Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmmt24d13
(698 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
03_01_0305 - 2383187-2383298,2383606-2383684,2383762-2383867,238... 215 4e-56
10_08_0289 + 16534063-16534100,16534219-16534243,16534847-165349... 213 9e-56
05_06_0240 - 26629218-26629323,26629412-26629490,26629656-266297... 182 2e-46
12_01_1011 + 10292709-10292765,10293003-10293156,10294062-102941... 164 5e-41
06_01_0097 - 810283-810296,810398-810521,810974-811066,811144-81... 163 2e-40
02_01_0024 + 159595-159801,159892-160017,160201-160338,160431-16... 162 2e-40
03_06_0760 - 36067752-36068045,36068260-36068711,36069263-360695... 161 4e-40
09_06_0292 + 22075647-22075691,22077394-22077507,22077602-220778... 115 4e-26
03_05_0339 + 23287620-23287676,23287784-23287849,23287937-232880... 66 3e-11
06_03_1193 - 28298656-28298754,28299303-28299377,28299456-282995... 64 8e-11
02_02_0739 - 13560241-13560622,13561192-13561239,13563727-13564949 62 3e-10
10_08_0620 - 19321612-19323237 60 2e-09
06_03_0477 - 21250811-21250981,21251261-21251374,21251447-212516... 59 4e-09
02_02_0253 - 8325437-8325628,8325705-8325779,8325933-8326037,832... 58 9e-09
05_07_0067 + 27463703-27463705,27464309-27464365,27464779-274648... 57 2e-08
05_01_0337 - 2658647-2658722,2658797-2658915,2658995-2659102,265... 52 6e-07
06_03_0353 + 19810945-19810975,19811308-19811369,19811741-198118... 51 1e-06
04_04_0729 + 27612106-27612195,27612284-27612370,27612469-276125... 42 4e-04
02_01_0255 - 1674417-1674488,1674670-1675322,1676132-1676195,167... 30 1.5
03_05_0205 - 21965782-21965979,21969169-21969417 29 2.7
03_06_0302 - 32981404-32981538,32981619-32981678,32981800-329818... 29 4.7
11_04_0340 - 16536571-16536705,16536820-16536951,16537265-165381... 28 6.2
10_01_0030 - 386008-388056,388166-388360,388931-389062,389167-38... 28 6.2
03_05_0820 + 27951971-27954236,27954746-27955008,27955169-279552... 28 6.2
12_02_0555 - 20410659-20410898 28 8.2
>03_01_0305 -
2383187-2383298,2383606-2383684,2383762-2383867,
2383941-2384044,2384141-2384240,2384533-2384628,
2384724-2384801,2385355-2385423,2385511-2385591,
2385670-2385759,2385859-2385945,2386022-2386126,
2386591-2386686,2386796-2386971,2387225-2387384,
2387898-2388029,2388236-2388260,2389023-2389174
Length = 615
Score = 215 bits (524), Expect = 4e-56
Identities = 103/184 (55%), Positives = 141/184 (76%)
Frame = +1
Query: 145 RVVRQTVSLHKSYQLSRFYAKDVRFGADVRALMLQGVDILADAVAVTMGPKGRNVILEQS 324
R + ++LH++Y AKD++FG + RALML+GV+ LADAV VTMGPKGR V++EQS
Sbjct: 58 RQIGSRLALHRNYA-----AKDIKFGVEARALMLRGVEELADAVKVTMGPKGRTVVIEQS 112
