Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmmt23p07
         (694 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BC020665-1|AAH20665.1|  363|Homo sapiens betaine-homocysteine me...    45   3e-04
AF257473-1|AAG41356.1|  363|Homo sapiens betaine-homocysteine me...    45   3e-04
U50929-1|AAC50668.1|  406|Homo sapiens betaine:homocysteine meth...    44   4e-04
BC012616-1|AAH12616.1|  406|Homo sapiens betaine-homocysteine me...    44   4e-04
AF118378-1|AAD22043.1|  406|Homo sapiens betaine-homocysteine me...    44   4e-04
U75743-1|AAB58906.1| 1265|Homo sapiens methionine synthase protein.    32   2.2  
U73338-1|AAB39704.1| 1265|Homo sapiens methionine synthase protein.    32   2.2  
U71285-1|AAC51188.1| 1265|Homo sapiens 5-methyltetrahydrofolate-...    32   2.2  
BC130616-1|AAI30617.1| 1265|Homo sapiens 5-methyltetrahydrofolat...    32   2.2  
AL359259-1|CAH70983.1| 1265|Homo sapiens 5-methyltetrahydrofolat...    32   2.2  
AL359185-1|CAH73198.1| 1265|Homo sapiens 5-methyltetrahydrofolat...    32   2.2  
K02882-1|AAA52771.1|  429|Homo sapiens immunoglobulin delta-chai...    31   5.2  
K02880-1|AAA52770.1|  383|Homo sapiens immunoglobulin delta-chai...    31   5.2  
BC063384-1|AAH63384.1|  576|Homo sapiens IGHD protein protein.         31   5.2  
BC021276-1|AAH21276.1|  573|Homo sapiens IGHD protein protein.         31   5.2  
AK128658-1|BAC87554.1|  537|Homo sapiens protein ( Homo sapiens ...    31   5.2  
AK128649-1|BAC87548.1|  598|Homo sapiens protein ( Homo sapiens ...    31   5.2  
AK128635-1|BAC87542.1|  538|Homo sapiens protein ( Homo sapiens ...    31   5.2  
AK128625-1|BAC87538.1|  534|Homo sapiens protein ( Homo sapiens ...    31   5.2  
AK128614-1|BAC87529.1|  531|Homo sapiens protein ( Homo sapiens ...    31   5.2  
AK128580-1|BAC87510.1|  526|Homo sapiens protein ( Homo sapiens ...    31   5.2  
AK090461-1|BAC03442.1|  482|Homo sapiens FLJ00382 protein protein.     31   5.2  
BC050463-1|AAH50463.1|  953|Homo sapiens conserved nuclear prote...    30   6.8  
BC001584-1|AAH01584.1|  718|Homo sapiens LOC124245 protein protein.    30   6.8  
AK056632-1|BAB71237.1|  757|Homo sapiens protein ( Homo sapiens ...    30   6.8  

>BC020665-1|AAH20665.1|  363|Homo sapiens betaine-homocysteine
           methyltransferase 2 protein.
          Length = 363

 Score = 44.8 bits (101), Expect = 3e-04
 Identities = 25/68 (36%), Positives = 39/68 (57%)
 Frame = +3

Query: 240 ENTEAPHIVVLDGGFSTQLSCHVGHVIDGDPLWSARFIHTHPNEVVNTHLDFLRAGADLI 419
           E  E+  +V+ DG F   L    G+V  G  LW+   +  HP+ V   H++FLRAG++++
Sbjct: 15  ERLESGEVVIGDGSFLITLEKR-GYVKAG--LWTPEAVIEHPDAVRQLHMEFLRAGSNVM 71

Query: 420 ITNTYQAS 443
            T T+ AS
Sbjct: 72  QTFTFSAS 79


>AF257473-1|AAG41356.1|  363|Homo sapiens betaine-homocysteine
           methyltransferase 2 protein.
          Length = 363

 Score = 44.8 bits (101), Expect = 3e-04
 Identities = 25/68 (36%), Positives = 39/68 (57%)
 Frame = +3

