BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmmt24a12
(741 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AB126079-1|BAD20206.1| 202|Homo sapiens keratin associated prot... 37 0.066
AY597812-1|AAT09005.1| 238|Homo sapiens UHS KerB-like protein. 35 0.35
AJ628246-1|CAF31638.1| 167|Homo sapiens keratin associated prot... 35 0.35
AB126072-1|BAD20199.1| 238|Homo sapiens keratin associated prot... 35 0.35
AY360461-1|AAQ62965.1| 187|Homo sapiens UHS KERB-like protein p... 34 0.47
AJ006692-1|CAA07188.1| 194|Homo sapiens ultra high sulfer kerat... 34 0.47
AB126077-1|BAD20204.1| 187|Homo sapiens keratin associated prot... 34 0.47
AB126076-1|BAD20203.1| 165|Homo sapiens keratin associated prot... 34 0.47
AK123603-1|BAC85658.1| 143|Homo sapiens protein ( Homo sapiens ... 33 1.1
U78313-1|AAB39748.1| 246|Homo sapiens myogenic repressor I-mf p... 33 1.4
BC007836-1|AAH07836.1| 246|Homo sapiens MyoD family inhibitor p... 33 1.4
AL035588-16|CAD92607.1| 185|Homo sapiens MyoD family inhibitor ... 33 1.4
AL035588-15|CAB54148.1| 246|Homo sapiens MyoD family inhibitor ... 33 1.4
AB126080-1|BAD20207.1| 156|Homo sapiens keratin associated prot... 33 1.4
AJ628247-1|CAF31639.1| 221|Homo sapiens keratin associated prot... 31 3.3
AB126074-1|BAD20201.1| 221|Homo sapiens keratin associated prot... 31 3.3
BC074982-1|AAH74982.1| 159|Homo sapiens keratin associated prot... 31 5.7
BC074981-1|AAH74981.1| 159|Homo sapiens keratin associated prot... 31 5.7
BC074919-1|AAH74919.1| 159|Homo sapiens keratin associated prot... 31 5.7
BC074918-1|AAH74918.1| 159|Homo sapiens keratin associated prot... 31 5.7
AJ406950-1|CAC27589.1| 159|Homo sapiens keratin associated prot... 31 5.7
AJ406947-1|CAC27586.1| 159|Homo sapiens keratin associated prot... 31 5.7
AB126070-1|BAD20197.1| 278|Homo sapiens keratin associated prot... 31 5.7
AJ628245-1|CAF31637.1| 177|Homo sapiens keratin associated prot... 30 7.6
AJ628243-1|CAF31636.1| 38|Homo sapiens keratin associated prot... 30 7.6
AF386649-1|AAL26987.1| 1362|Homo sapiens bromodomain-containing ... 30 7.6
AB126073-1|BAD20200.1| 288|Homo sapiens keratin associated prot... 30 7.6
AB126071-1|BAD20198.1| 177|Homo sapiens keratin associated prot... 30 7.6
>AB126079-1|BAD20206.1| 202|Homo sapiens keratin associated protein
protein.
Length = 202
Score = 37.1 bits (82), Expect = 0.066
Identities = 16/36 (44%), Positives = 20/36 (55%), Gaps = 2/36 (5%)
Frame = +3
Query: 36 CFSFDCGDC--DLCVNPCCLALSACCLIPCLCPNAC 137
C S CG C C NPCC S+CC +P C ++C
Sbjct: 149 CCSSGCGSCCQSSCCNPCC-CQSSCC-VPVCCQSSC 182
Score = 32.3 bits (70), Expect = 1.9
Identities = 16/42 (38%), Positives = 20/42 (47%), Gaps = 6/42 (14%)
Frame = +3
Query: 30 GLCFSFDCGDCDLCVNPCCLAL---SAC---CLIPCLCPNAC 137
G C S C C+ C PCC + S C C PC C ++C
Sbjct: 132 GGCGSCGCSQCNCC-KPCCCSSGCGSCCQSSCCNPCCCQSSC 172
Score = 30.3 bits (65), Expect = 7.6
Identities = 11/31 (35%), Positives = 14/31 (45%), Gaps = 1/31 (3%)
Frame = +3
Query: 51 CGDC-DLCVNPCCLALSACCLIPCLCPNACG 140
CG C C P C CC +P ++CG
Sbjct: 35 CGGCGSSCCVPVCCCKPVCCCVPACSCSSCG 65
>AY597812-1|AAT09005.1| 238|Homo sapiens UHS KerB-like protein.
