Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmmt24b05
(647 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPBC725.04 |||oxalyl-CoA decarboxylase |Schizosaccharomyces pomb... 190 1e-49
SPBP35G2.07 |ilv1||acetolactate synthase catalytic subunit|Schiz... 92 7e-20
SPAC1F8.07c |||pyruvate decarboxylase |Schizosaccharomyces pombe... 41 2e-04
SPAC1834.02 |aro1||pentafunctional aromatic polypeptide Aro1 |Sc... 28 1.0
SPCC584.15c |||arrestin/PY protein 2|Schizosaccharomyces pombe|c... 27 1.8
SPBC1773.05c |tms1||hexitol dehydrogenase |Schizosaccharomyces p... 27 2.3
SPAC6C3.06c |||P-type ATPase, calcium transporting|Schizosacchar... 27 2.3
SPCC330.05c |ura4||orotidine 5'-phosphate decarboxylase Ura4 |Sc... 26 5.4
SPAC227.15 |||protein phosphatase regulatory subunit Reg1 |Schiz... 25 7.1
SPAC1D4.05c |||Erd1 homolog|Schizosaccharomyces pombe|chr 1|||Ma... 25 7.1
SPBC1271.03c |||phosphoprotein phosphatase|Schizosaccharomyces p... 25 9.4
>SPBC725.04 |||oxalyl-CoA decarboxylase |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 574
Score = 190 bits (463), Expect = 1e-49
Identities = 92/200 (46%), Positives = 133/200 (66%), Gaps = 1/200 (0%)
Frame = +1
Query: 49 VEYVFGIVGIPVIETAMAFQSAGLKYIGMRNEQAACYAAQATGYLTGKPGVCLVVSGPGL 228
V+ VFGIVGIPVIE A Q++G++++G RNEQ+A YAA A GYLT +PGVC+VV GPG+
Sbjct: 18 VKVVFGIVGIPVIEICEAIQASGIRFVGFRNEQSAAYAATAYGYLTQRPGVCVVVGGPGV 77
Query: 229 LHCIGGMANAQVNCWPLVVIAGSCPEDHEAIGGFQEWPQVDSSRMYCKYAARPPSPRLIP 408
+H + G+ N++ N WPL+++AGS + G FQE QV + K A RPPSP+++
Sbjct: 78 VHAMAGVFNSKTNRWPLLLLAGSSETFQQNCGAFQELDQVSYLSPHTKLAVRPPSPKMVV 137
Query: 409 QHVEKAVRLALAGRPGVSYLDMPGTLLMAEVDE-GKVPLDYYSADTVKLAHPDPALVDQA 585
+ +A R+++ G PG Y+D+P + + VD+ K PL + + K A PDP + +A
Sbjct: 138 DSIRRAYRVSMTGTPGTCYVDLPANYIESTVDDFPKDPLPPIPS-SPKCA-PDPTQLQKA 195
Query: 586 AELLSKAERPLIIVGKGAAY 645
A L A+ PL++VGKGAAY
Sbjct: 196 AYYLKNAKAPLLVVGKGAAY 215
>SPBP35G2.07 |ilv1||acetolactate synthase catalytic
subunit|Schizosaccharomyces pombe|chr 2|||Manual
Length = 669
Score = 91.9 bits (218), Expect = 7e-20
Identities = 65/204 (31%), Positives = 105/204 (51%), Gaps = 8/204 (3%)
Frame = +1
Query: 49 VEYVFGIVGIPVIETAMA-FQSAGLKYIGMRNEQAACYAAQATGYLTGKPGVCLVVSGPG 225
V++VFG G ++ A ++S ++I R+EQAA +AAQA +T KPGV LV SGPG
Sbjct: 102 VKHVFGYPGGAILPVFDAIYRSPHFEFILPRHEQAAGHAAQAYSRVTKKPGVVLVTSGPG 161
Query: 226 LLHCIGGMANAQVNCWPLVVIAGSCPEDHEAIGGFQEWPQVDSSRMYCKYAARPPSPRLI 405
+ I +A+A + PLVV +G FQE V SR K+ +
Sbjct: 162 ATNVITPIADALADGTPLVVFSGQVATSAIGSDAFQEADMVGISRSCTKWNVMVKDVADL 221
Query: 406 PQHVEKAVRLALAGRPGVSYLDMPGTLLMAEVDE-----GKVP-LDYYSADTVKLAHPD- 564
P+ +++A +A +GRPG +D+P + + + E VP ++ + ++ +
Sbjct: 222 PRRIDEAFEIATSGRPGPVLVDLPKDVTASVLKEPIPILSSVPSMNRRMKEVLEEGSKNV 281
Query: 565 PALVDQAAELLSKAERPLIIVGKG 636
A +D+ A LL A++P+I G G
Sbjct: 282 TAKIDRVANLLKLAKKPVIFCGHG 305
>SPAC1F8.07c |||pyruvate decarboxylase |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 594
Score = 40.7 bits (91), Expect = 2e-04
Identities = 43/181 (23%), Positives = 75/181 (41%), Gaps = 9/181 (4%)
Frame = +1
Query: 115 GLKYIGMRNEQAACYAAQATGYLTGKPGVCLVVS-GPGLLHCIGGMANAQVNCWPLVVIA 291
GL IG NE +AA+ GY C VV+ G L G+ A P+++++
Sbjct: 47 GLSEIGCCNELNCAFAAE--GYARSNGIACAVVTYSVGALTAFDGIGGAYAENLPVILVS 104
Query: 292 GSCPED--------HEAIGGFQEWPQVDSSRMYCKYAARPPSPRLIPQHVEKAVRLALAG 447
