543991-24544098,24545101-24545436,24545516-24545586,
24546105-24546252
Length = 493
Score = 28.7 bits (61), Expect = 4.8
Identities = 14/69 (20%), Positives = 35/69 (50%)
Frame = +2
Query: 476 SPTLLYLESEESSIPTTAYQGSWIVSIMILCSALTPIPSAYLADKFGRKTTLLLGAIPFI 655
S LLY+ + ++ + IVS+ ++ + + ++ D +GR+ + L+ + F
Sbjct: 53 SGALLYIRDDFPAVRDNYFLQETIVSMALVGAIIGAAGGGWINDTYGRRKSTLVADMLFA 112
Query: 656 IGWILVIVA 682
+G +++ A
Sbjct: 113 LGSLVMCAA 121
>03_02_0179 -
6201393-6202365,6202470-6202610,6202728-6202767,
6204390-6204791,6205567-6205696
Length = 561
Score = 28.7 bits (61), Expect = 4.8
Identities = 20/74 (27%), Positives = 37/74 (50%), Gaps = 3/74 (4%)
Frame = +2
Query: 479 PTLLYLESEESSIPTTAY--QGSWIVSIMILCSALTP-IPSAYLADKFGRKTTLLLGAIP 649
PT+L + E+ Y QG + + + + LT ++Y + GR+ T+L+ +
Sbjct: 58 PTVLKKKHEDKESNYCKYDNQGLQLFTSSLYLAGLTATFFASYTTRRLGRRLTMLIAGVF 117
Query: 650 FIIGWILVIVAKSL 691
FI+G I A++L
Sbjct: 118 FIVGVIFNGAAQNL 131
>02_01_0455 +
3266123-3266258,3266348-3266670,3267083-3267661,
3267866-3268336
Length = 502
Score = 28.7 bits (61), Expect = 4.8
Identities = 14/40 (35%), Positives = 25/40 (62%)
Frame = +2
Query: 551 SIMILCSALTPIPSAYLADKFGRKTTLLLGAIPFIIGWIL 670
S + L + + I ++ ++ FGRK TL + A+ ++IG IL
Sbjct: 88 SSLFLSAMVAGIFASPMSRAFGRKWTLFVAAVAYLIGAIL 127
>12_02_0674 - 21745321-21746223,21746229-21747608
Length = 760
Score = 27.9 bits (59), Expect = 8.5
Identities = 17/61 (27%), Positives = 29/61 (47%), Gaps = 3/61 (4%)
Frame = +1
Query: 514 NTNNCLPRIMDSLNNDT---LLGSNTDSIRLSRRQIRKKNYTASRSYTLHNRLDTCYRSE 684
N+N + RI DS+ T ++ +N + R + + T + L+NRLD C E
Sbjct: 226 NSNRFVGRIPDSIGGSTATVVVLANNHFVGCIPRSVGRMKGTLNELLLLNNRLDGCIPPE 285
Query: 685 V 687
+
Sbjct: 286 I 286
>01_05_0390 -
21720118-21720573,21720667-21721296,21721427-21721749,
21721844-21721973
Length = 512
Score = 27.9 bits (59), Expect = 8.5
Identities = 13/40 (32%), Positives = 23/40 (57%)
Frame = +2
Query: 551 SIMILCSALTPIPSAYLADKFGRKTTLLLGAIPFIIGWIL 670
S + L + + + ++ + K GRK T+L G F+IG +L
Sbjct: 86 SSLYLAALIASLFASVITRKLGRKMTMLGGGFIFLIGAVL 125
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,517,960
Number of Sequences: 37544
Number of extensions: 281169
Number of successful extensions: 728
Number of sequences better than 10.0: 29
Number of HSP's better than 10.0 without gapping: 711
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 727
length of database: 14,793,348
effective HSP length: 80
effective length of database: 11,789,828
effective search space used: 1851002996
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -