Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmmt24a03
(705 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
05_01_0588 + 5278013-5278153,5278641-5278782,5278923-5279019,527... 252 3e-67
06_01_0285 - 2090427-2090558,2091045-2091119,2091334-2091407,209... 101 6e-22
02_05_0884 - 32483735-32483866,32484417-32484491,32484707-324847... 100 1e-21
05_05_0306 - 23977543-23977614,23977709-23977799,23978296-239783... 65 4e-11
11_06_0394 - 23084485-23084577,23084677-23084802,23085134-230852... 56 2e-08
01_06_1091 + 34464923-34465026,34465124-34465163,34465245-344653... 54 1e-07
03_03_0187 + 15253000-15253207,15253281-15253370,15254338-152544... 45 5e-05
02_05_0057 + 25472872-25472912,25473012-25473157,25474008-254740... 45 7e-05
03_05_0782 - 27658855-27659211,27660417-27660540,27660714-27660871 44 1e-04
09_04_0728 - 19771975-19772093,19772131-19772224,19772322-197725... 43 3e-04
09_06_0102 + 20870346-20870518,20870599-20871013,20872180-20872341 36 0.031
08_02_1495 + 27526008-27526390,27526462-27526876,27529162-27529323 34 0.096
02_01_0268 + 1784781-1785056,1787314-1787394,1787395-1787856 31 0.89
09_02_0479 - 9753161-9753171,9755260-9755547,9755883-9756222 28 8.3
03_04_0176 - 18123895-18123996,18124169-18124289,18124381-18124430 28 8.3
>05_01_0588 +
5278013-5278153,5278641-5278782,5278923-5279019,
5279130-5279199,5279284-5279388,5279531-5279629,
5280062-5280152,5280238-5280311
Length = 272
Score = 252 bits (616), Expect = 3e-67
Identities = 115/180 (63%), Positives = 139/180 (77%)
Frame = +1
Query: 166 PVPGFSFENFQRNAFLAQKGFPAPKATKTGTTIVGIIYADGVILGADTRATENTVVSDKN 345
P GFS++N RNA L +KG P KTGTTIVG+++ DGV+LGADTRATE +V+DKN
Sbjct: 9 PKGGFSYDNCARNAMLVEKGLKMPGFLKTGTTIVGLVFQDGVVLGADTRATEGPIVADKN 68
Query: 346 CQKIHYLASNMYCCGAGTAADTEMTTQSVASQLELQRLHTGRTVPVETAATLLKRMLFRY 525
C+KIHY+A N+YCCGAGTAADTE T V+SQL+L R TGR V T+ TLLK LF Y
Sbjct: 69 CEKIHYMAPNIYCCGAGTAADTEAVTDMVSSQLQLHRYATGRESRVVTSLTLLKSHLFSY 128
Query: 526 QGHIGAALVLGGVDRTGPHIYCIYPHGSVDKLPYATMGSGSLAAMAVFEAGWKRDMNEEE 705
QGH+ AALVLGGVD TGPH++ +YPHGS D LP+ATMGSGSLAAM+VFE+ +K + EE
Sbjct: 129 QGHVSAALVLGGVDVTGPHLHTVYPHGSTDTLPFATMGSGSLAAMSVFESKYKEGLTREE 188
>06_01_0285 -
2090427-2090558,2091045-2091119,2091334-2091407,
2091792-2091903,2092036-2092108,2092291-2092346,
2092679-2092755,2093384-2093525
Length = 246
Score = 101 bits (242), Expect = 6e-22
Identities = 51/160 (31%), Positives = 90/160 (56%), Gaps = 1/160 (0%)
Frame = +1
Query: 229 PAPKATKTGTTIVGIIYADGVILGADTRATENTVVSDKNCQKIHYLASNMYCCGAGTAAD 408
P + GTTIVG+ Y GV+L AD+R + V+++ KI L N+Y C +G+AAD