Length = 238
Score = 34.7 bits (76), Expect = 0.35
Identities = 17/38 (44%), Positives = 20/38 (52%), Gaps = 3/38 (7%)
Frame = +3
Query: 36 CFSFDCGD--CDL-CVNPCCLALSACCLIPCLCPNACG 140
C S CG C C PCC + S+CC PC C + CG
Sbjct: 175 CCSSGCGSSCCQSSCCKPCC-SQSSCCK-PCCCSSGCG 210
Score = 32.3 bits (70), Expect = 1.9
Identities = 12/24 (50%), Positives = 15/24 (62%)
Frame = +3
Query: 69 CVNPCCLALSACCLIPCLCPNACG 140
C PCC + S+CC PC C + CG
Sbjct: 160 CCKPCC-SQSSCCK-PCCCSSGCG 181
>AJ628246-1|CAF31638.1| 167|Homo sapiens keratin associated protein
5-9 protein.
Length = 167
Score = 34.7 bits (76), Expect = 0.35
Identities = 17/38 (44%), Positives = 20/38 (52%), Gaps = 3/38 (7%)
Frame = +3
Query: 36 CFSFDCGD--CDL-CVNPCCLALSACCLIPCLCPNACG 140
C S CG C C PCC + S+CC PC C + CG
Sbjct: 104 CCSSGCGSSCCQSSCCKPCC-SQSSCCK-PCCCSSGCG 139
Score = 32.3 bits (70), Expect = 1.9
Identities = 12/24 (50%), Positives = 15/24 (62%)
Frame = +3
Query: 69 CVNPCCLALSACCLIPCLCPNACG 140
C PCC + S+CC PC C + CG
Sbjct: 89 CCKPCC-SQSSCCK-PCCCSSGCG 110
>AB126072-1|BAD20199.1| 238|Homo sapiens keratin associated protein
protein.
Length = 238
Score = 34.7 bits (76), Expect = 0.35
Identities = 17/38 (44%), Positives = 20/38 (52%), Gaps = 3/38 (7%)
Frame = +3
Query: 36 CFSFDCGD--CDL-CVNPCCLALSACCLIPCLCPNACG 140
C S CG C C PCC + S+CC PC C + CG
Sbjct: 175 CCSSGCGSSCCQSSCCKPCC-SQSSCCK-PCCCSSGCG 210
Score = 32.3 bits (70), Expect = 1.9
Identities = 12/24 (50%), Positives = 15/24 (62%)
Frame = +3
Query: 69 CVNPCCLALSACCLIPCLCPNACG 140
C PCC + S+CC PC C + CG
Sbjct: 160 CCKPCC-SQSSCCK-PCCCSSGCG 181
>AY360461-1|AAQ62965.1| 187|Homo sapiens UHS KERB-like protein
protein.
Length = 187
Score = 34.3 bits (75), Expect = 0.47
Identities = 17/38 (44%), Positives = 20/38 (52%), Gaps = 3/38 (7%)
Frame = +3
Query: 36 CFSFDCGD--CDL-CVNPCCLALSACCLIPCLCPNACG 140
C S CG C C PCC + S+CC PC C + CG
Sbjct: 95 CCSSGCGSSCCQSSCCKPCC-SQSSCCK-PCSCSSGCG 130
Score = 32.3 bits (70), Expect = 1.9
Identities = 12/24 (50%), Positives = 15/24 (62%)
Frame = +3
Query: 69 CVNPCCLALSACCLIPCLCPNACG 140
C PCC + S+CC PC C + CG
Sbjct: 138 CCKPCC-SQSSCCK-PCCCSSGCG 159
>AJ006692-1|CAA07188.1| 194|Homo sapiens ultra high sulfer keratin
protein.
