Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmmt24d08
         (378 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ325130-1|ABD14144.1|  174|Apis mellifera complementary sex det...    21   3.6  
DQ325129-1|ABD14143.1|  174|Apis mellifera complementary sex det...    21   3.6  
DQ325128-1|ABD14142.1|  174|Apis mellifera complementary sex det...    21   3.6  
DQ325127-1|ABD14141.1|  174|Apis mellifera complementary sex det...    21   3.6  
DQ325126-1|ABD14140.1|  174|Apis mellifera complementary sex det...    21   3.6  
DQ325125-1|ABD14139.1|  174|Apis mellifera complementary sex det...    21   3.6  
DQ244074-1|ABB36784.1|  517|Apis mellifera cytochrome P450 monoo...    21   4.8  
DQ435329-1|ABD92644.1|  150|Apis mellifera OBP12 protein.              20   8.4  
DQ011226-1|AAY63895.1|  471|Apis mellifera Rh-like protein protein.    20   8.4  

>DQ325130-1|ABD14144.1|  174|Apis mellifera complementary sex
           determiner protein.
          Length = 174

 Score = 21.4 bits (43), Expect = 3.6
 Identities = 8/16 (50%), Positives = 11/16 (68%)
 Frame = +2

Query: 296 YNYKNYVS*NVRKLNY 343
           YNY NY + N ++L Y
Sbjct: 89  YNYSNYNNNNYKQLCY 104


>DQ325129-1|ABD14143.1|  174|Apis mellifera complementary sex
           determiner protein.
          Length = 174

 Score = 21.4 bits (43), Expect = 3.6
 Identities = 8/16 (50%), Positives = 11/16 (68%)
 Frame = +2

Query: 296 YNYKNYVS*NVRKLNY 343
           YNY NY + N ++L Y
Sbjct: 89  YNYSNYNNNNYKQLCY 104


>DQ325128-1|ABD14142.1|  174|Apis mellifera complementary sex
           determiner protein.
          Length = 174

 Score = 21.4 bits (43), Expect = 3.6
 Identities = 8/16 (50%), Positives = 11/16 (68%)
 Frame = +2

Query: 296 YNYKNYVS*NVRKLNY 343
           YNY NY + N ++L Y
Sbjct: 89  YNYSNYNNNNYKQLCY 104


>DQ325127-1|ABD14141.1|  174|Apis mellifera complementary sex
           determiner protein.
          Length = 174

 Score = 21.4 bits (43), Expect = 3.6
 Identities = 8/16 (50%), Positives = 11/16 (68%)
 Frame = +2

Query: 296 YNYKNYVS*NVRKLNY 343
           YNY NY + N ++L Y
Sbjct: 89  YNYSNYNNNNYKQLCY 104


>DQ325126-1|ABD14140.1|  174|Apis mellifera complementary sex
           determiner protein.
          Length = 174

 Score = 21.4 bits (43), Expect = 3.6
 Identities = 8/16 (50%), Positives = 11/16 (68%)
 Frame = +2

Query: 296 YNYKNYVS*NVRKLNY 343
           YNY NY + N ++L Y
Sbjct: 89  YNYSNYNNNNYKQLCY 104


>DQ325125-1|ABD14139.1|  174|Apis mellifera complementary sex
           determiner protein.
          Length = 174

 Score = 21.4 bits (43), Expect = 3.6
 Identities = 8/16 (50%), Positives = 11/16 (68%)
 Frame = +2

Query: 296 YNYKNYVS*NVRKLNY 343
           YNY NY + N ++L Y
Sbjct: 89  YNYSNYNNNNYKQLCY 104


>DQ244074-1|ABB36784.1|  517|Apis mellifera cytochrome P450
           monooxygenase protein.
          Length = 517

 Score = 21.0 bits (42), Expect = 4.8
 Identities = 9/19 (47%), Positives = 13/19 (68%)
 Frame = +3

Query: 42  NTIILVIGV*CRFLKPDST 98
           +T  L++G    FLKPDS+
Sbjct: 214 STCTLILGRHLGFLKPDSS 232


>DQ435329-1|ABD92644.1|  150|Apis mellifera OBP12 protein.
          Length = 150

 Score = 20.2 bits (40), Expect = 8.4
 Identities = 7/12 (58%), Positives = 9/12 (75%)
 Frame = -1

Query: 207 ECEVALICSICM 172
           EC+VAL   +CM
Sbjct: 131 ECDVALSFKLCM 142


>DQ011226-1|AAY63895.1|  471|Apis mellifera Rh-like protein protein.
          Length = 471

 Score = 20.2 bits (40), Expect = 8.4
 Identities = 8/13 (61%), Positives = 10/13 (76%)
 Frame = -3

Query: 313 IIFIIVQGKLMTW 275
           I+ IIV G LMT+
Sbjct: 18  IVLIIVMGALMTY 30


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 101,789
Number of Sequences: 438
Number of extensions: 1924
Number of successful extensions: 9
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9
length of database: 146,343
effective HSP length: 51
effective length of database: 124,005
effective search space used:  9176370
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.2 bits)