Query: 240 ENTEAPHIVVLDGGFSTQLSCHVGHVIDGDPLWSARFIHTHPNEVVNTHLDFLRAGADLI 419
           E  E+  +V+ DG F   L    G+V  G  LW+   +  HP+ V   H++FLRAG++++
Sbjct: 15  ERLESGEVVIGDGSFLITLEKR-GYVKAG--LWTPEAVIEHPDAVRQLHMEFLRAGSNVM 71

Query: 420 ITNTYQAS 443
            T T+ AS
Sbjct: 72  QTFTFSAS 79


>U50929-1|AAC50668.1|  406|Homo sapiens betaine:homocysteine
           methyltransferase protein.
          Length = 406

 Score = 44.4 bits (100), Expect = 4e-04
 Identities = 35/99 (35%), Positives = 50/99 (50%), Gaps = 3/99 (3%)
 Frame = +3

Query: 240 ENTEAPHIVVLDGGFSTQLSCHVGHVIDGDPLWSARFIHTHPNEVVNTHLDFLRAGADLI 419
           E   A  IV+ DGGF   L    G+V  G   W+      HP  V   H +FLRAG++++
Sbjct: 15  ERLNAGEIVIGDGGFVFALEKR-GYVKAGP--WTPEAAVEHPEAVRQLHREFLRAGSNVM 71

Query: 420 ITNTYQASVEGFVEHLG---VTKEQGYELIARAVQLAKQ 527
            T T+ AS E  +E+ G   + K  G E+   A  +A+Q
Sbjct: 72  QTFTFYAS-EDKLENRGNYVLEKISGQEVNEAACDIARQ 109


>BC012616-1|AAH12616.1|  406|Homo sapiens betaine-homocysteine
           methyltransferase protein.
          Length = 406

 Score = 44.4 bits (100), Expect = 4e-04
 Identities = 35/99 (35%), Positives = 50/99 (50%), Gaps = 3/99 (3%)
 Frame = +3

Query: 240 ENTEAPHIVVLDGGFSTQLSCHVGHVIDGDPLWSARFIHTHPNEVVNTHLDFLRAGADLI 419
           E   A  IV+ DGGF   L    G+V  G   W+      HP  V   H +FLRAG++++
Sbjct: 15  ERLNAGEIVIGDGGFVFALEKR-GYVKAGP--WTPEAAVEHPEAVRQLHREFLRAGSNVM 71

Query: 420 ITNTYQASVEGFVEHLG---VTKEQGYELIARAVQLAKQ 527
            T T+ AS E  +E+ G   + K  G E+   A  +A+Q
Sbjct: 72  QTFTFYAS-EDKLENRGNYVLEKISGQEVNEAACDIARQ 109


>AF118378-1|AAD22043.1|  406|Homo sapiens betaine-homocysteine
           methyltransferase protein.
          Length = 406

 Score = 44.4 bits (100), Expect = 4e-04
 Identities = 35/99 (35%), Positives = 50/99 (50%), Gaps = 3/99 (3%)
 Frame = +3

Query: 240 ENTEAPHIVVLDGGFSTQLSCHVGHVIDGDPLWSARFIHTHPNEVVNTHLDFLRAGADLI 419
           E   A  IV+ DGGF   L    G+V  G   W+      HP  V   H +FLRAG++++
Sbjct: 15  ERLNAGEIVIGDGGFVFALEKR-GYVKAGP--WTPEAAVEHPEAVRQLHREFLRAGSNVM 71

Query: 420 ITNTYQASVEGFVEHLG---VTKEQGYELIARAVQLAKQ 527
            T T+ AS E  +E+ G   + K  G E+   A  +A+Q
Sbjct: 72  QTFTFYAS-EDKLENRGNYVLEKISGQEVNEAACDIARQ 109


>U75743-1|AAB58906.1| 1265|Homo sapiens methionine synthase protein.
          Length = 1265

 Score = 31.9 bits (69), Expect = 2.2
 Identities = 12/29 (41%), Positives = 20/29 (68%)
 Frame = +3