Length = 194
Score = 34.3 bits (75), Expect = 0.47
Identities = 17/38 (44%), Positives = 20/38 (52%), Gaps = 3/38 (7%)
Frame = +3
Query: 36 CFSFDCGD--CDL-CVNPCCLALSACCLIPCLCPNACG 140
C S CG C C PCC + S+CC PC C + CG
Sbjct: 102 CCSSGCGSSCCQSSCCKPCC-SQSSCCK-PCSCSSGCG 137
Score = 32.3 bits (70), Expect = 1.9
Identities = 12/24 (50%), Positives = 15/24 (62%)
Frame = +3
Query: 69 CVNPCCLALSACCLIPCLCPNACG 140
C PCC + S+CC PC C + CG
Sbjct: 145 CCKPCC-SQSSCCK-PCCCSSGCG 166
>AB126077-1|BAD20204.1| 187|Homo sapiens keratin associated protein
protein.
Length = 187
Score = 34.3 bits (75), Expect = 0.47
Identities = 17/38 (44%), Positives = 20/38 (52%), Gaps = 3/38 (7%)
Frame = +3
Query: 36 CFSFDCGD--CDL-CVNPCCLALSACCLIPCLCPNACG 140
C S CG C C PCC + S+CC PC C + CG
Sbjct: 95 CCSSGCGSSCCQSSCCKPCC-SQSSCCK-PCSCSSGCG 130
Score = 32.3 bits (70), Expect = 1.9
Identities = 12/24 (50%), Positives = 15/24 (62%)
Frame = +3
Query: 69 CVNPCCLALSACCLIPCLCPNACG 140
C PCC + S+CC PC C + CG
Sbjct: 138 CCKPCC-SQSSCCK-PCCCSSGCG 159
Score = 30.3 bits (65), Expect = 7.6
Identities = 11/31 (35%), Positives = 14/31 (45%), Gaps = 1/31 (3%)
Frame = +3
Query: 51 CGDC-DLCVNPCCLALSACCLIPCLCPNACG 140
CG C C P C CC +P ++CG
Sbjct: 21 CGGCGSSCCVPICCCKPVCCCVPACSCSSCG 51
>AB126076-1|BAD20203.1| 165|Homo sapiens keratin associated protein
protein.
Length = 165
Score = 34.3 bits (75), Expect = 0.47
Identities = 17/38 (44%), Positives = 19/38 (50%), Gaps = 3/38 (7%)
Frame = +3
Query: 36 CFSFDCGD--CDL-CVNPCCLALSACCLIPCLCPNACG 140
C S CG C C PCC S+CC PC C + CG
Sbjct: 102 CCSSGCGSSCCQSSCCKPCCCQ-SSCCK-PCCCSSGCG 137
Score = 30.3 bits (65), Expect = 7.6
Identities = 11/31 (35%), Positives = 14/31 (45%), Gaps = 1/31 (3%)
Frame = +3
Query: 51 CGDC-DLCVNPCCLALSACCLIPCLCPNACG 140
CG C C P C CC +P ++CG
Sbjct: 28 CGGCGSSCCVPVCCCKPVCCCVPACSCSSCG 58
Score = 30.3 bits (65), Expect = 7.6
Identities = 14/33 (42%), Positives = 15/33 (45%), Gaps = 3/33 (9%)
Frame = +3
Query: 36 CFSFDCGD--CDL-CVNPCCLALSACCLIPCLC 125
C S CG C C NPCC S C + C C
Sbjct: 131 CCSSGCGSSCCQSSCCNPCCSQSSCCVPVCCQC 163
>AK123603-1|BAC85658.1| 143|Homo sapiens protein ( Homo sapiens
cDNA FLJ41609 fis, clone CTONG3001560. ).