Sbjct: 17 PTSGEHRMGTTIVGVCYDGGVVLAADSRTSTGMYVANRASDKITQLTDNVYVCRSGSAAD 76
Query: 409 TEMTTQSVASQLELQRLHTGRTVPVETAATLLKRMLFRYQGHIGAALVLGGVDR-TGPHI 585
T++ ++ V L + G+ V+ AA L++ + ++ + + A +++GG D+ G I
Sbjct: 77 TQVISEYVRYFLHQHTIQLGQPATVKVAANLIRLLAYQNKNMLQAGMIVGGWDKYEGGQI 136
Query: 586 YCIYPHGSVDKLPYATMGSGSLAAMAVFEAGWKRDMNEEE 705
+ + G++ + P+A GSGS + + WK M++EE
Sbjct: 137 FSVPLGGTILRQPFAIGGSGSSYLYGLLDHEWKEGMSQEE 176
>02_05_0884 -
32483735-32483866,32484417-32484491,32484707-32484780,
32485180-32485291,32485476-32485548,32485674-32485729,
32486046-32486122,32486799-32486940
Length = 246
Score = 100 bits (240), Expect = 1e-21
Identities = 51/160 (31%), Positives = 89/160 (55%), Gaps = 1/160 (0%)
Frame = +1
Query: 229 PAPKATKTGTTIVGIIYADGVILGADTRATENTVVSDKNCQKIHYLASNMYCCGAGTAAD 408
P + GTTIVG+ Y GV+L AD+R + V+++ KI L N+Y C +G+AAD
Sbjct: 17 PTSGEHRMGTTIVGVCYDGGVVLAADSRTSTGMYVANRASDKITQLTDNVYICRSGSAAD 76
Query: 409 TEMTTQSVASQLELQRLHTGRTVPVETAATLLKRMLFRYQGHIGAALVLGGVDR-TGPHI 585
T++ + V L + G+ V+ AA L++ + ++ + + A +++GG D+ G I
Sbjct: 77 TQVISDYVRYFLHQHTIQLGQPATVKVAANLIRLLAYQNKNMLQAGMIVGGWDKYEGGQI 136
Query: 586 YCIYPHGSVDKLPYATMGSGSLAAMAVFEAGWKRDMNEEE 705
+ + G++ + P+A GSGS + + WK M++EE
Sbjct: 137 FSVPLGGTILRQPFAIGGSGSSYLYGLLDHEWKEGMSQEE 176
>05_05_0306 -
23977543-23977614,23977709-23977799,23978296-23978361,
23978399-23978479,23979130-23979176,23979408-23979492,
23979570-23979656,23979728-23979801,23980083-23980166,
23980259-23980298,23980386-23980489
Length = 276
Score = 65.3 bits (152), Expect = 4e-11
Identities = 45/158 (28%), Positives = 68/158 (43%), Gaps = 5/158 (3%)
Frame = +1
Query: 232 APKATKTGTTIVGIIYADGVILGADTRATENTVVSDKNCQKIHYLASNMYCCGAGTAADT 411
A KA T+VGI DG++LG + T ++ N +++H + + AG AAD
Sbjct: 27 AGKAVDNSGTVVGIKCKDGIVLGVEKLVTSKMILKGSN-RRLHSVHRHSGLAVAGLAADG 85
Query: 412 EMTTQSVASQLELQRLHTGRTVPVETAATLLKRM-----LFRYQGHIGAALVLGGVDRTG 576
S+ G +PV+ A + L+ + G ++LGG DR G
Sbjct: 86 RQIVSRAKSEAASYEKVYGEPMPVKELADRVASYVHLCTLYWWLRPFGCGVILGGYDRDG 145
Query: 577 PHIYCIYPHGSVDKLPYATMGSGSLAAMAVFEAGWKRD 690
P +Y I P G K A +G G AA G ++D
Sbjct: 146 PQLYMIEPSGLSYKYFGAALGKGRQAAKTCVYDGSRKD 183
>11_06_0394 -
23084485-23084577,23084677-23084802,23085134-23085236,
23085895-23085953,23086418-23086519,23086601-23086714,
23087666-23087746,23088073-23088154,23088504-23088556
Length = 270
Score = 56.4 bits (130), Expect = 2e-08
Identities = 38/162 (23%), Positives = 74/162 (45%), Gaps = 8/162 (4%)
Frame = +1
Query: 232 APKATKTGTTIVGIIYADGVILGADTRATENTVVSDKNCQKIHYLASNMYCCGAGTAADT 411