Query: 357 THPNEVVNTHLDFLRAGADLIITNTYQAS 443
           T P+ +   H ++L AGAD+I TNT+ ++
Sbjct: 73  TQPDVIYQIHKEYLLAGADIIETNTFSST 101


>U73338-1|AAB39704.1| 1265|Homo sapiens methionine synthase protein.
          Length = 1265

 Score = 31.9 bits (69), Expect = 2.2
 Identities = 12/29 (41%), Positives = 20/29 (68%)
 Frame = +3

Query: 357 THPNEVVNTHLDFLRAGADLIITNTYQAS 443
           T P+ +   H ++L AGAD+I TNT+ ++
Sbjct: 73  TQPDVIYQIHKEYLLAGADIIETNTFSST 101


>U71285-1|AAC51188.1| 1265|Homo sapiens
           5-methyltetrahydrofolate-homocysteine methyltransferase
           protein.
          Length = 1265

 Score = 31.9 bits (69), Expect = 2.2
 Identities = 12/29 (41%), Positives = 20/29 (68%)
 Frame = +3

Query: 357 THPNEVVNTHLDFLRAGADLIITNTYQAS 443
           T P+ +   H ++L AGAD+I TNT+ ++
Sbjct: 73  TQPDVIYQIHKEYLLAGADIIETNTFSST 101


>BC130616-1|AAI30617.1| 1265|Homo sapiens
           5-methyltetrahydrofolate-homocysteine methyltransferase
           protein.
          Length = 1265

 Score = 31.9 bits (69), Expect = 2.2
 Identities = 12/29 (41%), Positives = 20/29 (68%)
 Frame = +3

Query: 357 THPNEVVNTHLDFLRAGADLIITNTYQAS 443
           T P+ +   H ++L AGAD+I TNT+ ++
Sbjct: 73  TQPDVIYQIHKEYLLAGADIIETNTFSST 101


>AL359259-1|CAH70983.1| 1265|Homo sapiens
           5-methyltetrahydrofolate-homocysteine methyltransferase
           protein.
          Length = 1265

 Score = 31.9 bits (69), Expect = 2.2
 Identities = 12/29 (41%), Positives = 20/29 (68%)
 Frame = +3

Query: 357 THPNEVVNTHLDFLRAGADLIITNTYQAS 443
           T P+ +   H ++L AGAD+I TNT+ ++
Sbjct: 73  TQPDVIYQIHKEYLLAGADIIETNTFSST 101


>AL359185-1|CAH73198.1| 1265|Homo sapiens
           5-methyltetrahydrofolate-homocysteine methyltransferase
           protein.
          Length = 1265

 Score = 31.9 bits (69), Expect = 2.2
 Identities = 12/29 (41%), Positives = 20/29 (68%)
 Frame = +3

Query: 357 THPNEVVNTHLDFLRAGADLIITNTYQAS 443
           T P+ +   H ++L AGAD+I TNT+ ++
Sbjct: 73  TQPDVIYQIHKEYLLAGADIIETNTFSST 101


>K02882-1|AAA52771.1|  429|Homo sapiens immunoglobulin delta-chain
           protein.
          Length = 429

 Score = 30.7 bits (66), Expect = 5.2
 Identities = 11/22 (50%), Positives = 14/22 (63%)
 Frame = -2

Query: 102 EQSETPTRTTHCPKHTRIAGIY 37
           EQ E  T+T  CP HT+  G+Y
Sbjct: 149 EQEERETKTPECPSHTQPLGVY 170


>K02880-1|AAA52770.1|  383|Homo sapiens immunoglobulin delta-chain
           protein.
          Length = 383

 Score = 30.7 bits (66), Expect = 5.2
 Identities = 11/22 (50%), Positives = 14/22 (63%)
 Frame = -2

Query: 102 EQSETPTRTTHCPKHTRIAGIY 37
           EQ E  T+T  CP HT+  G+Y
Sbjct: 149 EQEERETKTPECPSHTQPLGVY 170


>BC063384-1|AAH63384.1|  576|Homo sapiens IGHD protein protein.
          Length = 576