Query: 325 WGSPKITKDGVTVAKGVELKDKFQNIGAKLVQNVANNTNEEAGDGTTTATVLARAIAKEG 504
+G+PK+TKDGVTVAK +E ++ +N+GA LV+ VAN TN+ AGDGTT ATVL +AI EG
Sbjct: 113 FGAPKVTKDGVTVAKSIEFSNRVKNVGASLVKQVANATNDTAGDGTTCATVLTKAIFAEG 172
Query: 505 FEKISKGANPIEIRRGVMLAVDAVKEKLKGMSKPVTTPEEIAQVATISANGDTAIGKLIA 684
+ ++ G N +++RRG+ +AVD V LKGM++ ++T EEIAQV TISANG+ IG+LIA
Sbjct: 173 CKSVAAGMNAMDLRRGISMAVDEVVTNLKGMARMISTSEEIAQVGTISANGEREIGELIA 232
Query: 685 DAMK 696
AM+
Sbjct: 233 KAME 236
>10_08_0289 +
16534063-16534100,16534219-16534243,16534847-16534978,
16535255-16535441,16536014-16536189,16536282-16536377,
16536511-16536615,16536654-16536683,16536698-16536784,
16536874-16536963,16537033-16537113,16537200-16537268,
16537413-16537490,16537578-16537673,16537981-16538080,
16538208-16538311,16538396-16538501,16538595-16538673,
16538861-16538963
Length = 593
Score = 213 bits (521), Expect = 9e-56
Identities = 108/180 (60%), Positives = 139/180 (77%), Gaps = 10/180 (5%)
Frame = +1
Query: 187 LSRFYA-KDVRFGADVRALMLQGVDILADAVAVTMGPK---------GRNVILEQSWGSP 336
LSR YA KD++FG + RALML+GV+ LADAV VTMGPK GRNV++EQS+GSP
Sbjct: 28 LSRNYAAKDIKFGVEARALMLRGVEELADAVKVTMGPKIGLNVSIMQGRNVVIEQSYGSP 87
Query: 337 KITKDGVTVAKGVELKDKFQNIGAKLVQNVANNTNEEAGDGTTTATVLARAIAKEGFEKI 516
K+TKDGVTVAK +E KD+ +N+GA LV+ VAN TN+ AGDGTT ATVL +AI EG + +
Sbjct: 88 KVTKDGVTVAKSIEFKDRVKNVGASLVKQVANATNDTAGDGTTCATVLTKAIFTEGCKSV 147
Query: 517 SKGANPIEIRRGVMLAVDAVKEKLKGMSKPVTTPEEIAQVATISANGDTAIGKLIADAMK 696
+ G N +++RRG+ +AVDAV LKGM++ ++T EEIAQV TISANG+ IG+LIA AM+
Sbjct: 148 AAGMNAMDLRRGISMAVDAVVTNLKGMARMISTSEEIAQVGTISANGEREIGELIAKAME 207
>05_06_0240 -
26629218-26629323,26629412-26629490,26629656-26629761,
26629844-26629947,26630069-26630168,26630256-26630351,
26630464-26630541,26630603-26630671,26630766-26630846,
26630879-26630935,26631016-26631105,26631192-26631278,
26631690-26631794,26631899-26631994,26632222-26632397,
26632847-26633006,26633151-26633600
Length = 679
Score = 182 bits (444), Expect = 2e-46
Identities = 90/167 (53%), Positives = 121/167 (72%)
Frame = +1
Query: 196 FYAKDVRFGADVRALMLQGVDILADAVAVTMGPKGRNVILEQSWGSPKITKDGVTVAKGV 375
+ AK+V FG RA +LQGV+ LADAV VTMGPKGRNVI+E+S +PK+TKDGVTVAK +
Sbjct: 117 YAAKEVAFGVGARAALLQGVNDLADAVKVTMGPKGRNVIIERSHRAPKVTKDGVTVAKSI 176
Query: 376 ELKDKFQNIGAKLVQNVANNTNEEAGDGTTTATVLARAIAKEGFEKISKGANPIEIRRGV 555
E +D +N+GA LV+ VA TN+ AGDGTT ATVL +AI EG + ++ G N +++R G+
Sbjct: 177 EFEDSAKNVGANLVKQVAEATNKVAGDGTTCATVLTQAILTEGCKAVAAGVNVMDLRNGI 236
Query: 556 MLAVDAVKEKLKGMSKPVTTPEEIAQVATISANGDTAIGKLIADAMK 696
A+ ++ LK + + + EEI QVATISANG+ IG LI+ AM+
