Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmmt24b05
         (647 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY058683-1|AAL13912.1|  568|Drosophila melanogaster LD40177p pro...   291   7e-79
AE013599-2972|AAF57501.1|  568|Drosophila melanogaster CG11208-P...   291   7e-79
BT023357-1|AAY55773.1|  175|Drosophila melanogaster IP01991p pro...    30   2.4  
AE014298-1290|AAF46454.1|  175|Drosophila melanogaster CG15367-P...    30   2.4  
AE014134-756|AAN10358.4| 23015|Drosophila melanogaster CG33196-P...    30   3.1  
AF218858-1|AAF31698.1|  175|Drosophila melanogaster Dorsal inter...    29   5.4  

>AY058683-1|AAL13912.1|  568|Drosophila melanogaster LD40177p
           protein.
          Length = 568

 Score =  291 bits (713), Expect = 7e-79
 Identities = 139/201 (69%), Positives = 160/201 (79%)
 Frame = +1

Query: 43  QGVEYVFGIVGIPVIETAMAFQSAGLKYIGMRNEQAACYAAQATGYLTGKPGVCLVVSGP 222
           QGVEYVFGI+GIPVIE +MAFQ+AGLKYIGMRNEQAACYAAQA GYLTGKPGVCLVVSGP
Sbjct: 17  QGVEYVFGIIGIPVIELSMAFQAAGLKYIGMRNEQAACYAAQAIGYLTGKPGVCLVVSGP 76

Query: 223 GLLHCIGGMANAQVNCWPLVVIAGSCPEDHEAIGGFQEWPQVDSSRMYCKYAARPPSPRL 402
           GLLH  GGMANAQVNCWPL+VI G+  +DHE IGGFQE PQV+ SR YCKYAARP +  L
Sbjct: 77  GLLHVTGGMANAQVNCWPLIVIGGATNQDHEGIGGFQECPQVELSRPYCKYAARPATAAL 136

Query: 403 IPQHVEKAVRLALAGRPGVSYLDMPGTLLMAEVDEGKVPLDYYSADTVKLAHPDPALVDQ 582
           IP HVEKAVR A  GRPGV+YLD PG +L ++  E  +     +     LA+P    V +
Sbjct: 137 IPLHVEKAVRYATYGRPGVAYLDFPGNILQSKAQEASI-YKALAHPAPPLAYPPHDDVIR 195

Query: 583 AAELLSKAERPLIIVGKGAAY 645
           AA+LL +A+RPL+IVGKG+AY
Sbjct: 196 AAKLLRQAKRPLVIVGKGSAY 216


>AE013599-2972|AAF57501.1|  568|Drosophila melanogaster CG11208-PA
           protein.
          Length = 568

 Score =  291 bits (713), Expect = 7e-79
 Identities = 139/201 (69%), Positives = 160/201 (79%)
 Frame = +1

Query: 43  QGVEYVFGIVGIPVIETAMAFQSAGLKYIGMRNEQAACYAAQATGYLTGKPGVCLVVSGP 222
           QGVEYVFGI+GIPVIE +MAFQ+AGLKYIGMRNEQAACYAAQA GYLTGKPGVCLVVSGP
Sbjct: 17  QGVEYVFGIIGIPVIELSMAFQAAGLKYIGMRNEQAACYAAQAIGYLTGKPGVCLVVSGP 76

Query: 223 GLLHCIGGMANAQVNCWPLVVIAGSCPEDHEAIGGFQEWPQVDSSRMYCKYAARPPSPRL 402
           GLLH  GGMANAQVNCWPL+VI G+  +DHE IGGFQE PQV+ SR YCKYAARP +  L
Sbjct: 77  GLLHVTGGMANAQVNCWPLIVIGGATNQDHEGIGGFQECPQVELSRPYCKYAARPATAAL 136