A +A K G+T +G+ DGV+L + R T + ++ + +KI + ++ C +G AD
Sbjct: 40 AIEAIKLGSTAIGLKTKDGVVLAVEKRVT-SPLLEPSSVEKIMEIDEHIGCAMSGLIADA 98
Query: 412 EMTTQSVASQLELQRLHTGRTVPVETAATLLKRMLFRY-QGH-------IGAALVLGGVD 567
+ + + R G + VE+ + + R+ +G G +L++ G D
Sbjct: 99 RTLVEHARVETQNHRFSYGEPMTVESTTQAICDLALRFGEGDEESMSRPFGVSLLIAGHD 158
Query: 568 RTGPHIYCIYPHGSVDKLPYATMGSGSLAAMAVFEAGWKRDM 693
GP +Y P G+ + +GSGS A + + + + +
Sbjct: 159 ENGPSLYYTDPSGTFWQCNAKAIGSGSEGADSSLQEQYNKSL 200
>01_06_1091 +
34464923-34465026,34465124-34465163,34465245-34465328,
34465457-34465480,34465582-34465655,34465726-34465812,
34465922-34466006,34466215-34466261,34467048-34467113,
34468307-34468397,34468477-34468548
Length = 257
Score = 53.6 bits (123), Expect = 1e-07
Identities = 44/160 (27%), Positives = 66/160 (41%), Gaps = 13/160 (8%)
Frame = +1
Query: 232 APKATKTGTTIVGIIYADGVILGADTRATENTVV--SDKNCQKIHY------LASNMYCC 387
A KA T+VGI DG++LG + T ++ S++ +H+ + N+
Sbjct: 27 ATKAVDNSGTVVGIKCKDGIVLGVEKLVTSKMMLEGSNRRIHSVHWHSGLDIILINVMAV 86
Query: 388 GAGTAADTEMTTQSVASQLELQRLHTGRTVPVETAATLLKRM-----LFRYQGHIGAALV 552
AG AAD S+ G + V+ A + L+ + G ++
Sbjct: 87 -AGLAADGRQIVSRAKSEAASYEKVYGEPISVKELADRVASYVHLCTLYWWLRPFGCGVI 145
Query: 553 LGGVDRTGPHIYCIYPHGSVDKLPYATMGSGSLAAMAVFE 672
LGG DR GP +Y I P G K A +G G AA E
Sbjct: 146 LGGYDRDGPQLYMIEPSGVSYKYFGAALGKGRQAAKTEIE 185
>03_03_0187 +
15253000-15253207,15253281-15253370,15254338-15254402,
15254489-15254535,15255195-15255270,15255432-15255499,
15255793-15255862,15256024-15256109,15256328-15256390,
15256472-15256537,15256938-15256986
Length = 295
Score = 45.2 bits (102), Expect = 5e-05
Identities = 35/149 (23%), Positives = 62/149 (41%), Gaps = 5/149 (3%)
Frame = +1
Query: 274 IYADGVILGADTRATENTVVSDKNCQKIHYLASNMYCCGAGTAADTEMTTQSVASQLELQ 453
+ A+GV++ + + + +V + + QKI L N+ +G D + + Q +
Sbjct: 99 VAANGVVIATEKKLP-SILVDETSVQKIQSLTPNIGVVYSGMGPDFRVLVRKSRKQAQQY 157
Query: 454 RLHTGRTVPV-----ETAATLLKRMLFRYQGHIGAALVLGGVDRTGPHIYCIYPHGSVDK 618
T+PV ETAA + + G +L++ G D GP +Y + P GS
Sbjct: 158 YRLYKETIPVTQLVRETAAVMQEFTQSGGVRPFGVSLLIAGYDDNGPQLYQVDPSGSYFS 217
Query: 619 LPYATMGSGSLAAMAVFEAGWKRDMNEEE 705
+ MG A E + DM ++
Sbjct: 218 WKASAMGKNVSNAKTFLEKRYTEDMELDD 246
>02_05_0057 +
25472872-25472912,25473012-25473157,25474008-25474072,
25474182-25474228,25474922-25474997,25475176-25475243,
25475862-25475931,25476178-25476263,25476418-25476480,
25476556-25476621,25476740-25476788
Length = 258
Score = 44.8 bits (101), Expect = 7e-05
Identities = 35/147 (23%), Positives = 61/147 (41%), Gaps = 5/147 (3%)