GS + H +G Q++ ++ A P ++ A+R A+
Sbjct: 105 GSPNTNDLSSGHLLHHTLGTHDFEYQMEIAKKLTCAAVAIKRAEDAPVMIDHAIRQAILQ 164
Query: 448 RPGVSYLDMPGTLLMAEVDEGKVPLDYYSADTVKLAHPDPALVDQAAELLSKAERPLIIV 627
V Y+++P T + + P+ + + D AAEL+SK E+P+++
Sbjct: 165 HKPV-YIEIP-TNMANQPCPVPGPISAVISPEISDKESLEKATDIAAELISKKEKPILLA 222
Query: 628 G 630
G
Sbjct: 223 G 223
>SPAC1834.02 |aro1||pentafunctional aromatic polypeptide Aro1
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1573
Score = 28.3 bits (60), Expect = 1.0
Identities = 11/23 (47%), Positives = 15/23 (65%)
Frame = -1
Query: 101 AIAVSMTGIPTIPNTYSTPCGKY 33
+ V++T T NTY+ PCGKY
Sbjct: 610 SFGVNVTKSTTEENTYNIPCGKY 632
>SPCC584.15c |||arrestin/PY protein 2|Schizosaccharomyces pombe|chr
3|||Manual
Length = 594
Score = 27.5 bits (58), Expect = 1.8
Identities = 9/23 (39%), Positives = 15/23 (65%)
Frame = -3
Query: 75 PNYPKYIFNTLWKVLPSVSSNFQ 7
P+Y K++F+ LW +PS + Q
Sbjct: 350 PSYDKHVFDVLWDGIPSENPQLQ 372
>SPBC1773.05c |tms1||hexitol dehydrogenase |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 360
Score = 27.1 bits (57), Expect = 2.3
Identities = 10/28 (35%), Positives = 17/28 (60%)
Frame = +3
Query: 201 LFSGIRAGTTSLHRGNGQCSSKLLAIGC 284
LF + ++ RGN +C S++L +GC
Sbjct: 151 LFEPMSVAVHAMTRGNLKCGSRVLVMGC 178
>SPAC6C3.06c |||P-type ATPase, calcium
transporting|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1033
Score = 27.1 bits (57), Expect = 2.3
Identities = 10/25 (40%), Positives = 14/25 (56%)
Frame = +1
Query: 181 LTGKPGVCLVVSGPGLLHCIGGMAN 255
L KP CL++ G + CIG + N
Sbjct: 704 LRNKPDSCLIIDGESMEFCIGYLQN 728
>SPCC330.05c |ura4||orotidine 5'-phosphate decarboxylase Ura4
|Schizosaccharomyces pombe|chr 3|||Manual
Length = 264
Score = 25.8 bits (54), Expect = 5.4
Identities = 14/39 (35%), Positives = 18/39 (46%)
Frame = +1
Query: 178 YLTGKPGVCLVVSGPGLLHCIGGMANAQVNCWPLVVIAG 294
Y+T PG+ L V G GL VNC ++I G
Sbjct: 194 YITMSPGIGLDVKGDGLGQQYRTPEEVIVNCGSDIIIVG 232
>SPAC227.15 |||protein phosphatase regulatory subunit Reg1
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 873
Score = 25.4 bits (53), Expect = 7.1
Identities = 9/22 (40%), Positives = 12/22 (54%)
Frame = +2
Query: 491 WQKWTKAKYH*TTTAQTRLNWL 556
W+ W K K+ T + LNWL
Sbjct: 336 WRTWMKHKFKLKTISPETLNWL 357
>SPAC1D4.05c |||Erd1 homolog|Schizosaccharomyces pombe|chr
1|||Manual
Length = 387
Score = 25.4 bits (53), Expect = 7.1
Identities = 9/25 (36%), Positives = 15/25 (60%)
Frame = -3
Query: 381 GCILAVHATRIHLRPFLEATNSFMI 307
GC+L H ++ LRP L+ +F +
Sbjct: 197 GCVLQGHISKFTLRPDLKCDGTFFV 221
>SPBC1271.03c |||phosphoprotein phosphatase|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 244
Score = 25.0 bits (52), Expect = 9.4
Identities = 8/17 (47%), Positives = 12/17 (70%)
Frame = +3
Query: 72 WDTSH*NSNGFPISWSK 122
W+ H +S G P+SWS+
Sbjct: 130 WEKIHHDSTGKPVSWSQ 146
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,861,534
Number of Sequences: 5004
Number of extensions: 61273
Number of successful extensions: 143
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 136
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 142
length of database: 2,362,478
effective HSP length: 70
effective length of database: 2,012,198
effective search space used: 291768710
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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