 Score = 30.7 bits (66), Expect = 5.2
 Identities = 11/22 (50%), Positives = 14/22 (63%)
 Frame = -2

Query: 102 EQSETPTRTTHCPKHTRIAGIY 37
           EQ E  T+T  CP HT+  G+Y
Sbjct: 296 EQEERETKTPECPSHTQPLGVY 317


>BC021276-1|AAH21276.1|  573|Homo sapiens IGHD protein protein.
          Length = 573

 Score = 30.7 bits (66), Expect = 5.2
 Identities = 11/22 (50%), Positives = 14/22 (63%)
 Frame = -2

Query: 102 EQSETPTRTTHCPKHTRIAGIY 37
           EQ E  T+T  CP HT+  G+Y
Sbjct: 293 EQEERETKTPECPSHTQPLGVY 314


>AK128658-1|BAC87554.1|  537|Homo sapiens protein ( Homo sapiens
           cDNA FLJ46817 fis, clone TRACH3037505, highly  similar
           to Ig delta chain C region. ).
          Length = 537

 Score = 30.7 bits (66), Expect = 5.2
 Identities = 11/22 (50%), Positives = 14/22 (63%)
 Frame = -2

Query: 102 EQSETPTRTTHCPKHTRIAGIY 37
           EQ E  T+T  CP HT+  G+Y
Sbjct: 299 EQEERETKTPECPSHTQPLGVY 320


>AK128649-1|BAC87548.1|  598|Homo sapiens protein ( Homo sapiens
           cDNA FLJ46808 fis, clone TRACH3034680, moderately
           similar to Ig delta chain C region. ).
          Length = 598

 Score = 30.7 bits (66), Expect = 5.2
 Identities = 11/22 (50%), Positives = 14/22 (63%)
 Frame = -2

Query: 102 EQSETPTRTTHCPKHTRIAGIY 37
           EQ E  T+T  CP HT+  G+Y
Sbjct: 290 EQGERETKTPECPSHTQPLGVY 311


>AK128635-1|BAC87542.1|  538|Homo sapiens protein ( Homo sapiens
           cDNA FLJ46794 fis, clone TRACH3029670, highly  similar
           to Ig delta chain C region. ).
          Length = 538

 Score = 30.7 bits (66), Expect = 5.2
 Identities = 11/22 (50%), Positives = 14/22 (63%)
 Frame = -2

Query: 102 EQSETPTRTTHCPKHTRIAGIY 37
           EQ E  T+T  CP HT+  G+Y
Sbjct: 300 EQEERETKTPECPSHTQPLGVY 321


>AK128625-1|BAC87538.1|  534|Homo sapiens protein ( Homo sapiens
           cDNA FLJ46784 fis, clone TRACH3028441, highly  similar
           to Ig delta chain C region. ).
          Length = 534

 Score = 30.7 bits (66), Expect = 5.2
 Identities = 11/22 (50%), Positives = 14/22 (63%)
 Frame = -2

Query: 102 EQSETPTRTTHCPKHTRIAGIY 37
           EQ E  T+T  CP HT+  G+Y
Sbjct: 296 EQEERETKTPECPSHTQPLGVY 317


>AK128614-1|BAC87529.1|  531|Homo sapiens protein ( Homo sapiens
           cDNA FLJ46773 fis, clone TRACH3026299, highly  similar
           to Ig delta chain C region. ).
          Length = 531

 Score = 30.7 bits (66), Expect = 5.2
 Identities = 11/22 (50%), Positives = 14/22 (63%)
 Frame = -2

Query: 102 EQSETPTRTTHCPKHTRIAGIY 37
           EQ E  T+T  CP HT+  G+Y
Sbjct: 293 EQEERETKTPECPSHTQPLGVY 314


>AK128580-1|BAC87510.1|  526|Homo sapiens protein ( Homo sapiens
           cDNA FLJ46739 fis, clone TRACH3021023, highly  similar
           to Ig delta chain C region. ).
          Length = 526

 Score = 30.7 bits (66), Expect = 5.2
 Identities = 11/22 (50%), Positives = 14/22 (63%)
 Frame = -2