Sbjct: 237 NKAISSITTHLKSKAWIINSSEEINQVATISANGEKEIGDLISKAME 283
>12_01_1011 +
10292709-10292765,10293003-10293156,10294062-10294183,
10294288-10294495,10294644-10294789,10294920-10295226,
10295666-10296117,10296388-10296678
Length = 578
Score = 164 bits (399), Expect = 5e-41
Identities = 79/164 (48%), Positives = 115/164 (70%)
Frame = +1
Query: 202 AKDVRFGADVRALMLQGVDILADAVAVTMGPKGRNVILEQSWGSPKITKDGVTVAKGVEL 381
AKD+ F RA + GV+ LA+AV VT+GP+GRNV+L++ +GSPK+ DGVT+A+ +EL
Sbjct: 39 AKDIAFDQKSRAALQAGVEKLANAVGVTLGPRGRNVVLDE-YGSPKVVNDGVTIARAIEL 97
Query: 382 KDKFQNIGAKLVQNVANNTNEEAGDGTTTATVLARAIAKEGFEKISKGANPIEIRRGVML 561
D +N GA L++ VA+ TN+ AGDGTTTA+VLAR I K G ++ GANP+ +++G+
Sbjct: 98 YDPMENAGAALIREVASKTNDSAGDGTTTASVLAREIIKLGLLSVTSGANPVSLKKGIDK 157
Query: 562 AVDAVKEKLKGMSKPVTTPEEIAQVATISANGDTAIGKLIADAM 693
V + E+L+ ++PV +I VA+ISA D IG +IADA+
Sbjct: 158 TVHGLIEELEKKARPVKGSGDIKAVASISAGNDELIGSMIADAI 201
>06_01_0097 -
810283-810296,810398-810521,810974-811066,811144-811236,
811410-811514,811661-811732,811857-811934,812210-812379,
812507-812741,812832-813074,813243-813338,813445-813582,
814014-814139,814235-814453
Length = 601
Score = 163 bits (395), Expect = 2e-40
Identities = 86/166 (51%), Positives = 116/166 (69%), Gaps = 2/166 (1%)
Frame = +1
Query: 202 AKDVRFGADVRALM-LQ-GVDILADAVAVTMGPKGRNVILEQSWGSPKITKDGVTVAKGV 375
AK++ F D A+ LQ GV+ LAD V VT+GPKGRNV+LE +GSP+I DGVTVA+ V
Sbjct: 57 AKELYFNKDGSAIKKLQTGVNKLADLVGVTLGPKGRNVVLESKYGSPRIVNDGVTVAREV 116
Query: 376 ELKDKFQNIGAKLVQNVANNTNEEAGDGTTTATVLARAIAKEGFEKISKGANPIEIRRGV 555
EL+D +NIGAKLV+ A TN+ AGDGTTT+ VLA+ + EG + ++ GANP++I RG+
Sbjct: 117 ELEDPVENIGAKLVRQAAAKTNDLAGDGTTTSVVLAQGLIAEGVKVVAAGANPVQITRGI 176
Query: 556 MLAVDAVKEKLKGMSKPVTTPEEIAQVATISANGDTAIGKLIADAM 693
A+ E+LK +SK V E+A VA +SA + IG +IA+AM
Sbjct: 177 EKTAKALVEELKKLSKEV-EDSELADVAAVSAGNNYEIGNMIAEAM 221
>02_01_0024 +
159595-159801,159892-160017,160201-160338,160431-160526,
160958-161200,161249-161537,161612-161781,161975-162052,
162156-162227,162345-162449,162555-162647,162737-162829,
163109-163235,163317-163330
Length = 616
Score = 162 bits (394), Expect = 2e-40
Identities = 85/166 (51%), Positives = 114/166 (68%), Gaps = 2/166 (1%)
Frame = +1
Query: 202 AKDVRFGADVRAL--MLQGVDILADAVAVTMGPKGRNVILEQSWGSPKITKDGVTVAKGV 375
AK++ F D A+ + GV+ LAD V VT+GPKGRNV+LE +GSPKI DGVTVAK V
Sbjct: 53 AKELYFNKDGLAIKKLQNGVNKLADLVGVTLGPKGRNVVLESKYGSPKIVNDGVTVAKEV 112
Query: 376 ELKDKFQNIGAKLVQNVANNTNEEAGDGTTTATVLARAIAKEGFEKISKGANPIEIRRGV 555
EL+D +NIGAKLV+ A TN+ AGDGTTT+ VLA+ + EG + ++ GANP++I RG+
Sbjct: 113 ELEDPVENIGAKLVRQAAAKTNDLAGDGTTTSVVLAQGMITEGVKVVAAGANPVQITRGI 172