Length = 143
Score = 33.1 bits (72), Expect = 1.1
Identities = 11/27 (40%), Positives = 18/27 (66%), Gaps = 1/27 (3%)
Frame = +3
Query: 60 CDLCVNPCCLALSAC-CLIPCLCPNAC 137
C +CV C + + AC C++PC+C + C
Sbjct: 112 CFVCVCMCVVTMCACACVLPCVCVHLC 138
>U78313-1|AAB39748.1| 246|Homo sapiens myogenic repressor I-mf
protein.
Length = 246
Score = 32.7 bits (71), Expect = 1.4
Identities = 17/38 (44%), Positives = 19/38 (50%), Gaps = 3/38 (7%)
Frame = +3
Query: 36 CFSFDCGDCDLCVNPCCLALSACC-LIPCL--CPNACG 140
C S +C DCDL + C L ACC CL C CG
Sbjct: 204 CGSGECADCDLPCDLDCGILDACCESADCLEICMECCG 241
>BC007836-1|AAH07836.1| 246|Homo sapiens MyoD family inhibitor
protein.
Length = 246
Score = 32.7 bits (71), Expect = 1.4
Identities = 17/38 (44%), Positives = 19/38 (50%), Gaps = 3/38 (7%)
Frame = +3
Query: 36 CFSFDCGDCDLCVNPCCLALSACC-LIPCL--CPNACG 140
C S +C DCDL + C L ACC CL C CG
Sbjct: 204 CGSGECADCDLPCDLDCGILDACCESADCLEICMECCG 241
>AL035588-16|CAD92607.1| 185|Homo sapiens MyoD family inhibitor
protein.
Length = 185
Score = 32.7 bits (71), Expect = 1.4
Identities = 17/38 (44%), Positives = 19/38 (50%), Gaps = 3/38 (7%)
Frame = +3
Query: 36 CFSFDCGDCDLCVNPCCLALSACC-LIPCL--CPNACG 140
C S +C DCDL + C L ACC CL C CG
Sbjct: 143 CGSGECADCDLPCDLDCGILDACCESADCLEICMECCG 180
>AL035588-15|CAB54148.1| 246|Homo sapiens MyoD family inhibitor
protein.
Length = 246
Score = 32.7 bits (71), Expect = 1.4
Identities = 17/38 (44%), Positives = 19/38 (50%), Gaps = 3/38 (7%)
Frame = +3
Query: 36 CFSFDCGDCDLCVNPCCLALSACC-LIPCL--CPNACG 140
C S +C DCDL + C L ACC CL C CG
Sbjct: 204 CGSGECADCDLPCDLDCGILDACCESADCLEICMECCG 241
>AB126080-1|BAD20207.1| 156|Homo sapiens keratin associated protein
protein.
Length = 156
Score = 32.7 bits (71), Expect = 1.4
Identities = 15/37 (40%), Positives = 17/37 (45%), Gaps = 3/37 (8%)
Frame = +3
Query: 36 CFSFDCGDCDLCVNPCCLALSAC---CLIPCLCPNAC 137
C SF C C PCC S C C PC C ++C
Sbjct: 97 CGSFCCQSS--CSKPCCCQSSCCQSSCCKPCCCQSSC 131
Score = 31.1 bits (67), Expect = 4.3
Identities = 11/26 (42%), Positives = 13/26 (50%), Gaps = 3/26 (11%)
Frame = +3
Query: 69 CVNPCCLALSAC---CLIPCLCPNAC 137
C PCC S C C PC C ++C
Sbjct: 121 CCKPCCCQSSCCQSSCFKPCCCQSSC 146
Score = 30.3 bits (65), Expect = 7.6
Identities = 11/31 (35%), Positives = 14/31 (45%), Gaps = 1/31 (3%)
Frame = +3
Query: 51 CGDC-DLCVNPCCLALSACCLIPCLCPNACG 140
CG C C P C CC +P ++CG
Sbjct: 28 CGGCGSSCCVPICCCKPVCCCVPACSCSSCG 58
>AJ628247-1|CAF31639.1| 221|Homo sapiens keratin associated protein
5-11 protein.
