Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmmt24c17
         (730 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BC023000-1|AAH23000.1|  226|Homo sapiens transmembrane protein 8...    69   2e-11
AK126545-1|BAC86586.1|  140|Homo sapiens protein ( Homo sapiens ...    60   1e-08
BC035692-1|AAH35692.1|  240|Homo sapiens transmembrane protein 8...    56   2e-07
AK074600-1|BAC11084.1|  240|Homo sapiens protein ( Homo sapiens ...    56   2e-07
BC017073-1|AAH17073.2|  220|Homo sapiens TMEM86A protein protein.      46   1e-04

>BC023000-1|AAH23000.1|  226|Homo sapiens transmembrane protein 86B
           protein.
          Length = 226

 Score = 68.9 bits (161), Expect = 2e-11
 Identities = 45/187 (24%), Positives = 72/187 (38%), Gaps = 2/187 (1%)
 Frame = +2

Query: 170 PFFKCVCVYFLAMGAGGSDPSLIGVATKCAPIXXXXXXXXXHHGSLPYEKGWYXXXXXXX 349
           PF    CVYF  +       S      KC P+            S     G Y       
Sbjct: 27  PFILSCCVYF-CLWIPEDQLSWFAALVKCLPVLCLAGFLWVMSPS-----GGYTQLLQGA 80

Query: 350 XXXXXXXXXXXVWPQHFIXXXXXXXXXHISYISAFRFTPLAKPLAPIVYSGCGYYMTLIT 529
                      +WP  F+         H+ Y+ AF F+PL   L  ++    G Y++L+ 
Sbjct: 81  LVCSAVGDACLIWPAAFVPGMAAFATAHLLYVWAFGFSPLQPGLLLLIILAPGPYLSLVL 140

Query: 530 PPDGLKVLVPV--YGMLLSTMAWXXXXXXXXXXXXXXXFLISDAILGYSLFGGPVPYKQV 703
                 +++PV  YG++L  M W               F +SD +L +  F  P+P+ ++
Sbjct: 141 QHLEPDMVLPVAAYGLILMAMLWRGLAQGGSAGWGALLFTLSDGVLAWDTFAQPLPHARL 200

Query: 704 LVMSTYY 724
           ++M+TYY
Sbjct: 201 VIMTTYY 207


>AK126545-1|BAC86586.1|  140|Homo sapiens protein ( Homo sapiens
           cDNA FLJ44581 fis, clone ADRGL2010315. ).
          Length = 140

 Score = 59.7 bits (138), Expect = 1e-08
 Identities = 29/100 (29%), Positives = 51/100 (51%), Gaps = 2/100 (2%)
 Frame = +2

Query: 431 HISYISAFRFTPLAKPLAPIVYSGCGYYMTLITPPDGLKVLVPV--YGMLLSTMAWXXXX 604
           H+ Y+ AF F+PL   L  ++    G Y++L+       +++PV  YG++L  M W    
Sbjct: 22  HLLYVWAFGFSPLQPGLLLLIILAPGPYLSLVLQHLEPDMVLPVAAYGLILMAMLWRGLA 81

Query: 605 XXXXXXXXXXXFLISDAILGYSLFGGPVPYKQVLVMSTYY 724
                      F +SD +L +  F  P+P+  +++M+TYY
Sbjct: 82  QGGSAGWGALLFTLSDGVLAWDTFAQPLPHAHLVIMTTYY 121


>BC035692-1|AAH35692.1|  240|Homo sapiens transmembrane protein 86A
           protein.
          Length = 240

 Score = 55.6 bits (128), Expect = 2e-07
 Identities = 53/202 (26%), Positives = 71/202 (35%), Gaps = 16/202 (7%)
 Frame = +2

Query: 170 PFFKCVCVYFLAMGAGGSDPSLIGVATKCAPIXXXXXXXXXHH-GSLPYEKGWYXXXXXX 346
           PFFK  CVYF+ +    S PS +    KC PI         H  G L             
Sbjct: 17  PFFKATCVYFV-LWLPSSSPSWVSTLIKCLPIFCLWLFLLAHGLGFLLAHPS--ATRIFV 73

Query: 347 XXXXXXXXXXXXVWPQ--HFIXXXXXXXXXHISYISAFRFTPLAKPLAPIVYSGCGYYMT 520
                       +W    +F+         H+ Y SAF   PLA     ++ +  G    
Sbjct: 74  GLVFSAVGDAFLIWQDQGYFVHGLLMFAVTHMFYASAFGMQPLALRTGLVMAALSGLCYA 133

