Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmmt24b05
(647 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
01_05_0047 + 17557087-17558350,17558396-17558475,17559115-175591... 168 4e-42
04_03_0737 - 19152942-19154930 94 7e-20
04_03_0739 + 19180048-19182039 89 4e-18
02_03_0380 + 18335903-18337837 85 6e-17
03_02_0652 - 10188076-10188243,10188353-10188541,10188633-101887... 33 0.20
05_05_0170 + 22913791-22914315,22914418-22914581,22914675-229153... 32 0.45
01_01_0417 - 3135502-3135672,3135759-3135947,3136037-3136154,313... 31 0.60
02_04_0371 + 22434710-22435102,22435428-22435624,22435707-224358... 30 1.4
06_01_1001 + 7783072-7783493,7783530-7784212,7784582-7784592 29 4.2
01_03_0210 + 13825272-13825707,13825794-13826386 29 4.2
01_03_0123 - 12728636-12729246,12729336-12729738 29 4.2
06_03_1045 - 27111771-27112097,27112205-27112330,27112434-271126... 27 9.7
02_05_0477 - 29339649-29340253,29340880-29341492 27 9.7
>01_05_0047 +
17557087-17558350,17558396-17558475,17559115-17559149,
17559545-17559551,17560405-17560719
Length = 566
Score = 168 bits (408), Expect = 4e-42
Identities = 84/208 (40%), Positives = 130/208 (62%), Gaps = 8/208 (3%)
Frame = +1
Query: 46 GVEYVFGIVGIPVIETAMAFQSAGLKYIGMRNEQAACYAAQATGYLTGKPGVCLVVSGPG 225
G ++FG+VGIPV A +AG++++ RNEQ+A YAA A G+LTG PG+ L VSGPG
Sbjct: 17 GARHMFGVVGIPVTSLASRAAAAGVRFLAFRNEQSAGYAAAAYGFLTGSPGLLLTVSGPG 76
Query: 226 LLHCIGGMANAQVNCWPLVVIAGSCPEDHEAIGGFQEWPQVDSSRMYCKYAARPPSPRLI 405
+H + G+++A N WPL++++GSC + G FQE Q+ +++ + K A + + I
Sbjct: 77 CVHGLAGLSHATANAWPLLMVSGSCSQPDAGRGDFQELDQIAATKPFIKIAVKATTIADI 136
Query: 406 PQHVEKAVRLALAGRPGVSYLDMPGTLLMAEVDEGKVP--LDYYSADTVKLAHPDPAL-- 573
P+ V +A+ ++GRPG YLD+P +L + E + +D +AD+ K P
Sbjct: 137 PRLVFQALAATVSGRPGGCYLDIPSDVLHQTLTESEAAALIDAAAADSAKSDSSPPKHKS 196
Query: 574 ----VDQAAELLSKAERPLIIVGKGAAY 645
+++AAELL +AERPL++ GKGAAY
Sbjct: 197 LDEGIEKAAELLRRAERPLVVFGKGAAY 224
>04_03_0737 - 19152942-19154930
Length = 662
Score = 94.3 bits (224), Expect = 7e-20
Identities = 62/201 (30%), Positives = 95/201 (47%), Gaps = 2/201 (0%)
Frame = +1
Query: 46 GVEYVFGIVGIPVIETAMAF-QSAGLKYIGMRNEQAACYAAQATGYLTGKPGVCLVVSGP 222
GV VFG G +E A +S ++ +R+EQ +AA +G+PGVC+ SGP
Sbjct: 103 GVRDVFGYPGGASMEIHQALTRSPAIRNHLLRHEQGEAFAASGYARSSGRPGVCVATSGP 162
Query: 223 GLLHCIGGMANAQVNCWPLVVIAGSCPEDHEAIGGFQEWPQVDSSRMYCKYAARPPSPRL 402
G + + +A+A ++ PLV I G P FQE P V+ +R K+
