Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmmt24c17
         (730 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BT023909-1|ABA81843.1|  254|Drosophila melanogaster GH04784p pro...    35   0.13 
AE014297-4411|AAF56916.1|  254|Drosophila melanogaster CG7582-PA...    35   0.13 
AE014134-2436|AAN10860.1|  424|Drosophila melanogaster CG31765-P...    30   3.7  

>BT023909-1|ABA81843.1|  254|Drosophila melanogaster GH04784p
           protein.
          Length = 254

 Score = 34.7 bits (76), Expect = 0.13
 Identities = 34/128 (26%), Positives = 58/128 (45%), Gaps = 30/128 (23%)
 Frame = +2

Query: 431 HISYISAFRFTPLAKPLAPIVY---SGCGY--------YMTLITPP---------DGLKV 550
           H+ YISAF + P+   +  ++Y   S C +        Y+  + PP         D + +
Sbjct: 101 HVFYISAFGWKPIKWFIGLLLYVAVSLCKFTGHYIRIPYLEYLKPPVVYFVHTKLDEILI 160

Query: 551 L-VPVYGMLLSTMAW--------XXXXXXXXXXXXXXXFLISDAILGYSLF-GGPVPYKQ 700
           + VP+Y  L++TM W                       F+ISDA++  ++F G P+P  +
Sbjct: 161 IGVPIYCFLITTMLWRSLARAVDSRNFLAVFCAIGAILFVISDALIAVTMFVGVPLPCAR 220

Query: 701 VLVMSTYY 724
           + +M TYY
Sbjct: 221 LQIMITYY 228


>AE014297-4411|AAF56916.1|  254|Drosophila melanogaster CG7582-PA
           protein.
          Length = 254

 Score = 34.7 bits (76), Expect = 0.13
 Identities = 34/128 (26%), Positives = 58/128 (45%), Gaps = 30/128 (23%)
 Frame = +2

Query: 431 HISYISAFRFTPLAKPLAPIVY---SGCGY--------YMTLITPP---------DGLKV 550
           H+ YISAF + P+   +  ++Y   S C +        Y+  + PP         D + +
Sbjct: 101 HVFYISAFGWKPIKWFIGLLLYVAVSLCKFTGHYIRIPYLEYLKPPVVYFVHTKLDEILI 160

Query: 551 L-VPVYGMLLSTMAW--------XXXXXXXXXXXXXXXFLISDAILGYSLF-GGPVPYKQ 700
           + VP+Y  L++TM W                       F+ISDA++  ++F G P+P  +
Sbjct: 161 IGVPIYCFLITTMLWRSLARAVDSRNFLAVFCAIGAILFVISDALIAVTMFVGVPLPCAR 220

Query: 701 VLVMSTYY 724
           + +M TYY
Sbjct: 221 LQIMITYY 228


>AE014134-2436|AAN10860.1|  424|Drosophila melanogaster CG31765-PA
           protein.
          Length = 424

 Score = 29.9 bits (64), Expect = 3.7
 Identities = 16/65 (24%), Positives = 28/65 (43%)
 Frame = -2

Query: 195 YTQTHLKNGTRRPPTPTLFTNAVGEIISPSRRL*KLTAHDKPETRYYTRHYTKHMH*TPH 16
           Y      +  + PP       ++  ++SP  R   L +H   E RY+ +H+ +  H  P 
Sbjct: 298 YDSPSNNSSIKTPPYAYARKESLYSVVSPKSRKGSLDSHLYDEIRYHQQHHHQQHH--PR 355

Query: 15  STTHI 1
           S  H+
Sbjct: 356 SHQHV 360


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 34,655,687
Number of Sequences: 53049
Number of extensions: 758208
Number of successful extensions: 1991
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 1860
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1989
length of database: 24,988,368
effective HSP length: 83
effective length of database: 20,585,301
effective search space used: 3273062859
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)