Query: 556 MLAVDAVKEKLKGMSKPVTTPEEIAQVATISANGDTAIGKLIADAM 693
A+ +L+ MSK V E+A VA +SA + IG +IA+AM
Sbjct: 173 EKTAKALVSELQKMSKEV-EDSELADVAAVSAGNNYEIGNMIAEAM 217
>03_06_0760 -
36067752-36068045,36068260-36068711,36069263-36069569,
36069719-36069864,36069989-36070196,36070339-36070460,
36070621-36070789,36070875-36070931
Length = 584
Score = 161 bits (392), Expect = 4e-40
Identities = 79/167 (47%), Positives = 116/167 (69%)
Frame = +1
Query: 193 RFYAKDVRFGADVRALMLQGVDILADAVAVTMGPKGRNVILEQSWGSPKITKDGVTVAKG 372
R AK++ F R+ + GV+ LA AVAVT+GP+GRNV+L++ +GSPK+ DGVT+A+
Sbjct: 41 RASAKEIAFDQGSRSSLQAGVEKLAAAVAVTLGPRGRNVVLDE-FGSPKVVNDGVTIARA 99
Query: 373 VELKDKFQNIGAKLVQNVANNTNEEAGDGTTTATVLARAIAKEGFEKISKGANPIEIRRG 552
+EL D +N GA L++ VA+ TN+ AGDGTTTA+VLAR I K G ++ GANP+ I++G
Sbjct: 100 IELADPMENAGAALIREVASKTNDSAGDGTTTASVLAREIIKLGLLSVTSGANPVSIKKG 159
Query: 553 VMLAVDAVKEKLKGMSKPVTTPEEIAQVATISANGDTAIGKLIADAM 693
+ V ++ E+L+ S+PV +I VA ISA D +G +IA+A+
Sbjct: 160 IDKTVHSLVEELEKKSRPVKGSGDIKAVAAISAGNDDFVGTMIAEAI 206
>09_06_0292 + 22075647-22075691,22077394-22077507,22077602-22077841,
22077926-22078003,22078094-22078162,22078420-22078545,
22079108-22079188,22079272-22079460,22079597-22080434,
22082290-22082411,22082482-22082701,22082910-22083055,
22083260-22083566,22083886-22084136,22084294-22084533,
22084930-22085238
Length = 1124
Score = 115 bits (276), Expect = 4e-26
Identities = 60/141 (42%), Positives = 88/141 (62%), Gaps = 4/141 (2%)
Frame = +1
Query: 286 MGPKGRNVILEQSWGSPKITKDGVTVAKGVELKDKFQNIGAKLVQN----VANNTNEEAG 453
+ GRNV+++Q PK+ DG+T+AK +EL + ++ GA L+Q +A+ TN G
Sbjct: 590 LSTSGRNVVIDQD-DVPKVINDGITIAKAIELPNAVEHAGAMLLQEHVNQIASKTNSSVG 648
Query: 454 DGTTTATVLARAIAKEGFEKISKGANPIEIRRGVMLAVDAVKEKLKGMSKPVTTPEEIAQ 633
DGTTTA +LAR I G ++ GANP+ +R+G+ AV + LK PV+T E+I
Sbjct: 649 DGTTTAIILAREIINLGLLAVATGANPVALRKGIDKAVHELIGILKTKCIPVSTKEDIKA 708
Query: 634 VATISANGDTAIGKLIADAMK 696
VA+ISA D +G LIADA++
Sbjct: 709 VASISAGNDEYVGDLIADALE 729
>03_05_0339 +
23287620-23287676,23287784-23287849,23287937-23288048,
23288240-23288368,23288795-23288866,23289245-23289360,
23289494-23289570,23289788-23290273,23290373-23290688,
23290769-23290915
Length = 525
Score = 65.7 bits (153), Expect = 3e-11
Identities = 41/126 (32%), Positives = 66/126 (52%), Gaps = 3/126 (2%)
Frame = +1
Query: 220 GADVRALMLQGVDILADAVAVTMGPKGRNVILEQSWG---SPKITKDGVTVAKGVELKDK 390
G R G +AD V T+GPKG + IL QS G S +T DG T+ K + +
Sbjct: 14 GERARMAAFIGAMAIADLVKTTLGPKGMDKIL-QSTGRGRSVTVTNDGATILKSLHI--- 69
Query: 391 FQNIGAKLVQNVANNTNEEAGDGTTTATVLARAIAKEGFEKISKGANPIEIRRGVMLAVD 570
N AK++ +++ ++E GDGTT+ VLA + +E + ++ +P+ I G +AV+