Sbjct: 163 GATNLVSALADAHLDSVPLVAITGQVPRRMIGTDAFQETPIVELTRSITKHNYLVLDVDD 222
Query: 403 IPQHVEKAVRLALAGRPGVSYLDMPGTL-LMAEVDEGKVPLDYYSADTVKLAHPDPALVD 579
IP+ + +A LA GRPG +D+P + V P+ + P L+D
Sbjct: 223 IPRVINEAFFLATTGRPGPVLVDIPKDIQQQMAVPSWDAPMRLPGYISRLPKPPSANLLD 282
Query: 580 QAAELLSKAERPLIIVGKGAA 642
+ L+ AERP++ VG G +
Sbjct: 283 EVIRLVGDAERPVLYVGGGCS 303
>04_03_0739 + 19180048-19182039
Length = 663
Score = 88.6 bits (210), Expect = 4e-18
Identities = 61/201 (30%), Positives = 94/201 (46%), Gaps = 2/201 (0%)
Frame = +1
Query: 46 GVEYVFGIVGIPVIETAMAF-QSAGLKYIGMRNEQAACYAAQATGYLTGKPGVCLVVSGP 222
GV VF G +E A +S ++ +R+EQ +AA +G+PGVC+ SGP
Sbjct: 99 GVRDVFEYPGGASMEIHQALTRSPVIRNHLLRHEQGEAFAASGYARSSGRPGVCVATSGP 158
Query: 223 GLLHCIGGMANAQVNCWPLVVIAGSCPEDHEAIGGFQEWPQVDSSRMYCKYAARPPSPRL 402
G + + +A+A ++ PLV I G P FQE P V+ +R K+
Sbjct: 159 GATNLVSALADAHLDSVPLVAITGQAPRRMIGTDAFQETPIVEFTRSITKHNYLILDVDD 218
Query: 403 IPQHVEKAVRLALAGRPGVSYLDMPGTL-LMAEVDEGKVPLDYYSADTVKLAHPDPALVD 579
IP+ + +A LA GRPG +D+P + V P+ + P L+D
Sbjct: 219 IPRVINEAFFLASTGRPGPVLVDIPKDIQQQMAVPSWDAPMRLPGYISRLPKPPAANLLD 278
Query: 580 QAAELLSKAERPLIIVGKGAA 642
+ L+ AERP++ VG G +
Sbjct: 279 EVIRLVGDAERPVLYVGGGCS 299
>02_03_0380 + 18335903-18337837
Length = 644
Score = 84.6 bits (200), Expect = 6e-17
Identities = 60/203 (29%), Positives = 97/203 (47%), Gaps = 4/203 (1%)
Frame = +1
Query: 46 GVEYVFGIVGIPVIETAMAF-QSAGLKYIGMRNEQAACYAAQATGYLTGKPGVCLVVSGP 222
GV VF G +E A +S + R+EQ +AA +G+ GVC+ SGP
Sbjct: 85 GVSDVFAYPGGASMEIHQALTRSPVITNHLFRHEQGEAFAASGYARASGRVGVCVATSGP 144
Query: 223 GLLHCIGGMANAQVNCWPLVVIAGSCPEDHEAIGGFQEWPQVDSSRMYCKYAARPPSPRL 402
G + + +A+A ++ P+V I G P FQE P V+ +R K+
Sbjct: 145 GATNLVSALADALLDSVPMVAITGQVPRRMIGTDAFQETPIVEVTRSITKHNYLVLDVED 204
Query: 403 IPQHVEKAVRLALAGRPGVSYLDMPGTL---LMAEVDEGKVPLDYYSADTVKLAHPDPAL 573
IP+ +++A LA +GRPG +D+P + + V + + L Y A K P L
Sbjct: 205 IPRVIQEAFFLASSGRPGPVLVDIPKDIQQQMAVPVWDTSMNLPGYIARLPK--PPATEL 262
Query: 574 VDQAAELLSKAERPLIIVGKGAA 642
++Q L+ ++ RP++ VG G +
Sbjct: 263 LEQVLRLVGESRRPILYVGGGCS 285
>03_02_0652 -
10188076-10188243,10188353-10188541,10188633-10188750,
10188841-10189491,10189870-10190033,10190137-10190574
Length = 575
Score = 33.1 bits (72), Expect = 0.20
Identities = 27/86 (31%), Positives = 39/86 (45%), Gaps = 3/86 (3%)
Frame = +1
Query: 46 GVEYVFGIVG---IPVIETAMAFQSAGLKYIGMRNEQAACYAAQATGYLTGKPGVCLVVS 216