Length = 221
Score = 31.5 bits (68), Expect = 3.3
Identities = 12/29 (41%), Positives = 15/29 (51%)
Frame = +3
Query: 51 CGDCDLCVNPCCLALSACCLIPCLCPNAC 137
CG C C + CC+ + CC C C AC
Sbjct: 56 CGGCGGCGSGCCVPV-CCCKPMCCCVPAC 83
>AB126074-1|BAD20201.1| 221|Homo sapiens keratin associated protein
protein.
Length = 221
Score = 31.5 bits (68), Expect = 3.3
Identities = 12/29 (41%), Positives = 15/29 (51%)
Frame = +3
Query: 51 CGDCDLCVNPCCLALSACCLIPCLCPNAC 137
CG C C + CC+ + CC C C AC
Sbjct: 56 CGGCGGCGSGCCVPV-CCCKPMCCCVPAC 83
>BC074982-1|AAH74982.1| 159|Homo sapiens keratin associated protein
9-8 protein.
Length = 159
Score = 30.7 bits (66), Expect = 5.7
Identities = 11/25 (44%), Positives = 13/25 (52%)
Frame = +3
Query: 66 LCVNPCCLALSACCLIPCLCPNACG 140
+CV CC +CC PC P CG
Sbjct: 60 ICVTSCCQP--SCCSTPCCQPTCCG 82
>BC074981-1|AAH74981.1| 159|Homo sapiens keratin associated protein
9-8 protein.
Length = 159
Score = 30.7 bits (66), Expect = 5.7
Identities = 11/25 (44%), Positives = 13/25 (52%)
Frame = +3
Query: 66 LCVNPCCLALSACCLIPCLCPNACG 140
+CV CC +CC PC P CG
Sbjct: 60 ICVTSCCQP--SCCSTPCCQPTCCG 82
>BC074919-1|AAH74919.1| 159|Homo sapiens keratin associated protein
9-3 protein.
Length = 159
Score = 30.7 bits (66), Expect = 5.7
Identities = 11/25 (44%), Positives = 13/25 (52%)
Frame = +3
Query: 66 LCVNPCCLALSACCLIPCLCPNACG 140
+CV CC +CC PC P CG
Sbjct: 65 ICVTSCCQP--SCCSTPCCQPTCCG 87
>BC074918-1|AAH74918.1| 159|Homo sapiens keratin associated protein
9-3 protein.
Length = 159
Score = 30.7 bits (66), Expect = 5.7
Identities = 11/25 (44%), Positives = 13/25 (52%)
Frame = +3
Query: 66 LCVNPCCLALSACCLIPCLCPNACG 140
+CV CC +CC PC P CG
Sbjct: 65 ICVTSCCQP--SCCSTPCCQPTCCG 87
>AJ406950-1|CAC27589.1| 159|Homo sapiens keratin associated protein
9.8 protein.
Length = 159
Score = 30.7 bits (66), Expect = 5.7
Identities = 11/25 (44%), Positives = 13/25 (52%)
Frame = +3
Query: 66 LCVNPCCLALSACCLIPCLCPNACG 140
+CV CC +CC PC P CG
Sbjct: 60 ICVTSCCQP--SCCSTPCCQPTCCG 82
>AJ406947-1|CAC27586.1| 159|Homo sapiens keratin associated protein
9.3 protein.
Length = 159
Score = 30.7 bits (66), Expect = 5.7
Identities = 11/25 (44%), Positives = 13/25 (52%)
Frame = +3
Query: 66 LCVNPCCLALSACCLIPCLCPNACG 140
+CV CC +CC PC P CG
Sbjct: 65 ICVTSCCQP--SCCSTPCCQPTCCG 87
>AB126070-1|BAD20197.1| 278|Homo sapiens keratin associated protein
protein.
