Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmmt24b15
         (378 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF000632-1|AAC61894.1|  452|Apis mellifera major royal jelly pro...    22   2.1  
Z26319-1|CAA81228.1|  464|Apis mellifera royal jelly protein RJP...    21   6.4  
DQ435334-1|ABD92649.1|  135|Apis mellifera OBP17 protein.              21   6.4  
AY398690-1|AAR83734.1|  416|Apis mellifera major royal jelly pro...    21   6.4  
AY588474-1|AAT94401.1|  104|Apis mellifera defensin 2 protein.         20   8.4  

>AF000632-1|AAC61894.1|  452|Apis mellifera major royal jelly
           protein MRJP2 protein.
          Length = 452

 Score = 22.2 bits (45), Expect = 2.1
 Identities = 8/17 (47%), Positives = 11/17 (64%)
 Frame = -1

Query: 279 ESMHFIGQNKIFKNHYI 229
           E  HF+G NK  K+ Y+
Sbjct: 360 ELPHFVGSNKPVKDEYM 376


>Z26319-1|CAA81228.1|  464|Apis mellifera royal jelly protein
           RJP57-2 protein.
          Length = 464

 Score = 20.6 bits (41), Expect = 6.4
 Identities = 9/18 (50%), Positives = 10/18 (55%)
 Frame = -1

Query: 180 ASVKNATITLNYCFNWCY 127
           +S KN T TLN    W Y
Sbjct: 27  SSGKNLTNTLNVIHKWKY 44


>DQ435334-1|ABD92649.1|  135|Apis mellifera OBP17 protein.
          Length = 135

 Score = 20.6 bits (41), Expect = 6.4
 Identities = 9/14 (64%), Positives = 10/14 (71%)
 Frame = -1

Query: 369 CFFFEKLIHLILNS 328
           CFF  K I+ ILNS
Sbjct: 122 CFFKYKTINQILNS 135


>AY398690-1|AAR83734.1|  416|Apis mellifera major royal jelly
           protein 8 protein.
          Length = 416

 Score = 20.6 bits (41), Expect = 6.4
 Identities = 11/40 (27%), Positives = 17/40 (42%)
 Frame = -1

Query: 267 FIGQNKIFKNHYIKNHNLSIQRFQKRKRVASVKNATITLN 148
           +IG N+ F      N + S QR       +  +  T T+N
Sbjct: 202 YIGDNEGFALIIYNNSDNSFQRLTSSTFASDPRYTTFTIN 241


>AY588474-1|AAT94401.1|  104|Apis mellifera defensin 2 protein.
          Length = 104

 Score = 20.2 bits (40), Expect = 8.4
 Identities = 8/18 (44%), Positives = 12/18 (66%)
 Frame = +3

Query: 48  SVCSVRGVASARKLCSCQ 101
           S C++R +A  RK  SC+
Sbjct: 79  SACAIRCLAQRRKGGSCR 96


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 88,180
Number of Sequences: 438
Number of extensions: 1666
Number of successful extensions: 5
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5
length of database: 146,343
effective HSP length: 51
effective length of database: 124,005
effective search space used:  9176370
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.2 bits)