Frame = +1
Query: 280 ADGVILGADTRATENTVVSDKNCQKIHYLASNMYCCGAGTAADTEMTTQSVASQLELQRL 459
A+GV++ + + + +V + + QKI L N+ +G D + + Q +
Sbjct: 64 ANGVVIATEKKLP-SILVDETSVQKIQSLTPNIGVVYSGMGPDFRVLVRKSRKQAQQYYR 122
Query: 460 HTGRTVPV-----ETAATLLKRMLFRYQGHIGAALVLGGVDRTGPHIYCIYPHGSVDKLP 624
T+PV ETAA + + G +L++ G D GP +Y + P GS
Sbjct: 123 LYKETIPVTQLVRETAAVMQEFTQSGGVRPFGVSLLIAGYDDNGPQLYQVDPSGSYFSWK 182
Query: 625 YATMGSGSLAAMAVFEAGWKRDMNEEE 705
+ MG A E + DM ++
Sbjct: 183 ASAMGKNVSNAKTFLEKRYTEDMELDD 209
>03_05_0782 - 27658855-27659211,27660417-27660540,27660714-27660871
Length = 212
Score = 44.0 bits (99), Expect = 1e-04
Identities = 36/155 (23%), Positives = 69/155 (44%), Gaps = 7/155 (4%)
Frame = +1
Query: 262 IVGIIYADGVILGADTRATENTVVSDKNCQKIHYLASNMYCCGAGTAADTEMTTQSVASQ 441
++G++ D ++ ADT A ++ +V + K+ L S+ +G D T+ +
Sbjct: 4 VIGVVGRDFAVVAADTSAVQSILVHKTDEDKVMVLDSHKLMGASGEPGDRVQFTEFIQKN 63
Query: 442 LELQRLHTGRTVPVETAATL------LKRMLFRYQGHIGAALVLGGVDR-TGPHIYCIYP 600
L L + +P+ TAAT L L + ++ ++L G D G +Y I
Sbjct: 64 LHLYQFR--NNIPLSTAATANFTRGELATALRKNPYYVN--VLLAGYDSDVGASLYYIDY 119
Query: 601 HGSVDKLPYATMGSGSLAAMAVFEAGWKRDMNEEE 705
+ K+ G GS +++ + ++ DM+ EE
Sbjct: 120 IATFHKIEKGAFGYGSYFCLSLMDKLYRPDMSVEE 154
>09_04_0728 -
19771975-19772093,19772131-19772224,19772322-19772507,
19772596-19772767,19772854-19772983,19773060-19773136,
19774109-19774194,19774508-19774585,19775916-19776045,
19776379-19776423,19776508-19776618,19776801-19777057,
19777153-19777302,19777899-19778008,19778426-19778546
Length = 621
Score = 42.7 bits (96), Expect = 3e-04
Identities = 36/161 (22%), Positives = 75/161 (46%), Gaps = 9/161 (5%)
Frame = +1
Query: 250 TGTTIVGIIYADGVILGADTRATENTVVSDKNCQKIHYLASNMYCCGAGTAAD-TEMTTQ 426
TG++I+ + Y DGVI+ +DT A+ + + K+ ++I + + +G +D E+
Sbjct: 368 TGSSIIALKYKDGVIMASDTGASYGSTLRYKSVERIKAVGKHSLIGASGEFSDFQEILRY 427
Query: 427 SVASQLELQRLHTGRTVPVETAATLLKRMLFRYQGH---IGAALVLGGVDRTGP-----H 582
L G ++ + + L R+++ + + +LV+GGV + GP +
Sbjct: 428 LDELTLSDHMWDDGNSLGPKEVHSYLTRVMYNRRNKFDPLWNSLVIGGV-KKGPKGEEKY 486
Query: 583 IYCIYPHGSVDKLPYATMGSGSLAAMAVFEAGWKRDMNEEE 705
+ + G+ + + G G+ A+ + W+ DM EE
Sbjct: 487 LGMVNMIGTHFEENHIATGFGNHMAIPILRTEWREDMTFEE 527
>09_06_0102 + 20870346-20870518,20870599-20871013,20872180-20872341
Length = 249
Score = 35.9 bits (79), Expect = 0.031
Identities = 36/164 (21%), Positives = 66/164 (40%), Gaps = 7/164 (4%)
Frame = +1
Query: 232 APKATKTGTTIVGIIYADGVILGADTRATENTVVSDKNCQKIHYLASNMYCCGAGTAADT 411
A +A + G VG+ +D V+LG + ++T + ++ +KI L +++ AG AD