Sbjct: 70 -DNPAAKVLVDISKVQDDEVGDGTTSVVVLAGELLREAEKLVNMKIHPMTIIAGYRMAVE 128
Query: 571 AVKEKL 588
+ L
Sbjct: 129 CARNAL 134
>06_03_1193 -
28298656-28298754,28299303-28299377,28299456-28299544,
28299679-28299760,28300385-28300474,28300557-28300655,
28300733-28300852,28300968-28301084,28301174-28301309,
28301415-28301584,28301744-28301947,28302032-28302157,
28302841-28303101,28303215-28303229
Length = 560
Score = 64.5 bits (150), Expect = 8e-11
Identities = 34/117 (29%), Positives = 60/117 (51%)
Frame = +1
Query: 259 ILADAVAVTMGPKGRNVILEQSWGSPKITKDGVTVAKGVELKDKFQNIGAKLVQNVANNT 438
++AD V T+GP+G + ++ G I+ DG T+ + +++ AK++ ++A +
Sbjct: 34 VVADTVRTTLGPRGMDKLIHDDKGGTTISNDGATIMRLLDIIHP----AAKILVDIAKSQ 89
Query: 439 NEEAGDGTTTATVLARAIAKEGFEKISKGANPIEIRRGVMLAVDAVKEKLKGMSKPV 609
+ E GDGTTT +LA KE I G +P + R A EK+K ++ +
Sbjct: 90 DSEVGDGTTTVVLLAAEFLKEAKPYIEDGVHPHSLIRSYRTAGHLAIEKVKDLATSI 146
>02_02_0739 - 13560241-13560622,13561192-13561239,13563727-13564949
Length = 550
Score = 62.5 bits (145), Expect = 3e-10
Identities = 39/147 (26%), Positives = 68/147 (46%)
Frame = +1
Query: 208 DVRFGADVRALMLQGVDILADAVAVTMGPKGRNVILEQSWGSPKITKDGVTVAKGVELKD 387
D + DVR L + +ADAV ++GP+G + ++ IT DG T+ + L
Sbjct: 20 DTKRRDDVRGLNIAAARAVADAVRTSLGPRGMDKMISSGEQEVIITNDGATILSRMSLLQ 79
Query: 388 KFQNIGAKLVQNVANNTNEEAGDGTTTATVLARAIAKEGFEKISKGANPIEIRRGVMLAV 567
A+++ ++ + + AGDGTTT VLA ++ + +S GA+P +
Sbjct: 80 P----AARMLAELSRSQDAAAGDGTTTVVVLAGSLLRRAQSLLSAGAHPTAAADALHRLA 135
Query: 568 DAVKEKLKGMSKPVTTPEEIAQVATIS 648
E L M+ P+ + + V + S
Sbjct: 136 TRAVEVLHAMAIPIELSDRDSLVKSAS 162
>10_08_0620 - 19321612-19323237
Length = 541
Score = 59.7 bits (138), Expect = 2e-09
Identities = 44/151 (29%), Positives = 72/151 (47%), Gaps = 4/151 (2%)
Frame = +1
Query: 208 DVRFGADVRALMLQGVDILADAVAVTMGPKGRN-VILEQSWGSPK---ITKDGVTVAKGV 375
D + DVR L + +A A ++GP+G + +I S G + IT DG T+ +
Sbjct: 20 DTKRRDDVRGLNIAAGRAVAAAARTSLGPRGMDKMISSSSSGGDQAVIITNDGATILSRM 79
Query: 376 ELKDKFQNIGAKLVQNVANNTNEEAGDGTTTATVLARAIAKEGFEKISKGANPIEIRRGV 555
L A+++ +++ + + AGDGTTT VLA ++ + +S GA+P +
Sbjct: 80 PLLQP----AARMLADLSRSQDAAAGDGTTTVVVLAGSLLRRAQSLLSAGAHPTAAADAL 135
Query: 556 MLAVDAVKEKLKGMSKPVTTPEEIAQVATIS 648
L E L GM+ PV + A V + S
Sbjct: 136 HLLAARAVEVLHGMAIPVELSDRDALVKSAS 166
>06_03_0477 -
21250811-21250981,21251261-21251374,21251447-21251613,
21252051-21252153,21252315-21252367,21252438-21252570,
21252835-21253183,21253685-21254003,21254519-21254717
Length = 535
Score = 58.8 bits (136), Expect = 4e-09
Identities = 34/127 (26%), Positives = 67/127 (52%)
Frame = +1
