Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmmt24b22
         (677 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF132553-1|AAD27852.1|  801|Drosophila melanogaster BcDNA.GM0288...   299   3e-81
AF047037-1|AAC27447.1|  801|Drosophila melanogaster transitional...   299   3e-81
AE013599-984|AAF58863.1|  801|Drosophila melanogaster CG2331-PA,...   299   3e-81
AF202034-1|AAF17568.1|  799|Drosophila melanogaster endoplasmic ...   285   5e-77
AE014298-1761|AAN09307.1|  618|Drosophila melanogaster CG32651-P...    31   1.4  
BT016123-1|AAV37008.1|  591|Drosophila melanogaster LD01328p pro...    29   4.4  
AY268068-1|AAQ56704.1|  591|Drosophila melanogaster UDP-GalNAc:p...    29   4.4  
AF493067-1|AAM62412.1|  591|Drosophila melanogaster UDP-N-acetyl...    29   4.4  
AE014298-2730|AAN09470.1|  591|Drosophila melanogaster CG6394-PB...    29   4.4  
AE014298-2729|AAF48851.1|  591|Drosophila melanogaster CG6394-PA...    29   4.4  
AY075335-1|AAL68201.1|  475|Drosophila melanogaster GH14278p pro...    29   7.7  
AE014134-3247|AAF53897.1|  475|Drosophila melanogaster CG2493-PA...    29   7.7  

>AF132553-1|AAD27852.1|  801|Drosophila melanogaster BcDNA.GM02885
           protein.
          Length = 801

 Score =  299 bits (733), Expect = 3e-81
 Identities = 140/189 (74%), Positives = 159/189 (84%)
 Frame = +2

Query: 110 MADNKSPDDLSTAILRRKDRPNRLIVEEAVSDDNSVVALSQAKMEQLQLFRGDTVLLKGK 289
           MAD+K  +DL+TAIL+RKDRPNRLIVEEA +DDNSVV+LSQAKM++LQLFRGDTV+LKGK
Sbjct: 1   MADSKG-EDLATAILKRKDRPNRLIVEEAQNDDNSVVSLSQAKMDELQLFRGDTVILKGK 59

Query: 290 RRKETVCIVLSDDNCPDEKIRMXXXXXXXXXXXXSDVVSIAPCPSVKYGKRVHILPIDDS 469
           RRKETVCIVLSDD CPDEKIRM            SDVVS+  CP VKYGKRV ILPID+S
Sbjct: 60  RRKETVCIVLSDDTCPDEKIRMNRVVRNNLCVHLSDVVSVQSCPDVKYGKRVRILPIDES 119

Query: 470 VEGLTGNLFEVYLKPYFMEAYRPIHRDDTFMVRGGMRAVEFKVVETDPSPFCIVAPDTVI 649
            EG+TGNLFE+YLKPYF+EAYRPIH  D F+VR  MR +EFKVV TDP P+CIVAP+TVI
Sbjct: 120 TEGVTGNLFEIYLKPYFLEAYRPIHMGDNFIVRAAMRPIEFKVVLTDPEPYCIVAPETVI 179

Query: 650 HCDGEPIKR 676
            CDG+PIKR
Sbjct: 180 FCDGDPIKR 188


>AF047037-1|AAC27447.1|  801|Drosophila melanogaster transitional
           endoplasmic reticulumATPase TER94 protein.
          Length = 801

 Score =  299 bits (733), Expect = 3e-81
 Identities = 140/189 (74%), Positives = 159/189 (84%)
 Frame = +2

Query: 110 MADNKSPDDLSTAILRRKDRPNRLIVEEAVSDDNSVVALSQAKMEQLQLFRGDTVLLKGK 289
           MAD+K  +DL+TAIL+RKDRPNRLIVEEA +DDNSVV+LSQAKM++LQLFRGDTV+LKGK
Sbjct: 1   MADSKG-EDLATAILKRKDRPNRLIVEEAQNDDNSVVSLSQAKMDELQLFRGDTVILKGK 59

Query: 290 RRKETVCIVLSDDNCPDEKIRMXXXXXXXXXXXXSDVVSIAPCPSVKYGKRVHILPIDDS 469
           RRKETVCIVLSDD CPDEKIRM            SDVVS+  CP VKYGKRV ILPID+S
Sbjct: 60  RRKETVCIVLSDDTCPDEKIRMNRVVRNNLCVHLSDVVSVQSCPDVKYGKRVRILPIDES 119

Query: 470 VEGLTGNLFEVYLKPYFMEAYRPIHRDDTFMVRGGMRAVEFKVVETDPSPFCIVAPDTVI 649
            EG+TGNLFE+YLKPYF+EAYRPIH  D F+VR  MR +EFKVV TDP P+CIVAP+TVI
Sbjct: 120 TEGVTGNLFEIYLKPYFLEAYRPIHMGDNFIVRAAMRPIEFKVVLTDPEPYCIVAPETVI 179

