BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmmt24d01
(692 letters)
Database: mosquito
2352 sequences; 563,979 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY745211-1|AAU93478.1| 86|Anopheles gambiae cytochrome P450 pr... 24 4.0
DQ437579-1|ABD96049.1| 575|Anopheles gambiae short neuropeptide... 24 5.2
AF510715-1|AAP47144.1| 470|Anopheles gambiae Rh-like glycoprote... 24 5.2
AY146726-1|AAO12086.1| 136|Anopheles gambiae odorant-binding pr... 23 6.9
AJ237706-1|CAB40347.1| 570|Anopheles gambiae putative 5'-nucleo... 23 9.1
AF008575-1|AAB87764.1| 525|Anopheles gambiae chitinase protein. 23 9.1
>AY745211-1|AAU93478.1| 86|Anopheles gambiae cytochrome P450
protein.
Length = 86
Score = 24.2 bits (50), Expect = 4.0
Identities = 8/14 (57%), Positives = 13/14 (92%)
Frame = +3
Query: 651 LCMHYVISMVLTRY 692
L MHY++SM+LT++
Sbjct: 42 LQMHYLLSMILTKF 55
>DQ437579-1|ABD96049.1| 575|Anopheles gambiae short neuropeptide F
receptor protein.
Length = 575
Score = 23.8 bits (49), Expect = 5.2
Identities = 8/19 (42%), Positives = 12/19 (63%)
Frame = +1
Query: 127 FLWFQ*NFRESFKRNIFCF 183
+ W NFR+ FK+ + CF
Sbjct: 380 YAWLNDNFRKEFKQVLPCF 398
>AF510715-1|AAP47144.1| 470|Anopheles gambiae Rh-like glycoprotein
protein.
Length = 470
Score = 23.8 bits (49), Expect = 5.2
Identities = 12/27 (44%), Positives = 15/27 (55%)
Frame = -3
Query: 294 RLDMPVM*TSTTASGVLXGSVINNPFH 214
+LDM + ST A GV GS+ N H
Sbjct: 274 KLDMVHVQNSTLAGGVAVGSICNLLIH 300
>AY146726-1|AAO12086.1| 136|Anopheles gambiae odorant-binding
protein AgamOBP19 protein.
Length = 136
Score = 23.4 bits (48), Expect = 6.9
Identities = 17/48 (35%), Positives = 22/48 (45%)
Frame = -3
Query: 537 SSTEDFKCCKDCFLTFGISKSPNTFEYDKS*SESLKLIFTSLLPPXVK 394
+ T+DFKC C L Y+K SLK I T +LP +K
Sbjct: 53 ADTKDFKCYVSCLLDIMQVARKGKVNYEK----SLKQIDT-MLPDHMK 95
>AJ237706-1|CAB40347.1| 570|Anopheles gambiae putative
5'-nucleotidase protein.
Length = 570
Score = 23.0 bits (47), Expect = 9.1
Identities = 9/22 (40%), Positives = 14/22 (63%)
Frame = -3
Query: 93 SPEALIPIIEEIKKTHTDTIVA 28
SP+ L P + E++K T+VA
Sbjct: 132 SPKGLAPYLAELEKMKIPTVVA 153
>AF008575-1|AAB87764.1| 525|Anopheles gambiae chitinase protein.
Length = 525
Score = 23.0 bits (47), Expect = 9.1
Identities = 12/48 (25%), Positives = 20/48 (41%)
Frame = +2
Query: 5 HLLSRKMAATMVSVWVFLISSIIGINASGELSILHSPESLSFSGSSKT 148
+LL + + MV W +G+ G ++H SL G+ T
Sbjct: 361 YLLDQGLGGAMV--WSLETDDFLGVCGGGRYPLMHEIRSLVNGGTPST 406
Database: mosquito
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 563,979
Number of sequences in database: 2352
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 615,973
Number of Sequences: 2352
Number of extensions: 10821
Number of successful extensions: 27
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 27
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 27
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 70250040
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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