Query: 220 GADVRALMLQGVDILADAVAVTMGPKGRNVILEQSWGSPKITKDGVTVAKGVELKDKFQN 399
G D + + +A + ++GPKG + +L+ G IT DG T+ + +++ ++
Sbjct: 26 GLDAQKANIAAGKAVARILRTSLGPKGMDKMLQSPDGDVTITNDGATILEQMDVDNQI-- 83
Query: 400 IGAKLVQNVANNTNEEAGDGTTTATVLARAIAKEGFEKISKGANPIEIRRGVMLAVDAVK 579
AKL+ ++ + + E GDGTT V+A ++ ++ + + +G +PI I G LA
Sbjct: 84 --AKLMVELSCSQDYEIGDGTTGVVVMAGSLLEQAEKLLERGIHPIRIAEGYELASRIAF 141
Query: 580 EKLKGMS 600
+ L+ +S
Sbjct: 142 DHLEHIS 148
>02_02_0253 -
8325437-8325628,8325705-8325779,8325933-8326037,
8326249-8326374,8326451-8326835,8326931-8327208,
8327294-8327367,8327476-8327547,8327637-8327705,
8340132-8340201,8340806-8340873,8341571-8341643,
8341807-8341868,8342168-8342198
Length = 559
Score = 57.6 bits (133), Expect = 9e-09
Identities = 43/160 (26%), Positives = 71/160 (44%), Gaps = 4/160 (2%)
Frame = +1
Query: 220 GADVRALMLQGVDILADAVAVTMGPKGRNVILEQSWGSPKITKDGVTVAKGVELKDKFQN 399
G V +Q +AD + T+GP+ +L + G +T DG + + ++L
Sbjct: 19 GTKVHHANIQAAKAVADIIRTTLGPQSMLKMLLDAAGGIVVTNDGNCILRELDLAHP--- 75
Query: 400 IGAKLVQNVANNTNEEAGDGTTTATVLARAIAKEGFEKISKGANPIEIRRGVMLAVDAVK 579
AK + ++ +EE GDGTT+ VLA + I K +P I R A+D
Sbjct: 76 -AAKSMIELSRTQDEEVGDGTTSVIVLAGEMLHVAQAFIDKNYHPTVICRAYTKALDDAL 134
Query: 580 EKLKGMSKPVTTPEEIAQVATISANGDT----AIGKLIAD 687
L ++ PV + +A + + ++ T G LIAD
Sbjct: 135 SVLDKIAIPVDVDDRVAMLGLVKSSIGTKFTGQFGDLIAD 174
>05_07_0067 +
27463703-27463705,27464309-27464365,27464779-27464844,
27464985-27465096,27465281-27465409,27466076-27466191,
27466364-27466440,27466678-27467163,27467255-27467570,
27467618-27467797
Length = 513
Score = 56.8 bits (131), Expect = 2e-08
Identities = 36/111 (32%), Positives = 59/111 (53%), Gaps = 3/111 (2%)
Frame = +1
Query: 220 GADVRALMLQGVDILADAVAVTMGPKGRNVILEQSWG---SPKITKDGVTVAKGVELKDK 390
G R G ++D V T+GPKG + IL QS G S +T DG T+ K + +
Sbjct: 15 GERARMASFVGGMAISDLVKTTLGPKGMDKIL-QSTGRGRSVTVTNDGATILKSLHI--- 70
Query: 391 FQNIGAKLVQNVANNTNEEAGDGTTTATVLARAIAKEGFEKISKGANPIEI 543
N AK++ +++ ++E GDGTT+ VLA + +E + ++ +P+ I
Sbjct: 71 -DNPAAKVLVDISKVQDDEVGDGTTSVVVLAGELLREAEKLVNMKIHPMTI 120
>05_01_0337 -
2658647-2658722,2658797-2658915,2658995-2659102,
2659187-2659255,2659561-2659655,2659740-2659944,
2660125-2660211,2660291-2660405,2660696-2660802,
2661054-2661146,2661243-2661290,2661345-2661544,
2661993-2662128,2662228-2662291,2662779-2662912
Length = 551
Score = 51.6 bits (118), Expect = 6e-07
Identities = 35/121 (28%), Positives = 58/121 (47%)
Frame = +1
Query: 262 LADAVAVTMGPKGRNVILEQSWGSPKITKDGVTVAKGVELKDKFQNIGAKLVQNVANNTN 441
L D + +GPKG +L G K+TKDG T+ K +++ QN A ++ A +
Sbjct: 29 LQDVLKTNLGPKGTIKMLVGGAGDIKLTKDGNTLLKEMQI----QNPTAIMIARTAVAQD 84