GV VF + G + +++ +A GL+ +G NE A YAA G G C V
Sbjct: 28 GVSDVFAVPGDFNLTLLDHLIA--EPGLRLVGCCNELNAGYAADGYARARGV-GACAVTF 84
Query: 217 GPGLLHCIGGMANAQVNCWPLVVIAG 294
G L + +A A P++ IAG
Sbjct: 85 TVGGLSVLNAIAGAYSENLPVICIAG 110
>05_05_0170 +
22913791-22914315,22914418-22914581,22914675-22915325,
22915425-22915542,22915635-22915823,22915948-22916118
Length = 605
Score = 31.9 bits (69), Expect = 0.45
Identities = 22/60 (36%), Positives = 26/60 (43%)
Frame = +1
Query: 115 GLKYIGMRNEQAACYAAQATGYLTGKPGVCLVVSGPGLLHCIGGMANAQVNCWPLVVIAG 294
GLK IG NE A YAA G G C V G L + +A A P++ I G
Sbjct: 81 GLKLIGCCNELNAGYAADGYARARG-VGACAVTFTVGGLSVLNAIAGAYSENLPVICIVG 139
>01_01_0417 -
3135502-3135672,3135759-3135947,3136037-3136154,
3136398-3137048,3137146-3137309,3138598-3139098
Length = 597
Score = 31.5 bits (68), Expect = 0.60
Identities = 23/79 (29%), Positives = 31/79 (39%), Gaps = 1/79 (1%)
Frame = +1
Query: 61 FGIVGIPVIETAMAFQSAGLKYIGMRNEQAACYAAQATGYLTGKP-GVCLVVSGPGLLHC 237
F + + +E G++ +G NE A YAA G G C V G L
Sbjct: 53 FNLTLLDELEAEAGAGHGGVRLVGCCNELNAAYAADGYARARGGGVGACAVTFTVGGLSA 112
Query: 238 IGGMANAQVNCWPLVVIAG 294
I +A A P+V I G
Sbjct: 113 INAVAGAFSENLPVVCIVG 131
>02_04_0371 +
22434710-22435102,22435428-22435624,22435707-22435824,
22436458-22436574,22436702-22436803,22437431-22437487,
22437976-22438044,22438423-22438533,22438597-22438791,
22439023-22439121,22439656-22440222,22440344-22440568,
22441036-22441338,22441640-22441707,22441947-22442105,
22442230-22442475,22442549-22442680,22443243-22443351,
22444131-22444283,22444359-22444601,22444695-22444862,
22445013-22445156,22445238-22445699,22446495-22446791,
22446867-22447024,22447139-22447246,22447474-22447732
Length = 1752
Score = 30.3 bits (65), Expect = 1.4
Identities = 18/90 (20%), Positives = 40/90 (44%)
Frame = +1
Query: 127 IGMRNEQAACYAAQATGYLTGKPGVCLVVSGPGLLHCIGGMANAQVNCWPLVVIAGSCPE 306
I +E++ + A G + KP + + SG + + + + A + PL+++ P
Sbjct: 414 ISCYDERSLGFHALGYGRGSRKPAIVITSSGTAVSNLLPSVVEASQDFVPLILLTADRPP 473
Query: 307 DHEAIGGFQEWPQVDSSRMYCKYAARPPSP 396
+ + +G Q QV+ + ++ P P
Sbjct: 474 ELQDVGANQAINQVNHFGSFVRHFFSLPPP 503
>06_01_1001 + 7783072-7783493,7783530-7784212,7784582-7784592
Length = 371
Score = 28.7 bits (61), Expect = 4.2
Identities = 29/117 (24%), Positives = 44/117 (37%), Gaps = 9/117 (7%)
Frame = +1
Query: 322 GGFQEWP-QVDSSRMYCKYAARPPSPRLIPQHV---EKAVRLALAGRPGVSYLDMPG--- 480