Query: 521 LITP--PDGLKVLVPVYGMLLSTMAWXXXXXXXXXXXXXXX-----------FLISDAIL 661
           L+ P        LV VY  L+  M W                          F+ISD  +
Sbjct: 134 LLYPCLSGAFTYLVGVYVALIGFMGWRAMAGLRLAGADWRWTELAAGSGALFFIISDLTI 193

Query: 662 GYSLFGGPVPYKQVLVMSTYYL 727
             + F  PVPY + L+MSTYY+
Sbjct: 194 ALNKFCFPVPYSRALIMSTYYV 215


>AK074600-1|BAC11084.1|  240|Homo sapiens protein ( Homo sapiens
           cDNA FLJ90119 fis, clone HEMBA1006960. ).
          Length = 240

 Score = 55.6 bits (128), Expect = 2e-07
 Identities = 53/202 (26%), Positives = 71/202 (35%), Gaps = 16/202 (7%)
 Frame = +2

Query: 170 PFFKCVCVYFLAMGAGGSDPSLIGVATKCAPIXXXXXXXXXHH-GSLPYEKGWYXXXXXX 346
           PFFK  CVYF+ +    S PS +    KC PI         H  G L             
Sbjct: 17  PFFKATCVYFV-LWLPSSSPSWVSTLIKCLPIFCLWLFLLAHGLGFLLAHPS--ATRIFV 73

Query: 347 XXXXXXXXXXXXVWPQ--HFIXXXXXXXXXHISYISAFRFTPLAKPLAPIVYSGCGYYMT 520
                       +W    +F+         H+ Y SAF   PLA     ++ +  G    
Sbjct: 74  GLVFSAVGDAFLIWQDQGYFVHGLLMFAVTHMFYASAFGMQPLALRTGLVMAALSGLCYA 133

Query: 521 LITP--PDGLKVLVPVYGMLLSTMAWXXXXXXXXXXXXXXX-----------FLISDAIL 661
           L+ P        LV VY  L+  M W                          F+ISD  +
Sbjct: 134 LLYPCLSGAFTYLVGVYVALIGFMGWRAMAGLRLAGADWRWTELAAGSGALFFIISDLTI 193

Query: 662 GYSLFGGPVPYKQVLVMSTYYL 727
             + F  PVPY + L+MSTYY+
Sbjct: 194 ALNKFCFPVPYSRALIMSTYYV 215


>BC017073-1|AAH17073.2|  220|Homo sapiens TMEM86A protein protein.
          Length = 220

 Score = 46.0 bits (104), Expect = 1e-04
 Identities = 49/196 (25%), Positives = 67/196 (34%), Gaps = 16/196 (8%)
 Frame = +2

Query: 188 CVYFLAMGAGGSDPSLIGVATKCAPIXXXXXXXXXHH-GSLPYEKGWYXXXXXXXXXXXX 364
           CVYF+ +    S PS +    KC PI         H  G L                   
Sbjct: 3   CVYFV-LWLPSSSPSWVSTLIKCLPIFCLWLFLLAHGLGFLLAHPS--ATRIFVGLVFSA 59

Query: 365 XXXXXXVWPQ--HFIXXXXXXXXXHISYISAFRFTPLAKPLAPIVYSGCGYYMTLITP-- 532
                 +W    +F+         H+ Y SAF   PLA     ++ +  G    L+ P  
Sbjct: 60  VGDAFLIWQDQGYFVHGLLMFAVTHMFYASAFGMQPLALRTGLVMAALSGLCYALLYPCL 119

Query: 533 PDGLKVLVPVYGMLLSTMAWXXXXXXXXXXXXXXX-----------FLISDAILGYSLFG 679
                 LV VY  L+  M W                          F+ISD  +  + F 
Sbjct: 120 SGAFTYLVGVYVALIGFMGWRAMAGLRLAGADWRWTELAAGSGALFFIISDLTIALNKFC 179

Query: 680 GPVPYKQVLVMSTYYL 727
            PVPY + L+MSTYY+
Sbjct: 180 FPVPYSRALIMSTYYV 195


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 114,606,157
Number of Sequences: 237096
Number of extensions: 2611678
Number of successful extensions: 5638
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 5342
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5634
length of database: 76,859,062
effective HSP length: 88
effective length of database: 55,994,614
effective search space used: 8623170556
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)