Query: 442 EEAGDGTTTATVLARAIAKEGFEKISKGANPIEIRRGVMLAVDAVKEKLKGMSKPVTTPE 621
+ +GDGTT+ + + K+ I +G +P + G +A A E L+ V +
Sbjct: 85 DTSGDGTTSTVLFIGELMKQSERCIDEGTHPRFLVDGFDVAKRATLEFLEKFKTSVVMGD 144
Query: 622 E 624
E
Sbjct: 145 E 145
>06_03_0353 +
19810945-19810975,19811308-19811369,19811741-19811813,
19813292-19813359,19813496-19813565,19813908-19813976,
19814065-19814136,19814247-19814320,19814420-19814697,
19814804-19815188,19815268-19815393,19815583-19815687,
19815986-19815994,19817040-19817114,19817202-19817390
Length = 561
Score = 50.8 bits (116), Expect = 1e-06
Identities = 40/160 (25%), Positives = 69/160 (43%), Gaps = 4/160 (2%)
Frame = +1
Query: 220 GADVRALMLQGVDILADAVAVTMGPKGRNVILEQSWGSPKITKDGVTVAKGVELKDKFQN 399
G V +Q +AD + T+GP+ +L + G +T DG + + +++
Sbjct: 19 GTKVHHANIQAAKAVADIIRTTLGPRSMLKMLLDASGGIVVTNDGNAILREIDIAHP--- 75
Query: 400 IGAKLVQNVANNTNEEAGDGTTTATVLARAIAKEGFEKISKGANPIEIRRGVMLAVDAVK 579
AK + ++ +EE GDGTT+ VLA + I K +P I R A++
Sbjct: 76 -AAKSMIELSRTQDEEVGDGTTSVIVLAGEMLHVAEAFIDKHYHPTVICRAYTKALEDAL 134
Query: 580 EKLKGMSKPVTTPEEIAQVATISANGDT----AIGKLIAD 687
L ++ V + A + + ++ T G LIAD
Sbjct: 135 AVLDKIAMHVDVNDRAAMLGLVKSSIGTKFTGQFGDLIAD 174
>04_04_0729 +
27612106-27612195,27612284-27612370,27612469-27612528,
27612554-27612688,27612769-27612864,27613149-27613214,
27613647-27613864,27614093-27614189,27614605-27614691,
27614892-27615026,27615121-27615225,27615717-27615845,
27615925-27616028,27616598-27616688,27616774-27616857
Length = 527
Score = 42.3 bits (95), Expect = 4e-04
Identities = 23/78 (29%), Positives = 40/78 (51%)
Frame = +1
Query: 328 GSPKITKDGVTVAKGVELKDKFQNIGAKLVQNVANNTNEEAGDGTTTATVLARAIAKEGF 507
G IT DG T+ + +E+ ++ AK++ +A + E GDGTT+ ++A + K G
Sbjct: 7 GDVTITNDGATILRMLEV----EHPAAKVLVELAELQDREVGDGTTSVVIIAAELLKRGN 62
Query: 508 EKISKGANPIEIRRGVML 561
+ + +P I G L
Sbjct: 63 DLVRNKIHPTSIISGYRL 80
>02_01_0255 -
1674417-1674488,1674670-1675322,1676132-1676195,
1676295-1676381
Length = 291
Score = 30.3 bits (65), Expect = 1.5
Identities = 22/70 (31%), Positives = 33/70 (47%)
Frame = +1
Query: 460 TTTATVLARAIAKEGFEKISKGANPIEIRRGVMLAVDAVKEKLKGMSKPVTTPEEIAQVA 639
TTT L RA+A E ++R G+ + D K L K TP+ A+VA
Sbjct: 25 TTTTKELGRAVAAEASCGSRAAVGLGDMRVGISDSSDRAKSCLHPCDKK-DTPQVTAEVA 83
Query: 640 TISANGDTAI 669
T S +G+ ++
Sbjct: 84 TRSEDGEPSL 93
>03_05_0205 - 21965782-21965979,21969169-21969417
Length = 148
Score = 29.5 bits (63), Expect = 2.7
Identities = 18/53 (33%), Positives = 23/53 (43%)
Frame = +1
Query: 274 VAVTMGPKGRNVILEQSWGSPKITKDGVTVAKGVELKDKFQNIGAKLVQNVAN 432
V V G +G Q G P+ +G A+ VEL KF I A V A+