Query: 403 IPQHVEKAVRLALAGRPGVSYLDMPGTLLMAEVDEGKVPLDYYSADTVKLAHPDPALVDQ 582
           IP HVEKAVR A  GRPGV+YLD PG +L ++  E  +     +     LA+P    V +
Sbjct: 137 IPLHVEKAVRYATYGRPGVAYLDFPGNILQSKAQEASI-YKALAHPAPPLAYPPHDDVIR 195

Query: 583 AAELLSKAERPLIIVGKGAAY 645
           AA+LL +A+RPL+IVGKG+AY
Sbjct: 196 AAKLLRQAKRPLVIVGKGSAY 216


>BT023357-1|AAY55773.1|  175|Drosophila melanogaster IP01991p
           protein.
          Length = 175

 Score = 30.3 bits (65), Expect = 2.4
 Identities = 15/46 (32%), Positives = 22/46 (47%), Gaps = 2/46 (4%)
 Frame = +3

Query: 363 VLQVCSPAALPPSDPPT--RGESCATCISRPSRSIIFGHARYSVNG 494
           +L  C PA+LPP DP      + C  C+ + S +  F H     +G
Sbjct: 38  MLASCLPASLPPLDPEDDYPKQICRICVKKLSMAYEFSHQWLGAHG 83


>AE014298-1290|AAF46454.1|  175|Drosophila melanogaster CG15367-PA
           protein.
          Length = 175

 Score = 30.3 bits (65), Expect = 2.4
 Identities = 15/46 (32%), Positives = 22/46 (47%), Gaps = 2/46 (4%)
 Frame = +3

Query: 363 VLQVCSPAALPPSDPPT--RGESCATCISRPSRSIIFGHARYSVNG 494
           +L  C PA+LPP DP      + C  C+ + S +  F H     +G
Sbjct: 38  MLASCLPASLPPLDPEDDYPKQICRICVKKLSMAYEFSHQWLGAHG 83


>AE014134-756|AAN10358.4| 23015|Drosophila melanogaster CG33196-PB
            protein.
          Length = 23015

 Score = 29.9 bits (64), Expect = 3.1
 Identities = 15/45 (33%), Positives = 18/45 (40%)
 Frame = +1

Query: 187  GKPGVCLVVSGPGLLHCIGGMANAQVNCWPLVVIAGSCPEDHEAI 321
            G   +C  V+      C  GM  A  NC P  VI   CP +   I
Sbjct: 9850 GSNSICRNVNNRAECSCAPGMFGAPPNCRPECVINQDCPSNRACI 9894



 Score = 29.1 bits (62), Expect = 5.4
 Identities = 11/40 (27%), Positives = 19/40 (47%)
 Frame = +1

Query: 202   CLVVSGPGLLHCIGGMANAQVNCWPLVVIAGSCPEDHEAI 321
             CL  +   +  C+ G   A  +C P  V++  CP++   I
Sbjct: 11358 CLDTNSHAVCSCLEGYIGAPPSCKPECVVSSECPQNRACI 11397


>AF218858-1|AAF31698.1|  175|Drosophila melanogaster Dorsal
           interacting protein 1 protein.
          Length = 175

 Score = 29.1 bits (62), Expect = 5.4
 Identities = 15/46 (32%), Positives = 21/46 (45%), Gaps = 2/46 (4%)
 Frame = +3

Query: 363 VLQVCSPAALPPSDPPT--RGESCATCISRPSRSIIFGHARYSVNG 494
           +L  C PA+LPP DP      + C  C+   S +  F H     +G
Sbjct: 38  MLASCLPASLPPLDPEDDYPKQICRICVKXLSMAYEFSHQWLGAHG 83


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 32,796,420
Number of Sequences: 53049
Number of extensions: 779173
Number of successful extensions: 2517
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 2290
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2513
length of database: 24,988,368
effective HSP length: 82
effective length of database: 20,638,350
effective search space used: 2744900550
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)