Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmmt24a01
         (650 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z77661-12|CAB01191.1|  381|Caenorhabditis elegans Hypothetical p...    27   8.7  
Z77658-13|CAB01162.1|  381|Caenorhabditis elegans Hypothetical p...    27   8.7  
U58755-10|AAB00699.1| 2761|Caenorhabditis elegans Hypothetical p...    27   8.7  

>Z77661-12|CAB01191.1|  381|Caenorhabditis elegans Hypothetical
           protein F40G12.11 protein.
          Length = 381

 Score = 27.5 bits (58), Expect = 8.7
 Identities = 12/22 (54%), Positives = 15/22 (68%)
 Frame = +1

Query: 505 EDSQLETRLLNSSADRDHVLMK 570
           ED++  TRLLN   DRD +L K
Sbjct: 100 EDTKQSTRLLNEDQDRDTLLKK 121


>Z77658-13|CAB01162.1|  381|Caenorhabditis elegans Hypothetical
           protein F40G12.11 protein.
          Length = 381

 Score = 27.5 bits (58), Expect = 8.7
 Identities = 12/22 (54%), Positives = 15/22 (68%)
 Frame = +1

Query: 505 EDSQLETRLLNSSADRDHVLMK 570
           ED++  TRLLN   DRD +L K
Sbjct: 100 EDTKQSTRLLNEDQDRDTLLKK 121


>U58755-10|AAB00699.1| 2761|Caenorhabditis elegans Hypothetical
           protein C34D4.14 protein.
          Length = 2761

 Score = 27.5 bits (58), Expect = 8.7
 Identities = 16/64 (25%), Positives = 28/64 (43%)
 Frame = -2

Query: 616 GYSSSILHHFLCPFEIS*GHGHDQLSCSITLSLADCLQTHKSYSSFLFHPRLYWKLQSCR 437
           G+ SS LH+  C        G   +SC   +        H  Y+++L H  L+ + + C 
Sbjct: 404 GHKSSSLHYAAC-------FGRPDVSCDANVFRVIRALAHFYYNTYLLHRDLFSRSEHCL 456

Query: 436 QQMM 425
            Q++
Sbjct: 457 SQVV 460


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,654,376
Number of Sequences: 27780
Number of extensions: 197200
Number of successful extensions: 407
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 405
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 407
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1444744186
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)