Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmmt24d10
(239 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
DQ071552-1|AAY82248.1| 495|Apis mellifera anarchy 1 protein. 22 1.2
AB270697-1|BAF75928.1| 735|Apis mellifera FoxP protein protein. 21 1.6
AB269871-1|BAF03050.1| 1923|Apis mellifera cell adhesion molecul... 21 2.8
AB257298-1|BAE93381.1| 1919|Apis mellifera Dscam family member A... 21 2.8
AM076717-1|CAJ28210.1| 501|Apis mellifera serotonin receptor pr... 20 3.7
AB264313-1|BAF43600.1| 900|Apis mellifera ecdysone-induced prot... 20 3.7
AY937243-1|AAX33677.1| 1370|Apis mellifera Toll-like receptor pr... 20 4.9
AY921579-1|AAX14899.1| 996|Apis mellifera ephrin receptor protein. 20 4.9
AY331183-1|AAP94623.1| 953|Apis mellifera NMDA-type glutamate r... 19 6.4
AY703618-1|AAU12614.1| 136|Apis mellifera wingless protein. 19 8.5
AY222546-1|AAP69221.1| 135|Apis mellifera wingless protein. 19 8.5
>DQ071552-1|AAY82248.1| 495|Apis mellifera anarchy 1 protein.
Length = 495
Score = 21.8 bits (44), Expect = 1.2
Identities = 12/21 (57%), Positives = 14/21 (66%), Gaps = 3/21 (14%)
Frame = +2
Query: 161 TTSTTYQQQ---VFIHNSDIL 214
TTSTT Q+ VF+ N DIL
Sbjct: 393 TTSTTISQKHIKVFVVNKDIL 413
>AB270697-1|BAF75928.1| 735|Apis mellifera FoxP protein protein.
Length = 735
Score = 21.4 bits (43), Expect = 1.6
Identities = 9/21 (42%), Positives = 14/21 (66%), Gaps = 4/21 (19%)
Frame = -3
Query: 108 RPVLEQRKQQP----PGPIPT 58
+P++ Q+ QQP PGP P+
Sbjct: 6 QPIITQQSQQPSSGAPGPQPS 26
>AB269871-1|BAF03050.1| 1923|Apis mellifera cell adhesion molecule
AbsCAM-Ig7B protein.
Length = 1923
Score = 20.6 bits (41), Expect = 2.8
Identities = 7/11 (63%), Positives = 9/11 (81%)
Frame = -3
Query: 96 EQRKQQPPGPI 64
+QRKQQ PG +
Sbjct: 1770 QQRKQQTPGDV 1780
Score = 19.8 bits (39), Expect = 4.9
Identities = 10/21 (47%), Positives = 12/21 (57%)
Frame = +2
Query: 140 RGVVTAKTTSTTYQQQVFIHN 202
R VVT S+ YQ +V HN
Sbjct: 1556 RFVVTNLQPSSVYQLKVETHN 1576
>AB257298-1|BAE93381.1| 1919|Apis mellifera Dscam family member
AbsCAM-Ig7A protein.
Length = 1919
Score = 20.6 bits (41), Expect = 2.8
Identities = 7/11 (63%), Positives = 9/11 (81%)
Frame = -3
Query: 96 EQRKQQPPGPI 64
+QRKQQ PG +
Sbjct: 1766 QQRKQQTPGDV 1776
Score = 19.8 bits (39), Expect = 4.9
Identities = 10/21 (47%), Positives = 12/21 (57%)
Frame = +2
Query: 140 RGVVTAKTTSTTYQQQVFIHN 202
R VVT S+ YQ +V HN
Sbjct: 1552 RFVVTNLQPSSVYQLKVETHN 1572
>AM076717-1|CAJ28210.1| 501|Apis mellifera serotonin receptor
protein.
Length = 501
Score = 20.2 bits (40), Expect = 3.7
Identities = 10/25 (40%), Positives = 11/25 (44%)
Frame = +2
Query: 92 CSSTGRPHHYRL*VHSRGVVTAKTT 166
CS T PH +L H A TT
Sbjct: 349 CSVTNSPHQKKLRFHLAKERKASTT 373
>AB264313-1|BAF43600.1| 900|Apis mellifera ecdysone-induced protein
75 protein.
Length = 900
Score = 20.2 bits (40), Expect = 3.7
Identities = 10/25 (40%), Positives = 14/25 (56%), Gaps = 1/25 (4%)
Frame = -3
Query: 108 RPVLEQRKQQPPGPIPTLGP-KILS 37
+P+ +K P P P +GP K LS
Sbjct: 873 QPLNLSKKSPSPSPRPLVGPCKALS 897
>AY937243-1|AAX33677.1| 1370|Apis mellifera Toll-like receptor
protein.
Length = 1370
Score = 19.8 bits (39), Expect = 4.9
Identities = 7/10 (70%), Positives = 8/10 (80%)
Frame = -3
Query: 90 RKQQPPGPIP 61
R+QQPP P P
Sbjct: 1351 RQQQPPPPPP 1360
>AY921579-1|AAX14899.1| 996|Apis mellifera ephrin receptor protein.
Length = 996
Score = 19.8 bits (39), Expect = 4.9
Identities = 8/18 (44%), Positives = 10/18 (55%)
Frame = +2
Query: 149 VTAKTTSTTYQQQVFIHN 202
+T TTY+ QVF N
Sbjct: 379 ITGLNAVTTYRFQVFAEN 396
>AY331183-1|AAP94623.1| 953|Apis mellifera NMDA-type glutamate
receptor 1 protein.
Length = 953
Score = 19.4 bits (38), Expect = 6.4
Identities = 6/11 (54%), Positives = 9/11 (81%)
Frame = +2
Query: 176 YQQQVFIHNSD 208
Y + +FIH+SD
Sbjct: 167 YMKVIFIHSSD 177
>AY703618-1|AAU12614.1| 136|Apis mellifera wingless protein.
Length = 136
Score = 19.0 bits (37), Expect = 8.5
Identities = 5/9 (55%), Positives = 8/9 (88%)
Frame = -2
Query: 181 LICCRRGFR 155
L+CC RG++
Sbjct: 115 LMCCGRGYK 123
>AY222546-1|AAP69221.1| 135|Apis mellifera wingless protein.
Length = 135
Score = 19.0 bits (37), Expect = 8.5
Identities = 5/9 (55%), Positives = 8/9 (88%)
Frame = -2
Query: 181 LICCRRGFR 155
L+CC RG++
Sbjct: 116 LMCCGRGYK 124
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 63,860
Number of Sequences: 438
Number of extensions: 933
Number of successful extensions: 13
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 13
length of database: 146,343
effective HSP length: 47
effective length of database: 125,757
effective search space used: 4024224
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 37 (19.9 bits)
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