Query: 650 HCDGEPIKR 676
            CDG+PIKR
Sbjct: 180 FCDGDPIKR 188


>AE013599-984|AAF58863.1|  801|Drosophila melanogaster CG2331-PA,
           isoform A protein.
          Length = 801

 Score =  299 bits (733), Expect = 3e-81
 Identities = 140/189 (74%), Positives = 159/189 (84%)
 Frame = +2

Query: 110 MADNKSPDDLSTAILRRKDRPNRLIVEEAVSDDNSVVALSQAKMEQLQLFRGDTVLLKGK 289
           MAD+K  +DL+TAIL+RKDRPNRLIVEEA +DDNSVV+LSQAKM++LQLFRGDTV+LKGK
Sbjct: 1   MADSKG-EDLATAILKRKDRPNRLIVEEAQNDDNSVVSLSQAKMDELQLFRGDTVILKGK 59

Query: 290 RRKETVCIVLSDDNCPDEKIRMXXXXXXXXXXXXSDVVSIAPCPSVKYGKRVHILPIDDS 469
           RRKETVCIVLSDD CPDEKIRM            SDVVS+  CP VKYGKRV ILPID+S
Sbjct: 60  RRKETVCIVLSDDTCPDEKIRMNRVVRNNLCVHLSDVVSVQSCPDVKYGKRVRILPIDES 119

Query: 470 VEGLTGNLFEVYLKPYFMEAYRPIHRDDTFMVRGGMRAVEFKVVETDPSPFCIVAPDTVI 649
            EG+TGNLFE+YLKPYF+EAYRPIH  D F+VR  MR +EFKVV TDP P+CIVAP+TVI
Sbjct: 120 TEGVTGNLFEIYLKPYFLEAYRPIHMGDNFIVRAAMRPIEFKVVLTDPEPYCIVAPETVI 179

Query: 650 HCDGEPIKR 676
            CDG+PIKR
Sbjct: 180 FCDGDPIKR 188


>AF202034-1|AAF17568.1|  799|Drosophila melanogaster endoplasmic
           reticulum membranefusion protein protein.
          Length = 799

 Score =  285 bits (698), Expect = 5e-77
 Identities = 135/189 (71%), Positives = 153/189 (80%)
 Frame = +2

Query: 110 MADNKSPDDLSTAILRRKDRPNRLIVEEAVSDDNSVVALSQAKMEQLQLFRGDTVLLKGK 289
           MAD+K  +DL+TAIL+RKDRPNRLIVEEA +DDNSVV+LSQAKM++LQLFRGDTV+LKGK
Sbjct: 1   MADSKG-EDLATAILKRKDRPNRLIVEEAQNDDNSVVSLSQAKMDELQLFRGDTVILKGK 59

Query: 290 RRKETVCIVLSDDNCPDEKIRMXXXXXXXXXXXXSDVVSIAPCPSVKYGKRVHILPIDDS 469
           RRKETVCIVLSDD CPDEKIRM            SDVVS+  CP VKYGKRV ILPID+S
Sbjct: 60  RRKETVCIVLSDDTCPDEKIRMNRVVRNNLCVHLSDVVSVQSCPDVKYGKRVRILPIDES 119

Query: 470 VEGLTGNLFEVYLKPYFMEAYRPIHRDDTFMVRGGMRAVEFKVVETDPSPFCIVAPDTVI 649
            EG+TGNLFE+YLKPYF      IH  D F+VR  MR +EFKVV TDP P+CIVAP+TVI
Sbjct: 120 TEGVTGNLFEIYLKPYFPRGLSAIHMGDNFIVRAAMRPIEFKVVLTDPEPYCIVAPETVI 179

Query: 650 HCDGEPIKR 676
            CDG+PIKR
Sbjct: 180 FCDGDPIKR 188


>AE014298-1761|AAN09307.1|  618|Drosophila melanogaster CG32651-PA
           protein.
          Length = 618

 Score = 31.1 bits (67), Expect = 1.4
 Identities = 21/70 (30%), Positives = 32/70 (45%)
 Frame = +3

Query: 294 ARKPFASCSQTIIALMRKFG*TVL*ETTFVCVFLMWYPSLRVLQ*NMENESTYCQLMIQL 473
           A+ P  +C +++      F  T+      V    +  P    L  N+ NES  C  +IQL
Sbjct: 434 AKCPDQNCQESLFMYNISFHLTIKHNNWLVKHLELNTPYTFQLDLNVTNESVKCHAVIQL 493

Query: 474 RVLLAIYSKY 503
           + +L  YSKY
Sbjct: 494 QNVLLEYSKY 503


>BT016123-1|AAV37008.1|  591|Drosophila melanogaster LD01328p
           protein.
          Length = 591

 Score = 29.5 bits (63), Expect = 4.4
 Identities = 18/55 (32%), Positives = 25/55 (45%)
 Frame = -1

