Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmmt23p19
         (568 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY376088-1|AAQ87980.1|  125|Homo sapiens immunoglobulin E heavy ...    30   6.5  
AY376073-1|AAQ87965.1|  125|Homo sapiens immunoglobulin E heavy ...    30   6.5  
AB029488-1|BAA89482.1|  132|Homo sapiens C11orf21 protein.             29   8.6  

>AY376088-1|AAQ87980.1|  125|Homo sapiens immunoglobulin E heavy
           chain variable region protein.
          Length = 125

 Score = 29.9 bits (64), Expect = 6.5
 Identities = 11/31 (35%), Positives = 18/31 (58%)
 Frame = -2

Query: 189 FCAHADARKPMNRSLYIFGYYSQNITLTISN 97
           +CA A   +P N + Y F Y+ Q   +T+S+
Sbjct: 95  YCARAGPLEPFNWNSYFFDYWGQGTLVTVSS 125


>AY376073-1|AAQ87965.1|  125|Homo sapiens immunoglobulin E heavy
           chain variable region protein.
          Length = 125

 Score = 29.9 bits (64), Expect = 6.5
 Identities = 11/31 (35%), Positives = 18/31 (58%)
 Frame = -2

Query: 189 FCAHADARKPMNRSLYIFGYYSQNITLTISN 97
           +CA A   +P N + Y F Y+ Q   +T+S+
Sbjct: 95  YCARAGPLEPFNWNSYFFDYWGQGTLVTVSS 125


>AB029488-1|BAA89482.1|  132|Homo sapiens C11orf21 protein.
          Length = 132

 Score = 29.5 bits (63), Expect = 8.6
 Identities = 17/37 (45%), Positives = 21/37 (56%)
 Frame = -3

Query: 401 WPHCTSNS*RTPLLGRRRSGTKGHRS*RRQAPGSMEP 291
           WPH +S S   P    R +GT G  S  ++APGSM P
Sbjct: 23  WPHLSSQSGVEP--PDRWTGTPGWPSRDQEAPGSMMP 57


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 82,379,964
Number of Sequences: 237096
Number of extensions: 1564183
Number of successful extensions: 4729
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 4421
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4721
length of database: 76,859,062
effective HSP length: 86
effective length of database: 56,468,806
effective search space used: 5759818212
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)