Query: 102 EQSETPTRTTHCPKHTRIAGIY 37
           EQ E  T+T  CP HT+  G+Y
Sbjct: 288 EQEERETKTPECPSHTQPLGVY 309


>AK090461-1|BAC03442.1|  482|Homo sapiens FLJ00382 protein protein.
          Length = 482

 Score = 30.7 bits (66), Expect = 5.2
 Identities = 11/22 (50%), Positives = 14/22 (63%)
 Frame = -2

Query: 102 EQSETPTRTTHCPKHTRIAGIY 37
           EQ E  T+T  CP HT+  G+Y
Sbjct: 233 EQEERETKTPECPSHTQPLGVY 254


>BC050463-1|AAH50463.1|  953|Homo sapiens conserved nuclear protein
           NHN1 protein.
          Length = 953

 Score = 30.3 bits (65), Expect = 6.8
 Identities = 31/88 (35%), Positives = 38/88 (43%), Gaps = 4/88 (4%)
 Frame = +2

Query: 284 LDTAVLPRRACHRR*---STVECSFYPHTSKRSCQYA-SRFFESRG*FNHYQYIPSFSGR 451
           L  +V P RA  RR    S+   S    +S RS  Y+ S    SR   + Y    S S R
Sbjct: 529 LGVSVSPSRARRRRKTSASSASASNSSRSSSRSSSYSGSGSSRSRSRSSSYSSYSSRSSR 588

Query: 452 LRRASGSNERTRL*INSPRSSAR*TSPH 535
               SGS  R+R   +SP  S    SPH
Sbjct: 589 HSSFSGSRSRSRSFSSSPSPSPT-PSPH 615


>BC001584-1|AAH01584.1|  718|Homo sapiens LOC124245 protein protein.
          Length = 718

 Score = 30.3 bits (65), Expect = 6.8
 Identities = 31/88 (35%), Positives = 38/88 (43%), Gaps = 4/88 (4%)
 Frame = +2

Query: 284 LDTAVLPRRACHRR*---STVECSFYPHTSKRSCQYA-SRFFESRG*FNHYQYIPSFSGR 451
           L  +V P RA  RR    S+   S    +S RS  Y+ S    SR   + Y    S S R
Sbjct: 294 LGVSVSPSRARRRRKTSASSASASNSSRSSSRSSSYSGSGSSRSRSRSSSYSSYSSRSSR 353

Query: 452 LRRASGSNERTRL*INSPRSSAR*TSPH 535
               SGS  R+R   +SP  S    SPH
Sbjct: 354 HSSFSGSRSRSRSFSSSPSPSPT-PSPH 380


>AK056632-1|BAB71237.1|  757|Homo sapiens protein ( Homo sapiens
           cDNA FLJ32070 fis, clone OCBBF1000119. ).
          Length = 757

 Score = 30.3 bits (65), Expect = 6.8
 Identities = 31/88 (35%), Positives = 38/88 (43%), Gaps = 4/88 (4%)
 Frame = +2

Query: 284 LDTAVLPRRACHRR*---STVECSFYPHTSKRSCQYA-SRFFESRG*FNHYQYIPSFSGR 451
           L  +V P RA  RR    S+   S    +S RS  Y+ S    SR   + Y    S S R
Sbjct: 497 LGVSVSPSRARRRRKTSASSASASNSSRSSSRSSSYSGSGSSRSRSRSSSYSSYSSRSSR 556

Query: 452 LRRASGSNERTRL*INSPRSSAR*TSPH 535
               SGS  R+R   +SP  S    SPH
Sbjct: 557 HSSFSGSRSRSRSFSSSPSPSPT-PSPH 583


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 105,902,144
Number of Sequences: 237096
Number of extensions: 2396008
Number of successful extensions: 3986
Number of sequences better than 10.0: 25
Number of HSP's better than 10.0 without gapping: 3874
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3986
length of database: 76,859,062
effective HSP length: 88
effective length of database: 55,994,614
effective search space used: 7951235188
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)