Length = 278
Score = 30.7 bits (66), Expect = 5.7
Identities = 13/36 (36%), Positives = 15/36 (41%), Gaps = 1/36 (2%)
Frame = +3
Query: 36 CFSFDCGDCDLCVNPCCLALSAC-CLIPCLCPNACG 140
C CG C C + S C C PC C + CG
Sbjct: 215 CSCSSCGSCAGSKGGCGSSCSQCSCCKPCCCSSGCG 250
>AJ628245-1|CAF31637.1| 177|Homo sapiens keratin associated protein
5-8 protein.
Length = 177
Score = 30.3 bits (65), Expect = 7.6
Identities = 15/37 (40%), Positives = 19/37 (51%), Gaps = 3/37 (8%)
Frame = +3
Query: 36 CFSFDCGD--CDL-CVNPCCLALSACCLIPCLCPNAC 137
C S CG C C PCC S+CC +P C ++C
Sbjct: 123 CCSSGCGSSCCQSSCCKPCC-CQSSCC-VPVCCQSSC 157
>AJ628243-1|CAF31636.1| 38|Homo sapiens keratin associated protein
5-3 protein.
Length = 38
Score = 30.3 bits (65), Expect = 7.6
Identities = 14/33 (42%), Positives = 15/33 (45%), Gaps = 3/33 (9%)
Frame = +3
Query: 36 CFSFDCGD--CDL-CVNPCCLALSACCLIPCLC 125
C S CG C C NPCC S C + C C
Sbjct: 4 CCSSGCGSSCCQSSCCNPCCSQSSCCVPVCCQC 36
>AF386649-1|AAL26987.1| 1362|Homo sapiens bromodomain-containing 4
protein.
Length = 1362
Score = 30.3 bits (65), Expect = 7.6
Identities = 12/21 (57%), Positives = 13/21 (61%), Gaps = 1/21 (4%)
Frame = +3
Query: 450 HHHHPSPNQ-PAVIINQPPPP 509
HHHH Q PA + QPPPP
Sbjct: 740 HHHHQQMQQAPAPVPQQPPPP 760
>AB126073-1|BAD20200.1| 288|Homo sapiens keratin associated protein
protein.
Length = 288
Score = 30.3 bits (65), Expect = 7.6
Identities = 11/31 (35%), Positives = 14/31 (45%), Gaps = 1/31 (3%)
Frame = +3
Query: 51 CGDC-DLCVNPCCLALSACCLIPCLCPNACG 140
CG C C P C CC +P ++CG
Sbjct: 42 CGGCGSSCCVPICCCKPVCCCVPACSCSSCG 72
Score = 30.3 bits (65), Expect = 7.6
Identities = 14/33 (42%), Positives = 15/33 (45%), Gaps = 3/33 (9%)
Frame = +3
Query: 36 CFSFDCGD--CDL-CVNPCCLALSACCLIPCLC 125
C S CG C C NPCC S C + C C
Sbjct: 254 CSSSGCGSSCCQSSCCNPCCSQSSCCVPVCCQC 286
>AB126071-1|BAD20198.1| 177|Homo sapiens keratin associated protein
protein.
Length = 177
Score = 30.3 bits (65), Expect = 7.6
Identities = 15/37 (40%), Positives = 19/37 (51%), Gaps = 3/37 (8%)
Frame = +3
Query: 36 CFSFDCGD--CDL-CVNPCCLALSACCLIPCLCPNAC 137
C S CG C C PCC S+CC +P C ++C
Sbjct: 123 CCSSGCGSSCCQSSCCKPCC-CQSSCC-VPVCCQSSC 157
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 101,792,641
Number of Sequences: 237096
Number of extensions: 2090479
Number of successful extensions: 5637
Number of sequences better than 10.0: 28
Number of HSP's better than 10.0 without gapping: 4910
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5523
length of database: 76,859,062
effective HSP length: 88
effective length of database: 55,994,614
effective search space used: 8847149012
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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