GG W DS + +PP L+ + E+ + L G + D G
Sbjct: 102 GGGDGWLIPCDSRHGRALFITQPPLQLLVLDPITGMERPLAAVLCAVDGCGHHDCHGRAY 161
Query: 481 --TLLMAEVDEGKVPLDYYSADTVKLAHPDPALVDQAAELLSKAERPLIIVGKGAAY 645
L+ +V G YS++T A DP +D +A RP ++VG Y
Sbjct: 162 RVALVGTDVAGGATHAAVYSSETY--AWSDPTSIDHHPNARVQARRPSVLVGNARLY 216
>01_03_0210 + 13825272-13825707,13825794-13826386
Length = 342
Score = 28.7 bits (61), Expect = 4.2
Identities = 18/52 (34%), Positives = 27/52 (51%)
Frame = +1
Query: 325 GFQEWPQVDSSRMYCKYAARPPSPRLIPQHVEKAVRLALAGRPGVSYLDMPG 480
GFQ +VD M +AAR R +P + E+ + A+A +P Y+D G
Sbjct: 214 GFQGKCRVDD--MLFNHAARIGGYRAVPPNDERQLATAVARQPVTVYIDASG 263
>01_03_0123 - 12728636-12729246,12729336-12729738
Length = 337
Score = 28.7 bits (61), Expect = 4.2
Identities = 25/83 (30%), Positives = 39/83 (46%), Gaps = 1/83 (1%)
Frame = +1
Query: 235 CIGGMANAQVNCWPLVVIAGSCPEDHE-AIGGFQEWPQVDSSRMYCKYAARPPSPRLIPQ 411
C GG +A + LVV G + E G++ +VD M +AAR R +P
Sbjct: 178 CGGGHTDA---AFQLVVDKGGITAESEYRYEGYKGRCRVDD--MLFNHAARVGGYRAVPP 232
Query: 412 HVEKAVRLALAGRPGVSYLDMPG 480
E+ + A+A +P +Y+D G
Sbjct: 233 ADERQLATAVARQPVTAYVDASG 255
>06_03_1045 -
27111771-27112097,27112205-27112330,27112434-27112673,
27113343-27113429,27113520-27113652,27113711-27113820,
27114308-27114424,27114526-27114610,27114693-27114796,
27115530-27115612,27115729-27115819
Length = 500
Score = 27.5 bits (58), Expect = 9.7
Identities = 14/36 (38%), Positives = 20/36 (55%)
Frame = +2
Query: 236 ASGEWPMLK*TVGHWLL*LARVLKIMKLLVASRNGL 343
A GE P+L GH + +AR+ K+ L V R G+
Sbjct: 426 AGGETPVLMSGAGHDAMAMARLTKVGMLFVRCRGGV 461
>02_05_0477 - 29339649-29340253,29340880-29341492
Length = 405
Score = 27.5 bits (58), Expect = 9.7
Identities = 13/29 (44%), Positives = 17/29 (58%)
Frame = -2
Query: 475 ACPNMILRDGRLMQVAQLSPRVGGSDGGR 389
AC + +G L+ A+ SP GGSDG R
Sbjct: 92 ACRALAAEEGPLLLRAEASPPGGGSDGTR 120
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 20,545,380
Number of Sequences: 37544
Number of extensions: 499494
Number of successful extensions: 1465
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 1411
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1460
length of database: 14,793,348
effective HSP length: 79
effective length of database: 11,827,372
effective search space used: 1608522592
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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