Bombyx BLAST Result against nematostella

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmmt23p14
         (501 letters)

Database: nematostella 
           59,808 sequences; 16,821,457 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

SB_22693| Best HMM Match : DUF1042 (HMM E-Value=0.00027)               29   2.2  
SB_14988| Best HMM Match : 7tm_1 (HMM E-Value=2.6e-08)                 29   2.8  
SB_31446| Best HMM Match : No HMM Matches (HMM E-Value=.)              28   3.8  
SB_51151| Best HMM Match : Vicilin_N (HMM E-Value=0.19)                28   5.0  
SB_46941| Best HMM Match : No HMM Matches (HMM E-Value=.)              27   6.6  
SB_21060| Best HMM Match : No HMM Matches (HMM E-Value=.)              27   8.7  
SB_58486| Best HMM Match : Vicilin_N (HMM E-Value=1.6)                 27   8.7  

>SB_22693| Best HMM Match : DUF1042 (HMM E-Value=0.00027)
          Length = 2261

 Score = 29.1 bits (62), Expect = 2.2
 Identities = 11/24 (45%), Positives = 15/24 (62%)
 Frame = +3

Query: 366  FKKREQRKKEFVAMWEKEYGKPDE 437
            F KR   K+E+VA W+ EY +  E
Sbjct: 1372 FLKRPDEKQEYVAQWQNEYNEIPE 1395


>SB_14988| Best HMM Match : 7tm_1 (HMM E-Value=2.6e-08)
          Length = 619

 Score = 28.7 bits (61), Expect = 2.8
 Identities = 14/43 (32%), Positives = 20/43 (46%)
 Frame = +3

Query: 30  IPLGVKTHAQKVCSLYKRALRNLEAYYDRRHVYRYQAVLLRER 158
           I LGV        SLY   L N++ Y   +  +RY  ++  ER
Sbjct: 414 IELGVTVKLLGSVSLYNVTLLNIDRYIAMKKAFRYPTIVTNER 456


>SB_31446| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 227

 Score = 28.3 bits (60), Expect = 3.8
 Identities = 17/72 (23%), Positives = 35/72 (48%), Gaps = 8/72 (11%)
 Frame = +3

Query: 246 PIPKYFATSPGGV-AHERVVTPP----DWVLDYWHPLEKAQYPEYFKKREQ---RKKEFV 401
           P+P ++  +  G+  H  V + P    +W   +W  L + +Y E+ KK  +      +F 
Sbjct: 22  PLPAWYDQAKFGIFVHWGVFSVPGFGSEWFWYFWKGLHRPEYVEFMKKNYRPGFSYPDFG 81

Query: 402 AMWEKEYGKPDE 437
            M++ E+  P++
Sbjct: 82  PMFKAEFYDPEQ 93


>SB_51151| Best HMM Match : Vicilin_N (HMM E-Value=0.19)
          Length = 493

 Score = 27.9 bits (59), Expect = 5.0
 Identities = 14/44 (31%), Positives = 22/44 (50%)
 Frame = +3

Query: 270 SPGGVAHERVVTPPDWVLDYWHPLEKAQYPEYFKKREQRKKEFV 401
           SP  +     VT PD   D   P + A   E+ + RE+R+K+ +
Sbjct: 318 SPRSLNSPDSVTSPDGTRDEGKPKKSAAKKEHSRSREERRKKSI 361


>SB_46941| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 231

 Score = 27.5 bits (58), Expect = 6.6
 Identities = 11/26 (42%), Positives = 16/26 (61%)
 Frame = -2

Query: 320 DPIRGSDYTLMSYTSRTCGKIFRYGM 243
           D IRG+ Y L +Y++  C    RYG+
Sbjct: 49  DEIRGNRYILSTYSAAQCVHSLRYGV 74


>SB_21060| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 845

 Score = 27.1 bits (57), Expect = 8.7
 Identities = 21/65 (32%), Positives = 27/65 (41%), Gaps = 4/65 (6%)
 Frame = -1

Query: 243 VASETIPLHPLSETHLL*SYWSPWHACQTSHVTIQLGIGT---HVG-GRSTLLNYVKPFY 76
           V +E IP   +   H+L S  S W  C T    +   I     H G G ST+ +Y    Y
Sbjct: 774 VDTEEIPPEHVWSFHVLRSLSSKWRLCATEDENLPQRINRPLFHGGIGNSTVRSYSADIY 833

Query: 75  KGYRL 61
            G  L
Sbjct: 834 GGANL 838


>SB_58486| Best HMM Match : Vicilin_N (HMM E-Value=1.6)
          Length = 424

 Score = 27.1 bits (57), Expect = 8.7
 Identities = 15/42 (35%), Positives = 23/42 (54%)
 Frame = +1

Query: 334 ILLRKPNILNISRNASKERKSSLLCGRRSMASQMRKISIIRQ 459
           ILLRK  IL IS + +     S L GR+ +  ++++    RQ
Sbjct: 294 ILLRKMQILGISHDDALSLIKSYLSGRKQVCQELQRQGQERQ 335


  Database: nematostella
    Posted date:  Oct 22, 2007  1:22 PM
  Number of letters in database: 16,821,457
  Number of sequences in database:  59,808
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,646,215
Number of Sequences: 59808
Number of extensions: 284118
Number of successful extensions: 809
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 767
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 809
length of database: 16,821,457
effective HSP length: 77
effective length of database: 12,216,241
effective search space used: 1087245449
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)