Sbjct: 37 VGVAPGHRGMAASAGQEGGPPRDFSEGAVRARVVELVKKFDRIDADKVTETAD 89
>03_06_0302 -
32981404-32981538,32981619-32981678,32981800-32981877,
32982264-32982341,32982516-32982592,32983271-32983445,
32983532-32983678,32984407-32984496
Length = 279
Score = 28.7 bits (61), Expect = 4.7
Identities = 27/82 (32%), Positives = 40/82 (48%), Gaps = 9/82 (10%)
Frame = +1
Query: 463 TTATVLARAIAK--EGFEKISKGANPIEIRRGVMLAVDAVKEKLKGMS-KPV------TT 615
TT T + IAK EGF + R V L V+ + +++K ++ KPV +T
Sbjct: 170 TTPTERMKEIAKASEGFIYLVSSVGVTGARSNVNLRVEYLLQEIKKVTDKPVAVGFGIST 229
Query: 616 PEEIAQVATISANGDTAIGKLI 681
PE + Q+A A+G IG I
Sbjct: 230 PEHVKQIAGWGADG-VIIGSAI 250
>11_04_0340 -
16536571-16536705,16536820-16536951,16537265-16538106,
16538480-16538940,16539032-16540314,16540423-16541627,
16541857-16542157
Length = 1452
Score = 28.3 bits (60), Expect = 6.2
Identities = 10/31 (32%), Positives = 21/31 (67%)
Frame = +1
Query: 58 LREIRFAAVWTLIEILLISKQFLKMLRLPRV 150
LRE++ +W L+E+ + S + L ++ LP++
Sbjct: 839 LRELKLVKMWNLVELSIPSLEKLILIELPKL 869
>10_01_0030 -
386008-388056,388166-388360,388931-389062,389167-389538,
389753-389894,392274-392533,392737-393015,394796-394939
Length = 1190
Score = 28.3 bits (60), Expect = 6.2
Identities = 17/48 (35%), Positives = 26/48 (54%), Gaps = 1/48 (2%)
Frame = +1
Query: 295 KGRNVILEQSWGSPKITKDGVTVAKGVELKDKFQNIGA-KLVQNVANN 435
KG V+ + SWG TKDG+ + L D F N + ++QN+ +N
Sbjct: 103 KGPGVVQDDSWGGLSTTKDGL-----LTLLDCFINTNSLHVLQNIFDN 145
>03_05_0820 +
27951971-27954236,27954746-27955008,27955169-27955288,
27957790-27957856,27958310-27958515
Length = 973
Score = 28.3 bits (60), Expect = 6.2
Identities = 10/21 (47%), Positives = 15/21 (71%)
Frame = -3
Query: 87 PNCCKPYFSKILAGFVKRDLP 25
P C P+F+ ++AGFV +LP
Sbjct: 206 PLCSVPFFTAMIAGFVLNELP 226
>12_02_0555 - 20410659-20410898
Length = 79
Score = 27.9 bits (59), Expect = 8.2
Identities = 15/41 (36%), Positives = 20/41 (48%)
Frame = +1
Query: 403 GAKLVQNVANNTNEEAGDGTTTATVLARAIAKEGFEKISKG 525
GA Q VAN T +E G + LA + +G +SKG
Sbjct: 12 GASEEQRVANTTVDEIGKTPLSEVELAELVQAQGAIMVSKG 52
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,466,915
Number of Sequences: 37544
Number of extensions: 301842
Number of successful extensions: 941
Number of sequences better than 10.0: 25
Number of HSP's better than 10.0 without gapping: 912
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 928
length of database: 14,793,348
effective HSP length: 80
effective length of database: 11,789,828
effective search space used: 1792053856
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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