Sbjct: 23 ALEAVRKGNAAVGVRGSDTVVLGVEKKSTPK-LQDSRSVRKIASLDTHIALACAGLKADA 81
Query: 412 EMTTQSVASQLELQRLHTGRTVPVETAATLLKRMLFRY--QGHI---GAALVLGGVD--R 570
+ + + RL V VE + + +Y G + G + ++ G D
Sbjct: 82 RVLINRARVECQSHRLTVEDAVTVEYITRYIAGLQQKYTQSGGVRPFGLSTLIVGFDPYT 141
Query: 571 TGPHIYCIYPHGSVDKLPYATMGSGSLAAMAVFEAGWKRDMNEE 702
P +Y P G+ G S + E +K +E
Sbjct: 142 DKPALYQTDPSGTFSAWKANATGRNSNSMREFLEKNYKETSGKE 185
>08_02_1495 + 27526008-27526390,27526462-27526876,27529162-27529323
Length = 319
Score = 34.3 bits (75), Expect = 0.096
Identities = 36/164 (21%), Positives = 65/164 (39%), Gaps = 7/164 (4%)
Frame = +1
Query: 232 APKATKTGTTIVGIIYADGVILGADTRATENTVVSDKNCQKIHYLASNMYCCGAGTAADT 411
A +A + G VG+ D V+LG + ++T + ++ +KI L +++ AG AD
Sbjct: 93 ALEAVRKGNAAVGVRGTDTVVLGVEKKSTPK-LQDSRSMRKIASLDTHIALACAGLKADA 151
Query: 412 EMTTQSVASQLELQRLHTGRTVPVETAATLLKRMLFRY--QGHI---GAALVLGGVD--R 570
+ + + RL V VE + + +Y G + G + ++ G D
Sbjct: 152 RVLINRARVECQSHRLTVEDPVTVEYITRYIAGLQQKYTQSGGVRPFGLSTLIVGFDPYT 211
Query: 571 TGPHIYCIYPHGSVDKLPYATMGSGSLAAMAVFEAGWKRDMNEE 702
P +Y P G+ G S + E +K +E
Sbjct: 212 EKPALYQTDPSGTFSAWKANATGRNSNSMREFLEKNYKDTSGKE 255
>02_01_0268 + 1784781-1785056,1787314-1787394,1787395-1787856
Length = 272
Score = 31.1 bits (67), Expect = 0.89
Identities = 15/45 (33%), Positives = 23/45 (51%)
Frame = +1
Query: 538 GAALVLGGVDRTGPHIYCIYPHGSVDKLPYATMGSGSLAAMAVFE 672
G L++ G+D +G H+Y P G+ + +GS S AA E
Sbjct: 131 GVGLLVAGLDESGAHLYYNCPSGNYFEYQAFAIGSRSQAAKTFLE 175
>09_02_0479 - 9753161-9753171,9755260-9755547,9755883-9756222
Length = 212
Score = 27.9 bits (59), Expect = 8.3
Identities = 10/20 (50%), Positives = 15/20 (75%)
Frame = -2
Query: 503 SSVAAVSTGTVRPVCKRCNS 444
S V +V+T T+RP+C RC +
Sbjct: 79 SPVESVTTATLRPICFRCTN 98
>03_04_0176 - 18123895-18123996,18124169-18124289,18124381-18124430
Length = 90
Score = 27.9 bits (59), Expect = 8.3
Identities = 12/33 (36%), Positives = 17/33 (51%)
Frame = +1
Query: 505 KRMLFRYQGHIGAALVLGGVDRTGPHIYCIYPH 603
K++ F +G L G DRT ++ IYPH
Sbjct: 56 KKVHFVAWNCLGTELASGSTDRTNSRVWRIYPH 88
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,730,169
Number of Sequences: 37544
Number of extensions: 390449
Number of successful extensions: 910
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 880
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 905
length of database: 14,793,348
effective HSP length: 80
effective length of database: 11,789,828
effective search space used: 1815633512
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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