Query: 461 QLAVCGLVFHISLKDTERWIPHQKDAHEGCFSQHGSSEFSHQGNYRLRARCKRFP 297
           +LA+C LV    L     W  H K   E   ++ G  +F+HQ   RL  R +  P
Sbjct: 13  RLALCLLVLLPLLYLLANWSDHHKRVQEAYHTRFGGPKFAHQ---RLEGRPREVP 64


>AY268068-1|AAQ56704.1|  591|Drosophila melanogaster
           UDP-GalNAc:polypeptide N-acetylgalactosaminyltransferase
           protein.
          Length = 591

 Score = 29.5 bits (63), Expect = 4.4
 Identities = 18/55 (32%), Positives = 25/55 (45%)
 Frame = -1

Query: 461 QLAVCGLVFHISLKDTERWIPHQKDAHEGCFSQHGSSEFSHQGNYRLRARCKRFP 297
           +LA+C LV    L     W  H K   E   ++ G  +F+HQ   RL  R +  P
Sbjct: 13  RLALCLLVLLPLLYLLANWSDHHKRVQEAYHTRFGGPKFAHQ---RLEGRPREVP 64


>AF493067-1|AAM62412.1|  591|Drosophila melanogaster
           UDP-N-acetylgalactosamine:
           polypeptideN-acetylgalactosaminyltransferase 2 protein.
          Length = 591

 Score = 29.5 bits (63), Expect = 4.4
 Identities = 18/55 (32%), Positives = 25/55 (45%)
 Frame = -1

Query: 461 QLAVCGLVFHISLKDTERWIPHQKDAHEGCFSQHGSSEFSHQGNYRLRARCKRFP 297
           +LA+C LV    L     W  H K   E   ++ G  +F+HQ   RL  R +  P
Sbjct: 13  RLALCLLVLLPLLYLLANWSDHHKRVQEAYHTRFGGPKFAHQ---RLEGRPREVP 64


>AE014298-2730|AAN09470.1|  591|Drosophila melanogaster CG6394-PB,
           isoform B protein.
          Length = 591

 Score = 29.5 bits (63), Expect = 4.4
 Identities = 18/55 (32%), Positives = 25/55 (45%)
 Frame = -1

Query: 461 QLAVCGLVFHISLKDTERWIPHQKDAHEGCFSQHGSSEFSHQGNYRLRARCKRFP 297
           +LA+C LV    L     W  H K   E   ++ G  +F+HQ   RL  R +  P
Sbjct: 13  RLALCLLVLLPLLYLLANWSDHHKRVQEAYHTRFGGPKFAHQ---RLEGRPREVP 64


>AE014298-2729|AAF48851.1|  591|Drosophila melanogaster CG6394-PA,
           isoform A protein.
          Length = 591

 Score = 29.5 bits (63), Expect = 4.4
 Identities = 18/55 (32%), Positives = 25/55 (45%)
 Frame = -1

Query: 461 QLAVCGLVFHISLKDTERWIPHQKDAHEGCFSQHGSSEFSHQGNYRLRARCKRFP 297
           +LA+C LV    L     W  H K   E   ++ G  +F+HQ   RL  R +  P
Sbjct: 13  RLALCLLVLLPLLYLLANWSDHHKRVQEAYHTRFGGPKFAHQ---RLEGRPREVP 64


>AY075335-1|AAL68201.1|  475|Drosophila melanogaster GH14278p
           protein.
          Length = 475

 Score = 28.7 bits (61), Expect = 7.7
 Identities = 17/59 (28%), Positives = 26/59 (44%)
 Frame = +3

Query: 402 YPSLRVLQ*NMENESTYCQLMIQLRVLLAIYSKYT*SRTSWRLTVRSIVTTPSWSAGAC 578
           YP  +V     E  ST   L+  +   LA+Y+ YT S     ++V S      W+  +C
Sbjct: 293 YPVRQVCYYLKELHSTDADLLHAMSSALAVYTNYTQSAKCLDISVNSNADDSGWNIQSC 351


>AE014134-3247|AAF53897.1|  475|Drosophila melanogaster CG2493-PA
           protein.
          Length = 475

 Score = 28.7 bits (61), Expect = 7.7
 Identities = 17/59 (28%), Positives = 26/59 (44%)
 Frame = +3

Query: 402 YPSLRVLQ*NMENESTYCQLMIQLRVLLAIYSKYT*SRTSWRLTVRSIVTTPSWSAGAC 578
           YP  +V     E  ST   L+  +   LA+Y+ YT S     ++V S      W+  +C
Sbjct: 293 YPVRQVCYYLKELHSTDADLLHAMSSALAVYTNYTQSAKCLDISVNSNADDSGWNIQSC 351


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 31,624,107
Number of Sequences: 53049
Number of extensions: 667733
Number of successful extensions: 1778
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 1726
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1776
length of database: 24,988,368
effective HSP length: 82
effective length of database: 20,638,350
effective search space used: 2951284050
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)